BLASTX nr result

ID: Scutellaria24_contig00017663 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00017663
         (447 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283237.1| PREDICTED: putative pentatricopeptide repeat...    69   3e-10
ref|XP_002317451.1| predicted protein [Populus trichocarpa] gi|2...    68   9e-10
ref|XP_004173107.1| PREDICTED: putative pentatricopeptide repeat...    65   6e-09
ref|XP_004146077.1| PREDICTED: putative pentatricopeptide repeat...    65   6e-09
ref|XP_002529336.1| pentatricopeptide repeat-containing protein,...    60   2e-07

>ref|XP_002283237.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g53330-like [Vitis vinifera]
          Length = 464

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 40/87 (45%), Positives = 53/87 (60%), Gaps = 2/87 (2%)
 Frame = +2

Query: 2   FDGFCDTKQFKEAASILDEMIFMGYAPHSSSLTKYLDELMLWRNKGLL-TCMFMLVKRNS 178
           FDG C+  QF EAA ILDEM+F GYAP S+S TK+++ L    N  LL   +  LVK N 
Sbjct: 366 FDGLCEGMQFNEAAFILDEMVFKGYAPKSASKTKFVEALCQEGNLELLCKVLNSLVKGNV 425

Query: 179 VDRYVWRLVTSLLC-KDGYSDADELLN 256
           +D   W L  S +C K+  S+  EL++
Sbjct: 426 IDGDAWSLAVSKVCKKEKLSNGSELVD 452


>ref|XP_002317451.1| predicted protein [Populus trichocarpa] gi|222860516|gb|EEE98063.1|
           predicted protein [Populus trichocarpa]
          Length = 461

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 39/91 (42%), Positives = 58/91 (63%), Gaps = 2/91 (2%)
 Frame = +2

Query: 2   FDGFCDTKQFKEAASILDEMIFMGYAPHSSSLTKYLDELMLWRNKGLLTCMF-MLVKRNS 178
           FDGFC+  QFKEAA ILDEMIF G+ P S+S+ K+++ L   +N+ LL   F  L K   
Sbjct: 368 FDGFCNGMQFKEAAFILDEMIFKGFVPCSASICKFVNRLCEGKNEDLLRSAFNTLEKGKL 427

Query: 179 VDRYVWRLVTSLLCKDG-YSDADELLNRLIN 268
           V+  +WR+  +++ KD   S +  L++ LI+
Sbjct: 428 VNVDLWRMAVAMVFKDDKLSSSFNLVDSLID 458


>ref|XP_004173107.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g53330-like [Cucumis sativus]
          Length = 394

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 35/90 (38%), Positives = 52/90 (57%), Gaps = 1/90 (1%)
 Frame = +2

Query: 2   FDGFCDTKQFKEAASILDEMIFMGYAPHSSSLTKYLDELMLWRNKGLLTCMF-MLVKRNS 178
           FDG C+  Q KEA SILDEMIF GY P + S+ K +D L    N  LL  +   L + N 
Sbjct: 305 FDGLCEMMQLKEATSILDEMIFKGYVPRNESINKLVDRLCQECNMELLWMILNSLGRGNR 364

Query: 179 VDRYVWRLVTSLLCKDGYSDADELLNRLIN 268
           ++  +W  V + + K+  S++  L++ LI+
Sbjct: 365 MNMDMWARVVAFVYKENLSESSNLIDSLIS 394


>ref|XP_004146077.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g53330-like [Cucumis sativus]
          Length = 527

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 35/90 (38%), Positives = 52/90 (57%), Gaps = 1/90 (1%)
 Frame = +2

Query: 2   FDGFCDTKQFKEAASILDEMIFMGYAPHSSSLTKYLDELMLWRNKGLLTCMF-MLVKRNS 178
           FDG C+  Q KEA SILDEMIF GY P + S+ K +D L    N  LL  +   L + N 
Sbjct: 438 FDGLCEMMQLKEATSILDEMIFKGYVPRNESINKLVDRLCQECNMELLWMILNSLGRGNR 497

Query: 179 VDRYVWRLVTSLLCKDGYSDADELLNRLIN 268
           ++  +W  V + + K+  S++  L++ LI+
Sbjct: 498 MNMDMWARVVAFVYKENLSESSNLIDSLIS 527


>ref|XP_002529336.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223531207|gb|EEF33053.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 610

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 32/82 (39%), Positives = 50/82 (60%), Gaps = 7/82 (8%)
 Frame = +2

Query: 2   FDGFCDTKQFKEAASILDEMIFMGYAPHSSSLTKYL-------DELMLWRNKGLLTCMFM 160
           FDG  D  +FK+AA ILDEM+F G+AP SSS+ K++       DE ++W    +L C   
Sbjct: 370 FDGLSDAMEFKDAAFILDEMVFKGFAPRSSSICKFINRLCQNGDEDLVW---SVLNC--- 423

Query: 161 LVKRNSVDRYVWRLVTSLLCKD 226
           L K N++D  +W++  ++  K+
Sbjct: 424 LGKINAIDTELWKMAIAVALKN 445


Top