BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00017904
         (733 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003634411.1| PREDICTED: replication factor C subunit 4 [V...   266   4e-69
ref|XP_002285875.1| PREDICTED: replication factor C subunit 4 is...   266   4e-69
ref|XP_002285874.1| PREDICTED: replication factor C subunit 4 is...   266   4e-69
emb|CAN83520.1| hypothetical protein VITISV_019805 [Vitis vinifera]   266   4e-69
ref|XP_002520330.1| replication factor C / DNA polymerase III ga...   258   9e-67

>ref|XP_003634411.1| PREDICTED: replication factor C subunit 4 [Vitis vinifera]
          Length = 334

 Score =  266 bits (679), Expect = 4e-69
 Identities = 137/170 (80%), Positives = 153/170 (90%)
 Frame = -2

Query: 732 PLTEEIMTTRILYICKEEGLNLDSEALSTLSSISQGDLRRAITYLQGAARLFGSLISSKD 553
           PL+EEIM++RIL+ICKEE LNLDSEALSTLSSISQGDLRRAITYLQGAARLFGS+ISSKD
Sbjct: 166 PLSEEIMSSRILHICKEEELNLDSEALSTLSSISQGDLRRAITYLQGAARLFGSIISSKD 225

Query: 552 LISVSGVIPDDVVQALFSACRSGNFDSADKEVKNVIAEGYPASQMLSQLHDVIVESDDLS 373
           LISVSGV+P  VVQALF+AC+SG+FDSA+KEV NVIAEGYP SQML QL DV+VE+ D+S
Sbjct: 226 LISVSGVVPQHVVQALFAACKSGDFDSANKEVNNVIAEGYPVSQMLYQLFDVVVEA-DIS 284

Query: 372 DEQKARTCKKFAEADKCLTEGADEYLQLLDVASTTMRAINNMPHEFPFGS 223
           DEQKAR CK+ AEADKCL +GADEYLQLLDVAS  MRA+ NMP EFP  S
Sbjct: 285 DEQKARICKRLAEADKCLVDGADEYLQLLDVASNAMRALCNMPEEFPHES 334


>ref|XP_002285875.1| PREDICTED: replication factor C subunit 4 isoform 2 [Vitis
           vinifera]
          Length = 329

 Score =  266 bits (679), Expect = 4e-69
 Identities = 137/170 (80%), Positives = 153/170 (90%)
 Frame = -2

Query: 732 PLTEEIMTTRILYICKEEGLNLDSEALSTLSSISQGDLRRAITYLQGAARLFGSLISSKD 553
           PL+EEIM++RIL+ICKEE LNLDSEALSTLSSISQGDLRRAITYLQGAARLFGS+ISSKD
Sbjct: 161 PLSEEIMSSRILHICKEEELNLDSEALSTLSSISQGDLRRAITYLQGAARLFGSIISSKD 220

Query: 552 LISVSGVIPDDVVQALFSACRSGNFDSADKEVKNVIAEGYPASQMLSQLHDVIVESDDLS 373
           LISVSGV+P  VVQALF+AC+SG+FDSA+KEV NVIAEGYP SQML QL DV+VE+ D+S
Sbjct: 221 LISVSGVVPQHVVQALFAACKSGDFDSANKEVNNVIAEGYPVSQMLYQLFDVVVEA-DIS 279

Query: 372 DEQKARTCKKFAEADKCLTEGADEYLQLLDVASTTMRAINNMPHEFPFGS 223
           DEQKAR CK+ AEADKCL +GADEYLQLLDVAS  MRA+ NMP EFP  S
Sbjct: 280 DEQKARICKRLAEADKCLVDGADEYLQLLDVASNAMRALCNMPEEFPHES 329


>ref|XP_002285874.1| PREDICTED: replication factor C subunit 4 isoform 1 [Vitis
           vinifera] gi|302141781|emb|CBI18984.3| unnamed protein
           product [Vitis vinifera]
          Length = 341

 Score =  266 bits (679), Expect = 4e-69
 Identities = 137/170 (80%), Positives = 153/170 (90%)
 Frame = -2

Query: 732 PLTEEIMTTRILYICKEEGLNLDSEALSTLSSISQGDLRRAITYLQGAARLFGSLISSKD 553
           PL+EEIM++RIL+ICKEE LNLDSEALSTLSSISQGDLRRAITYLQGAARLFGS+ISSKD
Sbjct: 173 PLSEEIMSSRILHICKEEELNLDSEALSTLSSISQGDLRRAITYLQGAARLFGSIISSKD 232

