BLASTX nr result

ID: Scutellaria24_contig00018004 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00018004
         (306 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002533325.1| FACT complex subunit SPT16, putative [Ricinu...   139   2e-31
ref|XP_003553020.1| PREDICTED: FACT complex subunit SPT16-like [...   139   3e-31
ref|XP_003552890.1| PREDICTED: FACT complex subunit SPT16-like [...   139   3e-31
ref|XP_003538372.1| PREDICTED: FACT complex subunit SPT16-like i...   139   3e-31
ref|XP_003538371.1| PREDICTED: FACT complex subunit SPT16-like [...   139   3e-31

>ref|XP_002533325.1| FACT complex subunit SPT16, putative [Ricinus communis]
            gi|223526847|gb|EEF29061.1| FACT complex subunit SPT16,
            putative [Ricinus communis]
          Length = 1050

 Score =  139 bits (350), Expect = 2e-31
 Identities = 64/85 (75%), Positives = 71/85 (83%)
 Frame = +3

Query: 3    KDFKRDVMRIDSIPTSSLDGIKEWLDTTDLKYYESRLNLNWRQILKTITDDPEQFIEDGG 182
            KDFKRDV+RIDSIP++SLDGIKEWLDTTD+KYYES+LNLNWRQILKTITDDP+ FI+DGG
Sbjct: 873  KDFKRDVLRIDSIPSTSLDGIKEWLDTTDIKYYESKLNLNWRQILKTITDDPQSFIDDGG 932

Query: 183  WEFLNLEAXXXXXXXXXXXXXGYEP 257
            WEFLNLEA             GYEP
Sbjct: 933  WEFLNLEASDSDSDNTEDSDKGYEP 957


>ref|XP_003553020.1| PREDICTED: FACT complex subunit SPT16-like [Glycine max]
          Length = 1068

 Score =  139 bits (349), Expect = 3e-31
 Identities = 65/85 (76%), Positives = 70/85 (82%)
 Frame = +3

Query: 3    KDFKRDVMRIDSIPTSSLDGIKEWLDTTDLKYYESRLNLNWRQILKTITDDPEQFIEDGG 182
            KDFKRDV+RIDSIP++SLDGIKEWLDTTD+KYYESRLNLNWRQILKTITDDP+ FIE GG
Sbjct: 890  KDFKRDVLRIDSIPSTSLDGIKEWLDTTDIKYYESRLNLNWRQILKTITDDPQSFIEGGG 949

Query: 183  WEFLNLEAXXXXXXXXXXXXXGYEP 257
            WEFLNLEA             GYEP
Sbjct: 950  WEFLNLEATDSESENSEESDKGYEP 974


>ref|XP_003552890.1| PREDICTED: FACT complex subunit SPT16-like [Glycine max]
          Length = 1064

 Score =  139 bits (349), Expect = 3e-31
 Identities = 65/85 (76%), Positives = 70/85 (82%)
 Frame = +3

Query: 3    KDFKRDVMRIDSIPTSSLDGIKEWLDTTDLKYYESRLNLNWRQILKTITDDPEQFIEDGG 182
            KDFKRDV+RIDSIP++SLDGIKEWLDTTD+KYYESRLNLNWRQILKTITDDP+ FIE GG
Sbjct: 887  KDFKRDVLRIDSIPSTSLDGIKEWLDTTDIKYYESRLNLNWRQILKTITDDPQSFIEGGG 946

Query: 183  WEFLNLEAXXXXXXXXXXXXXGYEP 257
            WEFLNLEA             GYEP
Sbjct: 947  WEFLNLEATDSESENSEESDKGYEP 971


>ref|XP_003538372.1| PREDICTED: FACT complex subunit SPT16-like isoform 1 [Glycine max]
            gi|356539783|ref|XP_003538373.1| PREDICTED: FACT complex
            subunit SPT16-like isoform 2 [Glycine max]
          Length = 1069

 Score =  139 bits (349), Expect = 3e-31
 Identities = 65/85 (76%), Positives = 70/85 (82%)
 Frame = +3

Query: 3    KDFKRDVMRIDSIPTSSLDGIKEWLDTTDLKYYESRLNLNWRQILKTITDDPEQFIEDGG 182
            KDFKRDV+RIDSIP++SLDGIKEWLDTTD+KYYESRLNLNWRQILKTITDDP+ FIE GG
Sbjct: 890  KDFKRDVLRIDSIPSTSLDGIKEWLDTTDIKYYESRLNLNWRQILKTITDDPQSFIEGGG 949

Query: 183  WEFLNLEAXXXXXXXXXXXXXGYEP 257
            WEFLNLEA             GYEP
Sbjct: 950  WEFLNLEATDSESENSEESDKGYEP 974


>ref|XP_003538371.1| PREDICTED: FACT complex subunit SPT16-like [Glycine max]
          Length = 1068

 Score =  139 bits (349), Expect = 3e-31
 Identities = 65/85 (76%), Positives = 70/85 (82%)
 Frame = +3

Query: 3    KDFKRDVMRIDSIPTSSLDGIKEWLDTTDLKYYESRLNLNWRQILKTITDDPEQFIEDGG 182
            KDFKRDV+RIDSIP++SLDGIKEWLDTTD+KYYESRLNLNWRQILKTITDDP+ FIE GG
Sbjct: 890  KDFKRDVLRIDSIPSTSLDGIKEWLDTTDIKYYESRLNLNWRQILKTITDDPQSFIEGGG 949

Query: 183  WEFLNLEAXXXXXXXXXXXXXGYEP 257
            WEFLNLEA             GYEP
Sbjct: 950  WEFLNLEATDSESENSEESDKGYEP 974


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