BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00017653
         (926 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002303484.1| predicted protein [Populus trichocarpa] gi|2...   230   3e-58
ref|XP_002265193.1| PREDICTED: cleavage stimulation factor subun...   229   9e-58
ref|XP_002519397.1| plant RNA cleavage stimulation factor, putat...   209   1e-51
ref|XP_003555072.1| PREDICTED: cleavage stimulation factor subun...   200   3e-49
ref|XP_004165274.1| PREDICTED: LOW QUALITY PROTEIN: cleavage sti...   198   2e-48

>ref|XP_002303484.1| predicted protein [Populus trichocarpa] gi|222840916|gb|EEE78463.1|
            predicted protein [Populus trichocarpa]
          Length = 769

 Score =  230 bits (587), Expect = 3e-58
 Identities = 129/233 (55%), Positives = 168/233 (72%), Gaps = 21/233 (9%)
 Frame = -2

Query: 925  PCSTKDLDHLARQEWLSKNLNKKIENSVPANGPSSADRSISDIPNNSNMFGKIVYPDVSR 746
            PCS+KDLDHLARQEWL+KN+NKK E S  +NGP++ D+  + + +NSN+ GK++YPD S+
Sbjct: 521  PCSSKDLDHLARQEWLAKNINKKAEKSAVSNGPATLDKIPAGLASNSNVSGKVIYPDTSQ 580

Query: 745  MVIYGPTQK------PGTPASVLPVASSTLPNGLITGATTATNDMLKALPPSLAAFVANL 584
             VIY P QK      P T AS    AS+ L N  I  A    +++LKA PP+L +F+ANL
Sbjct: 581  TVIYDPRQKLEAGIPPSTTASGFKAASNPLSNP-IGLAPNVFDEVLKATPPALISFLANL 639

Query: 583  PAVEGPSPDVDFVISICLQSNVP-SATGKSVTQQ----PAPSTSDLSGSTKYK------- 440
            P VEGP+P+VD V+SICLQS+VP   TGKS T Q      P+TSDLSGS++ +       
Sbjct: 640  PVVEGPAPNVDIVLSICLQSDVPVGKTGKSGTTQTPMLSGPATSDLSGSSRSRPVPSGSS 699

Query: 439  -QSRDRQSGGKRKDSDRQDDDETSTVQSQPLPRDAFKIRQLQKAR--ATSSRT 290
             ++RDRQS GKRKD DRQ++DET+TVQSQPLPRD F+IRQ+QK+R  AT+S+T
Sbjct: 700  FKTRDRQS-GKRKDRDRQEEDETATVQSQPLPRDVFRIRQIQKSRAAATTSQT 751


>ref|XP_002265193.1| PREDICTED: cleavage stimulation factor subunit 3 [Vitis vinifera]
            gi|297736046|emb|CBI24084.3| unnamed protein product
            [Vitis vinifera]
          Length = 769

 Score =  229 bits (583), Expect = 9e-58
 Identities = 130/235 (55%), Positives = 159/235 (67%), Gaps = 23/235 (9%)
 Frame = -2

Query: 925  PCSTKDLDHLARQEWLSKNLNKKIENSVPANGPSSADRSISDIPNNSNMFGKIVYPDVSR 746
            PCS++DLDHLARQEWL+KN+NKK+E S    G  S ++S S    NSN   K+ YPD S+
Sbjct: 518  PCSSRDLDHLARQEWLAKNINKKVEKSAILKGVGSTEKSASGFTTNSNPATKVFYPDTSQ 577

Query: 745  MVIYGPTQKPG------TPASVLPVASSTLPNGLI----TGATTATNDMLKALPPSLAAF 596
            MV+Y P QKPG      T A VLP  S TL N  +    +      +++LK+ PP+L AF
Sbjct: 578  MVVYDPRQKPGTGALPSTTAPVLPSISGTLSNPSVPMVSSRPANPLDEILKSTPPALVAF 637

Query: 595  VANLPAVEGPSPDVDFVISICLQSNVPSA-TGKS--VTQQPAPSTSDLSGSTK------- 446
            +ANLPAVEGPSPDVD V+SICLQSNV +  TG S  +   P PSTSDLSGS+K       
Sbjct: 638  IANLPAVEGPSPDVDVVLSICLQSNVSTGQTGLSTQLAAGPVPSTSDLSGSSKSHPVPSG 697

Query: 445  --YKQSRDRQSGGKRKDSDRQDDDETSTVQSQPLPRDAFKIRQLQKAR-ATSSRT 290
              +K  RDRQ  GKRKD DRQ+DDET+T QS PLPRD FKIRQ++KAR  T+S+T
Sbjct: 698  SSFKPMRDRQP-GKRKDLDRQEDDETATAQSLPLPRDVFKIRQIRKARGGTTSQT 751


>ref|XP_002519397.1| plant RNA cleavage stimulation factor, putative [Ricinus communis]
            gi|223541464|gb|EEF43014.1| plant RNA cleavage
            stimulation factor, putative [Ricinus communis]
          Length = 767

 Score =  209 bits (531), Expect = 1e-51
 Identities = 118/232 (50%), Positives = 154/232 (66%), Gaps = 20/232 (8%)
 Frame = -2

Query: 925  PCSTKDLDHLARQEWLSKNLNKKIENSVPANGPSSADRSISDIPNNSNMFGKIVYPDVSR 746
            PCS+KDLDHLARQEWL+KN++KK+E S  +NG    DR  + + +NS +  K++YPD S 
Sbjct: 519  PCSSKDLDHLARQEWLAKNISKKMEKSTISNGLGILDRVSTGLKSNSAVSAKVIYPDTSS 578

