BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00017991
         (732 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAM63455.1| unknown [Arabidopsis thaliana]                         140   2e-31
ref|NP_567594.1| RNA recognition motif-containing protein [Arabi...   140   3e-31
ref|XP_002869951.1| hypothetical protein ARALYDRAFT_492869 [Arab...   135   9e-30
ref|XP_004134540.1| PREDICTED: multiple RNA-binding domain-conta...   131   2e-28
ref|XP_002533421.1| RNA binding protein, putative [Ricinus commu...   128   1e-27

>gb|AAM63455.1| unknown [Arabidopsis thaliana]
          Length = 152

 Score =  140 bits (354), Expect = 2e-31
 Identities = 71/146 (48%), Positives = 102/146 (69%), Gaps = 3/146 (2%)
 Frame = -3

Query: 712 SFLLHSSSSTIITAQIYPKLASSRIHASNSVNYPLASKVIVRNLPFSTSESRILKEFAKY 533
           SF+  SSS      + +PK+ +S        NYPLASK++VRNLPFSTSE  + +EF+ +
Sbjct: 10  SFVASSSSLPNYRNRRFPKIKASLF------NYPLASKIMVRNLPFSTSEDFLKREFSAF 63

Query: 532 GQIAEVKLVKDEARNKSKGFAFIQYTSQEEALLAIESMDYQLFDDRQVFVEIAKPRKNDF 353
           G+IAEVKL+KDEA  +SKG+AFIQ+TSQ++A LAIE+MD ++++ R ++++IAKP K DF
Sbjct: 64  GEIAEVKLIKDEAMQRSKGYAFIQFTSQDDAFLAIETMDRRMYNGRMIYIDIAKPGKRDF 123

Query: 352 GGYPTTLGPPQDQ---HKVTKDDIDD 284
            G P T GPP+      +   D++ D
Sbjct: 124 QGLPRTSGPPEKSDVPEEAANDEVAD 149


>ref|NP_567594.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
           gi|51971865|dbj|BAD44597.1| putative protein
           [Arabidopsis thaliana] gi|107738041|gb|ABF83619.1|
           At4g20030 [Arabidopsis thaliana]
           gi|332658864|gb|AEE84264.1| RNA recognition
           motif-containing protein [Arabidopsis thaliana]
          Length = 152

 Score =  140 bits (353), Expect = 3e-31
 Identities = 71/146 (48%), Positives = 102/146 (69%), Gaps = 3/146 (2%)
 Frame = -3

Query: 712 SFLLHSSSSTIITAQIYPKLASSRIHASNSVNYPLASKVIVRNLPFSTSESRILKEFAKY 533
           SF+  SSS        +PK+ +S        NYPLASK++VRNLPFSTSE  + +EF+ +
Sbjct: 10  SFVASSSSLPNYRNLRFPKIKASLF------NYPLASKIMVRNLPFSTSEDFLKREFSAF 63

Query: 532 GQIAEVKLVKDEARNKSKGFAFIQYTSQEEALLAIESMDYQLFDDRQVFVEIAKPRKNDF 353
           G+IAEVKL+KDEA  +SKG+AFIQ+TSQ++A LAIE+MD ++++ R ++++IAKP K DF
Sbjct: 64  GEIAEVKLIKDEAMKRSKGYAFIQFTSQDDAFLAIETMDRRMYNGRMIYIDIAKPGKRDF 123

Query: 352 GGYPTTLGPPQ---DQHKVTKDDIDD 284
            G P T GPP+   +  +   D++ D
Sbjct: 124 QGLPRTSGPPEKSDEPEEAANDEVAD 149


>ref|XP_002869951.1| hypothetical protein ARALYDRAFT_492869 [Arabidopsis lyrata subsp.
           lyrata] gi|297315787|gb|EFH46210.1| hypothetical protein
           ARALYDRAFT_492869 [Arabidopsis lyrata subsp. lyrata]
          Length = 152