Query: 552 LISVSGVIPDDVVQALFSACRSGNFDSADKEVKNVIAEGYPASQMLSQLHDVIVESDDLS 373
           LISVSGV+P  VVQALF+AC+SG+FDSA+KEV NVIAEGYP SQML QL DV+VE+ D+S
Sbjct: 233 LISVSGVVPQHVVQALFAACKSGDFDSANKEVNNVIAEGYPVSQMLYQLFDVVVEA-DIS 291

Query: 372 DEQKARTCKKFAEADKCLTEGADEYLQLLDVASTTMRAINNMPHEFPFGS 223
           DEQKAR CK+ AEADKCL +GADEYLQLLDVAS  MRA+ NMP EFP  S
Sbjct: 292 DEQKARICKRLAEADKCLVDGADEYLQLLDVASNAMRALCNMPEEFPHES 341


>emb|CAN83520.1| hypothetical protein VITISV_019805 [Vitis vinifera]
          Length = 341

 Score =  266 bits (679), Expect = 4e-69
 Identities = 137/170 (80%), Positives = 153/170 (90%)
 Frame = -2

Query: 732 PLTEEIMTTRILYICKEEGLNLDSEALSTLSSISQGDLRRAITYLQGAARLFGSLISSKD 553
           PL+EEIM++RIL+ICKEE LNLDSEALSTLSSISQGDLRRAITYLQGAARLFGS+ISSKD
Sbjct: 173 PLSEEIMSSRILHICKEEELNLDSEALSTLSSISQGDLRRAITYLQGAARLFGSIISSKD 232

Query: 552 LISVSGVIPDDVVQALFSACRSGNFDSADKEVKNVIAEGYPASQMLSQLHDVIVESDDLS 373
           LISVSGV+P  VVQALF+AC+SG+FDSA+KEV NVIAEGYP SQML QL DV+VE+ D+S
Sbjct: 233 LISVSGVVPQHVVQALFAACKSGDFDSANKEVNNVIAEGYPVSQMLYQLFDVVVEA-DIS 291

Query: 372 DEQKARTCKKFAEADKCLTEGADEYLQLLDVASTTMRAINNMPHEFPFGS 223
           DEQKAR CK+ AEADKCL +GADEYLQLLDVAS  MRA+ NMP EFP  S
Sbjct: 292 DEQKARICKRLAEADKCLVDGADEYLQLLDVASNAMRALCNMPEEFPHES 341


>ref|XP_002520330.1| replication factor C / DNA polymerase III gamma-tau subunit,
           putative [Ricinus communis] gi|223540549|gb|EEF42116.1|
           replication factor C / DNA polymerase III gamma-tau
           subunit, putative [Ricinus communis]
          Length = 342

 Score =  258 bits (659), Expect = 9e-67
 Identities = 127/170 (74%), Positives = 150/170 (88%)
 Frame = -2

Query: 732 PLTEEIMTTRILYICKEEGLNLDSEALSTLSSISQGDLRRAITYLQGAARLFGSLISSKD 553
           PL+EEIM++R+L+IC+EEGLNLD+EALSTLS +SQGDLRRAITYLQGAARL+GS ISSKD
Sbjct: 173 PLSEEIMSSRVLHICREEGLNLDAEALSTLSYVSQGDLRRAITYLQGAARLYGSTISSKD 232

Query: 552 LISVSGVIPDDVVQALFSACRSGNFDSADKEVKNVIAEGYPASQMLSQLHDVIVESDDLS 373
           LISVSGVIP + V AL++ACRSG+FD A+KEV N+IAEGYP SQML QL +V+VE+DD+S
Sbjct: 233 LISVSGVIPQEAVGALYAACRSGDFDMANKEVNNIIAEGYPVSQMLVQLLEVVVEADDIS 292

Query: 372 DEQKARTCKKFAEADKCLTEGADEYLQLLDVASTTMRAINNMPHEFPFGS 223
           DEQKA+ CK    ADKCL +GADEYLQLLDVAS TMRA+ NMP EFP+ S
Sbjct: 293 DEQKAQICKSLGAADKCLVDGADEYLQLLDVASNTMRALCNMPQEFPYES 342