BLASTX nr result

ID: Scutellaria24_contig00017358 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00017358
         (358 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267809.2| PREDICTED: pentatricopeptide repeat-containi...   148   4e-34
emb|CAN69960.1| hypothetical protein VITISV_032887 [Vitis vinifera]   148   4e-34
ref|NP_973481.1| pentatricopeptide repeat-containing protein [Ar...   129   3e-28
ref|NP_565422.1| pentatricopeptide repeat-containing protein [Ar...   129   3e-28
ref|XP_002884075.1| pentatricopeptide repeat-containing protein ...   129   3e-28

>ref|XP_002267809.2| PREDICTED: pentatricopeptide repeat-containing protein
           At2g17670-like [Vitis vinifera]
          Length = 458

 Score =  148 bits (374), Expect = 4e-34
 Identities = 71/120 (59%), Positives = 92/120 (76%), Gaps = 1/120 (0%)
 Frame = +1

Query: 1   VKKHPPFCPNRFTYHILLTQSCSSPDEESLTNVHNVLNLMSNSGFPPNQVSTDVAVRALC 180
           +K  P F P R TYHILL+QSC SP+ + L+ VH  LNLM   GFPP++V+TD+AVR+LC
Sbjct: 189 IKSQPSFSPERSTYHILLSQSCKSPNSD-LSAVHQTLNLMVTHGFPPDRVTTDIAVRSLC 247

Query: 181 GCGREEHAIELVKELCAKNSPPDTYTYNFMVRHLVKNRSIDTVNCFIKDMR-EFGIKPDL 357
             GREEHAIELVKEL  K+SPPD++TYNF++RHL K R++ TV  FI +++  F +KPDL
Sbjct: 248 SAGREEHAIELVKELSLKHSPPDSFTYNFIIRHLCKTRALSTVYNFIDELQNSFQLKPDL 307


>emb|CAN69960.1| hypothetical protein VITISV_032887 [Vitis vinifera]
          Length = 472

 Score =  148 bits (374), Expect = 4e-34
 Identities = 71/120 (59%), Positives = 92/120 (76%), Gaps = 1/120 (0%)
 Frame = +1

Query: 1   VKKHPPFCPNRFTYHILLTQSCSSPDEESLTNVHNVLNLMSNSGFPPNQVSTDVAVRALC 180
           +K  P F P R TYHILL+QSC SP+ + L+ VH  LNLM   GFPP++V+TD+AVR+LC
Sbjct: 121 IKSQPSFSPERSTYHILLSQSCKSPNSD-LSAVHQTLNLMVTHGFPPDRVTTDIAVRSLC 179

Query: 181 GCGREEHAIELVKELCAKNSPPDTYTYNFMVRHLVKNRSIDTVNCFIKDMR-EFGIKPDL 357
             GREEHAIELVKEL  K+SPPD++TYNF++RHL K R++ TV  FI +++  F +KPDL
Sbjct: 180 SAGREEHAIELVKELSLKHSPPDSFTYNFIIRHLCKTRALSTVYNFIDELQNSFQLKPDL 239


>ref|NP_973481.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|330251569|gb|AEC06663.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 349

 Score =  129 bits (323), Expect = 3e-28
 Identities = 63/120 (52%), Positives = 88/120 (73%), Gaps = 1/120 (0%)
 Frame = +1

Query: 1   VKKHPPFCPNRFTYHILLTQSCSSPDEESLTNVHNVLNLMSNSGFPPNQVSTDVAVRALC 180
           +K  P F P R T+ ILL+ +C +PD  S++NVH VLNLM N+G  P+QV+TD+AVR+LC
Sbjct: 112 LKSQPNFRPGRSTFLILLSHACRAPDS-SISNVHRVLNLMVNNGLEPDQVTTDIAVRSLC 170

Query: 181 GCGREEHAIELVKELCAKNSPPDTYTYNFMVRHLVKNRSIDTVNCFIKDMR-EFGIKPDL 357
             GR + A +L+KEL  K+SPPDTYTYNF+++HL K + +  V  F+ +MR +F +KPDL
Sbjct: 171 ETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDL 230


>ref|NP_565422.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75146596|sp|Q84J71.1|PP161_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At2g17670 gi|28393395|gb|AAO42121.1| unknown protein
           [Arabidopsis thaliana] gi|28973597|gb|AAO64123.1|
           unknown protein [Arabidopsis thaliana]
           gi|330251570|gb|AEC06664.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 463

 Score =  129 bits (323), Expect = 3e-28
 Identities = 63/120 (52%), Positives = 88/120 (73%), Gaps = 1/120 (0%)
 Frame = +1

Query: 1   VKKHPPFCPNRFTYHILLTQSCSSPDEESLTNVHNVLNLMSNSGFPPNQVSTDVAVRALC 180
           +K  P F P R T+ ILL+ +C +PD  S++NVH VLNLM N+G  P+QV+TD+AVR+LC
Sbjct: 112 LKSQPNFRPGRSTFLILLSHACRAPDS-SISNVHRVLNLMVNNGLEPDQVTTDIAVRSLC 170

Query: 181 GCGREEHAIELVKELCAKNSPPDTYTYNFMVRHLVKNRSIDTVNCFIKDMR-EFGIKPDL 357
             GR + A +L+KEL  K+SPPDTYTYNF+++HL K + +  V  F+ +MR +F +KPDL
Sbjct: 171 ETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDL 230


>ref|XP_002884075.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297329915|gb|EFH60334.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 462

 Score =  129 bits (323), Expect = 3e-28
 Identities = 63/120 (52%), Positives = 88/120 (73%), Gaps = 1/120 (0%)
 Frame = +1

Query: 1   VKKHPPFCPNRFTYHILLTQSCSSPDEESLTNVHNVLNLMSNSGFPPNQVSTDVAVRALC 180
           +K  P F P R T+ ILL+ +C +PD  S++NVH VLNLM N+G  P+QV+TD+AVR+LC
Sbjct: 111 LKSQPNFRPGRSTFLILLSHACRAPDS-SISNVHRVLNLMVNNGLEPDQVTTDIAVRSLC 169

Query: 181 GCGREEHAIELVKELCAKNSPPDTYTYNFMVRHLVKNRSIDTVNCFIKDMR-EFGIKPDL 357
             GR + A +L+KEL  K+SPPDTYTYNF+++HL K + +  V  F+ +MR +F +KPDL
Sbjct: 170 ETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDL 229


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