 Score =  135 bits (340), Expect = 9e-30
 Identities = 66/131 (50%), Positives = 96/131 (73%)
 Frame = -3

Query: 712 SFLLHSSSSTIITAQIYPKLASSRIHASNSVNYPLASKVIVRNLPFSTSESRILKEFAKY 533
           SF+  SS+      + +PK  +S        NYPLASK++VRNLPFSTSE  + +EF+ +
Sbjct: 10  SFVASSSALPNYRNRRFPKSKASLF------NYPLASKIMVRNLPFSTSEDFLKREFSAF 63

Query: 532 GQIAEVKLVKDEARNKSKGFAFIQYTSQEEALLAIESMDYQLFDDRQVFVEIAKPRKNDF 353
           G+IAEVKL++DE+  +SKG+AFIQ+TSQ++A LAIE+MD ++++ R ++++IAKP K DF
Sbjct: 64  GEIAEVKLIRDESMKRSKGYAFIQFTSQDDAFLAIETMDRRMYNGRMIYIDIAKPGKRDF 123

Query: 352 GGYPTTLGPPQ 320
            G P T GPP+
Sbjct: 124 QGLPRTSGPPE 134


>ref|XP_004134540.1| PREDICTED: multiple RNA-binding domain-containing protein 1-like
           isoform 1 [Cucumis sativus]
           gi|449490646|ref|XP_004158665.1| PREDICTED: multiple
           RNA-binding domain-containing protein 1-like isoform 1
           [Cucumis sativus]
          Length = 158

 Score =  131 bits (329), Expect = 2e-28
 Identities = 64/139 (46%), Positives = 97/139 (69%), Gaps = 13/139 (9%)
 Frame = -3

Query: 661 PKLASSRIHASNSVN---------YPLASKVIVRNLPFSTSESRILKEFAKYGQIAEVKL 509
           P   ++R+ ASN ++         YPLAS+++VRNLP+ST+ESR+ +EF+ +G+IAEV L
Sbjct: 17  PIFPNNRLVASNRISLNLRASFFDYPLASRLMVRNLPYSTNESRLQEEFSNFGEIAEVLL 76

Query: 508 VKDEARNKSKGFAFIQYTSQEEALLAIESMDYQLFDDRQVFVEIAKPRKNDFGGYPTTLG 329
            KD +  + KG+AFIQYT Q++A+LA+E+MD ++FD R ++VEIA P    FGGYP   G
Sbjct: 77  AKDRSTKRPKGYAFIQYTCQDDAMLALETMDCKIFDGRMIYVEIATPGSGSFGGYPRASG 136

Query: 328 PPQ----DQHKVTKDDIDD 284
           PP+    ++  V ++D+ D
Sbjct: 137 PPKERPNERANVDQEDVAD 155


>ref|XP_002533421.1| RNA binding protein, putative [Ricinus communis]
           gi|223526734|gb|EEF28964.1| RNA binding protein,
           putative [Ricinus communis]
          Length = 152

 Score =  128 bits (321), Expect = 1e-27
 Identities = 61/120 (50%), Positives = 88/120 (73%)
 Frame = -3

Query: 643 RIHASNSVNYPLASKVIVRNLPFSTSESRILKEFAKYGQIAEVKLVKDEARNKSKGFAFI 464
           R   S++ N+PLAS++IV+NL +S  ES + KEF+ +G+IAEVKLVKD+ R +SK F FI
Sbjct: 31  RASFSSTSNFPLASRIIVKNLGYSVGESSLQKEFSNFGEIAEVKLVKDDERKRSKAFVFI 90

Query: 463 QYTSQEEALLAIESMDYQLFDDRQVFVEIAKPRKNDFGGYPTTLGPPQDQHKVTKDDIDD 284
           QYT Q++A+LA+E+MD ++FD R ++V++AKP K  F GYP   GPP   H   +D++ D
Sbjct: 91  QYTCQDDAILAMENMDRKIFDGRLIYVDLAKPGKETFRGYPKASGPP-PLHLREQDEVAD 149