Query: 745  MVIYGPTQKPGTPASVLPVA---------SSTLPNGLITGATTATNDMLKALPPSLAAFV 593
            M IY P QK     S+   A         SS    GL+     A +++LKA PP+L +F+
Sbjct: 579  MAIYEPRQKHEVGISLSTTATGFGSASNPSSNTIVGLVGSGANAFDEILKATPPALISFL 638

Query: 592  ANLPAVEGPSPDVDFVISICLQSNVPS------ATGKSVTQQPAPSTSDLSGSTK----Y 443
            + LP VEGP+P+VD V+SICLQS + +       T  +V   PAP+TSDLSGS+K     
Sbjct: 639  STLPTVEGPTPNVDIVLSICLQSELTNGQMGKLGTSPAVPAPPAPATSDLSGSSKSRPVL 698

Query: 442  KQSRDRQSGGKRKDSDRQDDDETSTVQSQPLPRDAFKIRQLQKAR-ATSSRT 290
            K SRDRQS GKRKD +RQ++DET+TVQSQPLPRD F+IR  QKAR  T+S+T
Sbjct: 699  KPSRDRQS-GKRKDIERQEEDETATVQSQPLPRDIFRIRHSQKARVGTASQT 749


>ref|XP_003555072.1| PREDICTED: cleavage stimulation factor subunit 3-like [Glycine max]
          Length = 832

 Score =  200 bits (509), Expect = 3e-49
 Identities = 118/242 (48%), Positives = 153/242 (63%), Gaps = 32/242 (13%)
 Frame = -2

Query: 925  PCSTKDLDHLARQEWLSKNLNKKIENSVPANGPSSADRSISDIPNNSNMFGKIVYPDVSR 746
            PCS+ DLDHLARQ+WL+KN+NKK+E S+  NG +  D++   + + S M  KIVYPD S+
Sbjct: 575  PCSSNDLDHLARQQWLAKNINKKVEKSILPNGTTLLDKT--SMASISTMPSKIVYPDTSK 632

Query: 745  MVIYGPTQKPGTPASVLPVASSTLPNGLITGA-TTATNDMLKALPPSLAAFVANLPAVEG 569
            MVIY P   PG            L   L+ GA T A +++LKA PP+L +F+ANLPAVEG
Sbjct: 633  MVIYDPKHTPGRCGKPKEHLGPCLIQLLVAGAGTNAFDEILKATPPALVSFLANLPAVEG 692

Query: 568  PSPDVDFVISICLQSNVPSATGKSVT---------------------QQPAPSTSDLSGS 452
            P P+VD V+SICLQS++P  TG+SV                        PA + S+LSGS
Sbjct: 693  PMPNVDIVLSICLQSDLP--TGQSVKTGIPTQVQSGKAGIPALLPAGSAPAAAASELSGS 750

Query: 451  TK----------YKQSRDRQSGGKRKDSDRQDDDETSTVQSQPLPRDAFKIRQLQKARAT 302
            +K           K   +RQ G KRK+ DRQD+D+T+TVQSQPLPRDAF+IRQ QKARA+
Sbjct: 751  SKSHPAPSGGVSLKPGSNRQYG-KRKEPDRQDEDDTTTVQSQPLPRDAFRIRQYQKARAS 809

Query: 301  SS 296
            S+
Sbjct: 810  SA 811


>ref|XP_004165274.1| PREDICTED: LOW QUALITY PROTEIN: cleavage stimulation factor subunit
           3-like [Cucumis sativus]
          Length = 460

 Score =  198 bits (503), Expect = 2e-48
 Identities = 115/233 (49%), Positives = 159/233 (68%), Gaps = 21/233 (9%)
 Frame = -2

Query: 925 PCSTKDLDHLARQEWLSKNLNKKIENSVPANGPSSADRSISDIPNNSNMFGKIVYPDVSR 746
           PC++ DLD+L RQEWL+KN++K  E S    G    D   +   ++S    K+VYPD S+
Sbjct: 212 PCTSSDLDNLTRQEWLAKNISKNSEKSSLPGGTGFLDTGSAGFMSHSIPSTKVVYPDTSQ 271

Query: 745 MVIYGPTQ----KPGTPASVLPVASSTLPNGLITGATTAT-NDMLKALPPSLAAFVANLP 581
           MVIY P+Q     P   AS LP A+ + P  + +GA T+  +++LKA P +L AF+ANLP
Sbjct: 272 MVIYDPSQILGILPTATASGLP-ANPSNPVSVASGAPTSVFDEILKATPAALIAFLANLP 330

Query: 580 AVEGPSPDVDFVISICLQSNVPS-------ATGKSVTQQPAPSTSDLSGSTK-------- 446
           AV+GP+PDVD V+S+CL+S++P+       AT   V+  P P+TSDLSGS+K        
Sbjct: 331 AVDGPTPDVDIVLSVCLESDLPTVPLVKSGATPAQVSGGPVPTTSDLSGSSKSHAFSNSS 390

Query: 445 YKQSRDRQSGGKRKDSDRQDDDETSTVQSQPLPRDAFKIRQLQKAR-ATSSRT 290
            K +RD+QS GKRKD DRQ+D+E++TVQSQP+P+D F+IRQ+QKAR ATSS+T
Sbjct: 391 LKHTRDKQS-GKRKDYDRQEDNESTTVQSQPMPKDXFRIRQIQKARGATSSQT 442