BLASTX nr result

ID: Scutellaria24_contig00018237 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00018237
         (681 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004161068.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   209   5e-52
ref|XP_004142988.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   209   5e-52
ref|XP_002510620.1| pentatricopeptide repeat-containing protein,...   206   4e-51
ref|XP_002284799.1| PREDICTED: pentatricopeptide repeat-containi...   205   6e-51
ref|XP_003610363.1| Pentatricopeptide repeat-containing protein ...   201   1e-49

>ref|XP_004161068.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At2g33680-like [Cucumis sativus]
          Length = 710

 Score =  209 bits (531), Expect = 5e-52
 Identities = 103/136 (75%), Positives = 117/136 (86%)
 Frame = +2

Query: 2   LGRAGKLLEAKEFIESATIDHGLYLWRILLSASRNHRNYELGSYAGEKLVELGSQESSAY 181
           L RAGKL E KEFIESATIDHG+ LWRILL A RN+RNYELG+YAGEKL+ELGSQESSAY
Sbjct: 563 LSRAGKLHETKEFIESATIDHGMCLWRILLGACRNYRNYELGAYAGEKLMELGSQESSAY 622

Query: 182 VLLSSIYSALGRLDDVERVRRIMSNRGISKEPGCSWIELKNKVHVFVVGDMLHPEIKDIR 361
           +LLSSIY+ALGR DDVERVRR+M  RG++KEPGCSWIELK++VHVFVVGD +HP+I  I 
Sbjct: 623 ILLSSIYTALGRSDDVERVRRLMKLRGVNKEPGCSWIELKSQVHVFVVGDQIHPQIVKIC 682

Query: 362 GELWRFSNVMKDELYE 409
            EL R  + MKDE YE
Sbjct: 683 SELRRLRDHMKDECYE 698


>ref|XP_004142988.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At2g33680-like [Cucumis sativus]
          Length = 692

 Score =  209 bits (531), Expect = 5e-52
 Identities = 103/136 (75%), Positives = 117/136 (86%)
 Frame = +2

Query: 2   LGRAGKLLEAKEFIESATIDHGLYLWRILLSASRNHRNYELGSYAGEKLVELGSQESSAY 181
           L RAGKL E KEFIESATIDHG+ LWRILL A RN+RNYELG+YAGEKL+ELGSQESSAY
Sbjct: 545 LSRAGKLHETKEFIESATIDHGMCLWRILLGACRNYRNYELGAYAGEKLMELGSQESSAY 604

Query: 182 VLLSSIYSALGRLDDVERVRRIMSNRGISKEPGCSWIELKNKVHVFVVGDMLHPEIKDIR 361
           +LLSSIY+ALGR DDVERVRR+M  RG++KEPGCSWIELK++VHVFVVGD +HP+I  I 
Sbjct: 605 ILLSSIYTALGRSDDVERVRRLMKLRGVNKEPGCSWIELKSQVHVFVVGDQIHPQIVKIC 664

Query: 362 GELWRFSNVMKDELYE 409
            EL R  + MKDE YE
Sbjct: 665 SELRRLRDHMKDECYE 680


>ref|XP_002510620.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223551321|gb|EEF52807.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 708

 Score =  206 bits (523), Expect = 4e-51
 Identities = 103/136 (75%), Positives = 115/136 (84%)
 Frame = +2

Query: 2   LGRAGKLLEAKEFIESATIDHGLYLWRILLSASRNHRNYELGSYAGEKLVELGSQESSAY 181
           L RAGKL EAKEFIES TIDHGL LWRILL A RN+RNYELG+YAGEKL+ELGSQESSAY
Sbjct: 561 LSRAGKLYEAKEFIESTTIDHGLCLWRILLGACRNYRNYELGAYAGEKLMELGSQESSAY 620

Query: 182 VLLSSIYSALGRLDDVERVRRIMSNRGISKEPGCSWIELKNKVHVFVVGDMLHPEIKDIR 361
           VLLS IY+ALGR +DVERVR +M  RG+SKEPGCSWIELK+ VHVFVVGD +HP I +IR
Sbjct: 621 VLLSGIYTALGRPEDVERVRSMMKVRGVSKEPGCSWIELKSNVHVFVVGDQMHPCIGEIR 680

Query: 362 GELWRFSNVMKDELYE 409
            E+ R S  MKDE Y+
Sbjct: 681 TEILRLSKQMKDEGYQ 696


>ref|XP_002284799.1| PREDICTED: pentatricopeptide repeat-containing protein At2g33680
           [Vitis vinifera] gi|302141693|emb|CBI18896.3| unnamed
           protein product [Vitis vinifera]
          Length = 703

 Score =  205 bits (522), Expect = 6e-51
 Identities = 105/141 (74%), Positives = 117/141 (82%)
 Frame = +2

Query: 2   LGRAGKLLEAKEFIESATIDHGLYLWRILLSASRNHRNYELGSYAGEKLVELGSQESSAY 181
           L RAGKL EA EF ESATIDHG+ LWRI+L A RN+RNYELG+YAGEKL+ELGSQESSAY
Sbjct: 558 LSRAGKLKEAIEFTESATIDHGMCLWRIILGACRNYRNYELGAYAGEKLMELGSQESSAY 617

Query: 182 VLLSSIYSALGRLDDVERVRRIMSNRGISKEPGCSWIELKNKVHVFVVGDMLHPEIKDIR 361
           VLLSSIYSALGR +DVERVRR+M  RG+SKEPGCSWIELK+ VHVFVV D +HP+I DI 
Sbjct: 618 VLLSSIYSALGRWEDVERVRRMMKLRGVSKEPGCSWIELKSGVHVFVVKDQMHPQIGDIH 677

Query: 362 GELWRFSNVMKDELYELECDS 424
            EL + S  MKDE YE   DS
Sbjct: 678 VELRQLSKQMKDEGYEPATDS 698


>ref|XP_003610363.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
            gi|355511418|gb|AES92560.1| Pentatricopeptide
            repeat-containing protein [Medicago truncatula]
          Length = 734

 Score =  201 bits (510), Expect = 1e-49
 Identities = 108/169 (63%), Positives = 128/169 (75%), Gaps = 3/169 (1%)
 Frame = +2

Query: 2    LGRAGKLLEAKEFIESATIDHGLYLWRILLSASRNHRNYELGSYAGEKLVELGSQESSAY 181
            L RAGKL EAKEFIESAT+DHGL LWRILL A +NHRNYELG YAGEKLVELGS ESSAY
Sbjct: 568  LSRAGKLNEAKEFIESATVDHGLCLWRILLGACKNHRNYELGVYAGEKLVELGSPESSAY 627

Query: 182  VLLSSIYSALGRLDDVERVRRIMSNRGISKEPGCSWIELKNKVHVFVVGDMLHPEIKDIR 361
            VLLSSIY+ALG  ++VERVRRIM  RG++KEPGCSWIELK  VHVFVVGD  HP++ +IR
Sbjct: 628  VLLSSIYTALGDRENVERVRRIMKARGVNKEPGCSWIELKGLVHVFVVGDNQHPQVDEIR 687

Query: 362  GELWRFSNVMKDELYELECDSIVEE*KLVKQL---QPSFVDQVSLCGSI 499
             EL   + +M DE Y+   D + E   ++  L   + S   Q+S+CG +
Sbjct: 688  LELELLTKLMIDEGYQPLLDRLPE--TVIDNLTDQEGSDEIQISVCGGL 734


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