BLASTX nr result

ID: Scutellaria24_contig00018145 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00018145
         (668 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002867118.1| hypothetical protein ARALYDRAFT_912943 [Arab...    88   1e-15
gb|ABK28664.1| unknown [Arabidopsis thaliana]                          82   9e-14
ref|XP_003612227.1| SKP1-like protein [Medicago truncatula] gi|1...    82   9e-14
ref|NP_567959.1| S-phase kinase-associated protein 1 [Arabidopsi...    82   9e-14
gb|AAD34458.1| Skp1 [Medicago sativa]                                  82   1e-13

>ref|XP_002867118.1| hypothetical protein ARALYDRAFT_912943 [Arabidopsis lyrata subsp.
           lyrata] gi|297312954|gb|EFH43377.1| hypothetical protein
           ARALYDRAFT_912943 [Arabidopsis lyrata subsp. lyrata]
          Length = 152

 Score = 88.2 bits (217), Expect = 1e-15
 Identities = 47/121 (38%), Positives = 68/121 (56%), Gaps = 1/121 (0%)
 Frame = +3

Query: 3   FEVEEAVFMEFRAI-HGGAQHSGGGAIPLSQVSGGTLAKVIDYCKKHVDHKLNPLPNDEI 179
           FEVEEAV ++ + I H          IPL+ V+  TLAKVI+YCKKH   + NP+  DE+
Sbjct: 16  FEVEEAVAIQSQTIAHMVEDDCAANGIPLANVTSKTLAKVIEYCKKHHVDEANPISEDEL 75

Query: 180 NSWDSNFXXXXXXXXXXXXXASHFLGVKDLFNLTCLSISEMIKRKTPGERSNIDQLRALF 359
             WD+ F             A+++L +K L +LTC +I++MIK K P E   +  ++  F
Sbjct: 76  KKWDTEFMETDQSTIFDLILAANYLNIKSLLDLTCQTIADMIKGKNPEEIRTLFNIKNDF 135

Query: 360 T 362
           T
Sbjct: 136 T 136


>gb|ABK28664.1| unknown [Arabidopsis thaliana]
          Length = 153

 Score = 82.0 bits (201), Expect = 9e-14
 Identities = 42/109 (38%), Positives = 62/109 (56%), Gaps = 1/109 (0%)
 Frame = +3

Query: 3   FEVEEAVFMEFRAI-HGGAQHSGGGAIPLSQVSGGTLAKVIDYCKKHVDHKLNPLPNDEI 179
           FEVEEAV ++ + I H          IPL+ V    L KVI+YCKKH   + NP+  +++
Sbjct: 16  FEVEEAVAIQSQTIAHMVEDDCVADGIPLANVESKILVKVIEYCKKHHVDEANPISEEDL 75

Query: 180 NSWDSNFXXXXXXXXXXXXXASHFLGVKDLFNLTCLSISEMIKRKTPGE 326
           N+WD  F             A+++L +K L +LTC ++++MIK KTP E
Sbjct: 76  NNWDEKFMDLEQSTIFELILAANYLNIKSLLDLTCQTVADMIKGKTPEE 124


>ref|XP_003612227.1| SKP1-like protein [Medicago truncatula] gi|109255190|gb|ABG27020.1|
           SKP1-like b [Medicago truncatula]
           gi|217071548|gb|ACJ84134.1| unknown [Medicago
           truncatula] gi|217075170|gb|ACJ85945.1| unknown
           [Medicago truncatula] gi|355513562|gb|AES95185.1|
           SKP1-like protein [Medicago truncatula]
           gi|388502012|gb|AFK39072.1| unknown [Medicago
           truncatula]
          Length = 155

 Score = 82.0 bits (201), Expect = 9e-14
 Identities = 48/111 (43%), Positives = 64/111 (57%), Gaps = 3/111 (2%)
 Frame = +3

Query: 3   FEVEEAVFMEFRAI-HGGAQHSGGGAIPLSQVSGGTLAKVIDYCKKHVDHKL-NPLPN-D 173
           FEV+EAV +E + I H          IPL  V+   LAKVI+YCKKHVD       PN D
Sbjct: 17  FEVDEAVALESQTIKHMIEDDCADSGIPLPNVTSKILAKVIEYCKKHVDAAAAEEKPNED 76

Query: 174 EINSWDSNFXXXXXXXXXXXXXASHFLGVKDLFNLTCLSISEMIKRKTPGE 326
           E+ SWDS F             A+++L +K+L +LTC ++++MIK KTP E
Sbjct: 77  ELKSWDSEFVKVDQATLFDLILAANYLNIKNLLDLTCQTVADMIKGKTPEE 127


>ref|NP_567959.1| S-phase kinase-associated protein 1 [Arabidopsis thaliana]
           gi|75098745|sp|O49484.1|ASK11_ARATH RecName:
           Full=SKP1-like protein 11; Short=AtSK11
           gi|2911041|emb|CAA17551.1| kinetochore (SKP1p)-like
           protein [Arabidopsis thaliana]
           gi|7270371|emb|CAB80138.1| kinetochore (SKP1p)-like
           protein [Arabidopsis thaliana]
           gi|91806766|gb|ABE66110.1| E3 ubiquitin ligase SCF
           complex subunit SKP1/ASK1 [Arabidopsis thaliana]
           gi|332660940|gb|AEE86340.1| S-phase kinase-associated
           protein 1 [Arabidopsis thaliana]
          Length = 152

 Score = 82.0 bits (201), Expect = 9e-14
 Identities = 42/109 (38%), Positives = 62/109 (56%), Gaps = 1/109 (0%)
 Frame = +3

Query: 3   FEVEEAVFMEFRAI-HGGAQHSGGGAIPLSQVSGGTLAKVIDYCKKHVDHKLNPLPNDEI 179
           FEVEEAV ++ + I H          IPL+ V    L KVI+YCKKH   + NP+  +++
Sbjct: 16  FEVEEAVAIQSQTIAHMVEDDCVADGIPLANVESKILVKVIEYCKKHHVDEANPISEEDL 75

Query: 180 NSWDSNFXXXXXXXXXXXXXASHFLGVKDLFNLTCLSISEMIKRKTPGE 326
           N+WD  F             A+++L +K L +LTC ++++MIK KTP E
Sbjct: 76  NNWDEKFMDLEQSTIFELILAANYLNIKSLLDLTCQTVADMIKGKTPEE 124


>gb|AAD34458.1| Skp1 [Medicago sativa]
          Length = 153

 Score = 81.6 bits (200), Expect = 1e-13
 Identities = 48/111 (43%), Positives = 63/111 (56%), Gaps = 3/111 (2%)
 Frame = +3

Query: 3   FEVEEAVFMEFRAI-HGGAQHSGGGAIPLSQVSGGTLAKVIDYCKKHVDHKL-NPLPN-D 173
           FEV+EAV +E + I H          IPL  V+   LAKVI+YCKKHVD       PN D
Sbjct: 15  FEVDEAVALESQTIKHMIEDDCADSGIPLPNVTSKILAKVIEYCKKHVDAAAAEDKPNED 74

Query: 174 EINSWDSNFXXXXXXXXXXXXXASHFLGVKDLFNLTCLSISEMIKRKTPGE 326
           E+ SWDS F             A+++L +K L +LTC ++++MIK KTP E
Sbjct: 75  ELKSWDSEFVKVDQATLFDLILAANYLNIKSLLDLTCQTVADMIKGKTPEE 125


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