BLASTX nr result

ID: Scutellaria24_contig00018085 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00018085
         (1059 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274158.1| PREDICTED: pentatricopeptide repeat-containi...    80   1e-12
ref|XP_004160754.1| PREDICTED: pentatricopeptide repeat-containi...    65   4e-08
ref|XP_004138557.1| PREDICTED: pentatricopeptide repeat-containi...    65   4e-08
ref|XP_002310674.1| predicted protein [Populus trichocarpa] gi|2...    62   2e-07
emb|CBI25399.3| unnamed protein product [Vitis vinifera]               61   4e-07

>ref|XP_002274158.1| PREDICTED: pentatricopeptide repeat-containing protein At2g27610-like
            [Vitis vinifera]
          Length = 820

 Score = 79.7 bits (195), Expect = 1e-12
 Identities = 34/52 (65%), Positives = 40/52 (76%)
 Frame = -3

Query: 1057 WISVKGRVHKFHAGDTDHPQKDHIYAKLEELRRHVKSQGYVPDLKYALQGEE 902
            WISVKGRVHKF++GD  HPQK  IY KLEELR  +K+ GYVPDL+Y L   +
Sbjct: 769  WISVKGRVHKFYSGDQQHPQKKEIYVKLEELREKIKAMGYVPDLRYVLNNAD 820


>ref|XP_004160754.1| PREDICTED: pentatricopeptide repeat-containing protein At2g27610-like
            [Cucumis sativus]
          Length = 766

 Score = 64.7 bits (156), Expect = 4e-08
 Identities = 30/48 (62%), Positives = 35/48 (72%)
 Frame = -3

Query: 1057 WISVKGRVHKFHAGDTDHPQKDHIYAKLEELRRHVKSQGYVPDLKYAL 914
            WISV G +HKF+AGD  HP+KD IYAKLEEL+  + S   VPDL Y L
Sbjct: 719  WISVNGTLHKFYAGDQQHPEKDKIYAKLEELKLKLISLDDVPDLSYEL 766


>ref|XP_004138557.1| PREDICTED: pentatricopeptide repeat-containing protein At2g27610-like
            [Cucumis sativus]
          Length = 766

 Score = 64.7 bits (156), Expect = 4e-08
 Identities = 30/48 (62%), Positives = 35/48 (72%)
 Frame = -3

Query: 1057 WISVKGRVHKFHAGDTDHPQKDHIYAKLEELRRHVKSQGYVPDLKYAL 914
            WISV G +HKF+AGD  HP+KD IYAKLEEL+  + S   VPDL Y L
Sbjct: 719  WISVNGTLHKFYAGDQQHPEKDKIYAKLEELKLKLISLDDVPDLSYEL 766


>ref|XP_002310674.1| predicted protein [Populus trichocarpa] gi|222853577|gb|EEE91124.1|
            predicted protein [Populus trichocarpa]
          Length = 908

 Score = 62.4 bits (150), Expect = 2e-07
 Identities = 25/49 (51%), Positives = 34/49 (69%)
 Frame = -3

Query: 1057 WISVKGRVHKFHAGDTDHPQKDHIYAKLEELRRHVKSQGYVPDLKYALQ 911
            W+ +K ++  F  GD  HPQ   IYAKLEEL++ +K  GY+PD+ YALQ
Sbjct: 778  WVKLKNKLSLFGMGDHSHPQASEIYAKLEELKKMIKEAGYIPDISYALQ 826


>emb|CBI25399.3| unnamed protein product [Vitis vinifera]
          Length = 846

 Score = 61.2 bits (147), Expect = 4e-07
 Identities = 26/37 (70%), Positives = 30/37 (81%)
 Frame = -3

Query: 1057 WISVKGRVHKFHAGDTDHPQKDHIYAKLEELRRHVKS 947
            WISVKGRVHKF++GD  HPQK  IY KLEELR  +K+
Sbjct: 715  WISVKGRVHKFYSGDQQHPQKKEIYVKLEELREKIKA 751


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