BLASTX nr result

ID: Scutellaria24_contig00017857 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00017857
         (454 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002311433.1| predicted protein [Populus trichocarpa] gi|2...   122   2e-26
ref|XP_002524402.1| DNA binding protein, putative [Ricinus commu...   120   2e-25
ref|XP_002315961.1| predicted protein [Populus trichocarpa] gi|2...   118   6e-25
ref|XP_002278697.1| PREDICTED: transcription factor bHLH30 [Viti...   115   5e-24
emb|CBI27073.3| unnamed protein product [Vitis vinifera]              112   4e-23

>ref|XP_002311433.1| predicted protein [Populus trichocarpa] gi|222851253|gb|EEE88800.1|
           predicted protein [Populus trichocarpa]
          Length = 352

 Score =  122 bits (307), Expect = 2e-26
 Identities = 73/132 (55%), Positives = 81/132 (61%), Gaps = 20/132 (15%)
 Frame = -3

Query: 389 VQQMHQQSNSDAYIGMAGGGGSTLTFPEVSQMLPWTLPPVHTFN------------QDPF 246
           +QQ HQQ +SD Y G  G G   L FPEVS +LPW LPP H+FN             DPF
Sbjct: 32  MQQHHQQQSSDIYGGARGSG---LIFPEVSPILPWPLPPAHSFNPDHFTSNHPVRDHDPF 88

Query: 245 LLSPP---SYRG-----TSGLQFGYDGASSDHQLRLISESLGQVVHPSPAAFGLHAELQK 90
           L+ PP   SY G     +  LQF YDG SSDH LR+ISE+LG VV P  A FGL AEL  
Sbjct: 89  LIPPPIPSSYGGLFNRRSPSLQFAYDGTSSDH-LRIISETLGPVVQPGSAPFGLQAELSN 147

Query: 89  MTAQEFMDAKAL 54
           MTAQE MDAKAL
Sbjct: 148 MTAQEIMDAKAL 159


>ref|XP_002524402.1| DNA binding protein, putative [Ricinus communis]
           gi|223536363|gb|EEF38013.1| DNA binding protein,
           putative [Ricinus communis]
          Length = 367

 Score =  120 bits (300), Expect = 2e-25
 Identities = 72/140 (51%), Positives = 81/140 (57%), Gaps = 28/140 (20%)
 Frame = -3

Query: 389 VQQMHQQSNSDAYIGMAGGGGSTLTFPEVSQMLPWTLPPVHTFN---------------- 258
           +Q  HQQ  SD Y G A GG S L FPEVS +LPW LPPVH+FN                
Sbjct: 31  MQHQHQQQTSDMY-GGARGGSSGLIFPEVSPILPWPLPPVHSFNPAMTQFPSNQVHHHHH 89

Query: 257 ----QDPFLLSPP---SY-----RGTSGLQFGYDGASSDHQLRLISESLGQVVHPSPAAF 114
                DPFL+ PP   SY     R    LQF YDG+SS   LR+I+++LG VV P  A F
Sbjct: 90  HRDHHDPFLIPPPVPSSYGNLFNRRAPALQFAYDGSSSHDHLRIITDTLGPVVQPGSAPF 149

Query: 113 GLHAELQKMTAQEFMDAKAL 54
           GL AEL KMTAQE MDAKAL
Sbjct: 150 GLQAELGKMTAQEIMDAKAL 169


>ref|XP_002315961.1| predicted protein [Populus trichocarpa] gi|222865001|gb|EEF02132.1|
           predicted protein [Populus trichocarpa]
          Length = 359

 Score =  118 bits (295), Expect = 6e-25
 Identities = 71/132 (53%), Positives = 79/132 (59%), Gaps = 20/132 (15%)
 Frame = -3

Query: 389 VQQMHQQSNSDAYIGMAGGGGSTLTFPEVSQMLPWTLPPVHTFN------------QDPF 246
           +QQ  QQ +SD Y G  G G     FPEVS +LPW LPPVH+FN             DPF
Sbjct: 34  MQQHQQQQSSDIYGGARGSG---FIFPEVSPILPWPLPPVHSFNPAHFTPNHPVRDHDPF 90

Query: 245 LLSPP---SYRG-----TSGLQFGYDGASSDHQLRLISESLGQVVHPSPAAFGLHAELQK 90
           L+ PP   SY G        LQF YDG  SDH LR+IS++LG VV P  A FGL AEL K
Sbjct: 91  LIPPPVPSSYGGLFNRRAPSLQFAYDGTPSDH-LRIISDTLGPVVQPGSAPFGLQAELSK 149

Query: 89  MTAQEFMDAKAL 54
           MTAQE MDAKAL
Sbjct: 150 MTAQEIMDAKAL 161


>ref|XP_002278697.1| PREDICTED: transcription factor bHLH30 [Vitis vinifera]
          Length = 349

 Score =  115 bits (287), Expect = 5e-24
 Identities = 72/134 (53%), Positives = 83/134 (61%), Gaps = 21/134 (15%)
 Frame = -3

Query: 392 LVQQMHQ--QSNSDAYIGMAGGGGSTLTFPEVSQML-PWTLPPVHTFN-----------Q 255
           L+QQ HQ  Q N+DAY G  GGG S L FPEVS +L PW+ PPVH FN            
Sbjct: 27  LLQQHHQMQQQNNDAYGG--GGGRSGLIFPEVSPILQPWSFPPVHAFNPAHFAANPVRDH 84

Query: 254 DPFLLSPPSY-------RGTSGLQFGYDGASSDHQLRLISESLGQVVHPSPAAFGLHAEL 96
           DPFL+ PP         R    LQF Y+G SS+H LR+IS++LG VV P  + FGL AEL
Sbjct: 85  DPFLVPPPPSAYGSVFNRRAPALQFAYEGPSSEH-LRIISDTLGPVVQPGSSPFGLQAEL 143

Query: 95  QKMTAQEFMDAKAL 54
            KMTAQE MDAKAL
Sbjct: 144 GKMTAQEIMDAKAL 157


>emb|CBI27073.3| unnamed protein product [Vitis vinifera]
          Length = 316

 Score =  112 bits (279), Expect = 4e-23
 Identities = 68/126 (53%), Positives = 78/126 (61%), Gaps = 19/126 (15%)
 Frame = -3

Query: 374 QQSNSDAYIGMAGGGGSTLTFPEVSQML-PWTLPPVHTFN-----------QDPFLLSPP 231
           QQ N+DAY G  GGG S L FPEVS +L PW+ PPVH FN            DPFL+ PP
Sbjct: 2   QQQNNDAYGG--GGGRSGLIFPEVSPILQPWSFPPVHAFNPAHFAANPVRDHDPFLVPPP 59

Query: 230 SY-------RGTSGLQFGYDGASSDHQLRLISESLGQVVHPSPAAFGLHAELQKMTAQEF 72
                    R    LQF Y+G SS+H LR+IS++LG VV P  + FGL AEL KMTAQE 
Sbjct: 60  PSAYGSVFNRRAPALQFAYEGPSSEH-LRIISDTLGPVVQPGSSPFGLQAELGKMTAQEI 118

Query: 71  MDAKAL 54
           MDAKAL
Sbjct: 119 MDAKAL 124


Top