BLASTX nr result

ID: Scutellaria24_contig00017302 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00017302
         (528 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI30307.3| unnamed protein product [Vitis vinifera]              142   3e-32
ref|XP_002276489.1| PREDICTED: ABC transporter B family member 2...   142   3e-32
ref|XP_002308470.1| ABC transporter family, retinal flippase sub...   117   1e-24
ref|XP_002530326.1| abc transporter, putative [Ricinus communis]...   115   4e-24
ref|NP_196011.1| ABC transporter B family member 29 [Arabidopsis...   111   7e-23

>emb|CBI30307.3| unnamed protein product [Vitis vinifera]
          Length = 723

 Score =  142 bits (358), Expect = 3e-32
 Identities = 66/110 (60%), Positives = 86/110 (78%)
 Frame = -3

Query: 343 PIKFASLTWLTPYLQSEWRPILCGWLCSTISVYSLSKIVPLAGRLPSQLASVDLASLRNE 164
           P  F SL  + PY+ SE++PIL GW CS +SVYSLSKIVP  G+  + L+ +D   LR+E
Sbjct: 148 PSTFHSLEAIKPYVLSEYKPILKGWFCSLVSVYSLSKIVPKVGKFSATLSKIDAIHLRDE 207

Query: 163 GMVLGVLVLVRIMANYWQQASLWEAALNSVYKIRVYVFSRVLQRDMGFFE 14
           G+VLGVL+L R++A+YWQQA LW+AALNSVYK+RV+ F +VLQRD+ FFE
Sbjct: 208 GLVLGVLLLARLVASYWQQAFLWDAALNSVYKVRVFAFDKVLQRDLEFFE 257


>ref|XP_002276489.1| PREDICTED: ABC transporter B family member 29, chloroplastic [Vitis
           vinifera]
          Length = 630

 Score =  142 bits (358), Expect = 3e-32
 Identities = 66/110 (60%), Positives = 86/110 (78%)
 Frame = -3

Query: 343 PIKFASLTWLTPYLQSEWRPILCGWLCSTISVYSLSKIVPLAGRLPSQLASVDLASLRNE 164
           P  F SL  + PY+ SE++PIL GW CS +SVYSLSKIVP  G+  + L+ +D   LR+E
Sbjct: 54  PSTFHSLEAIKPYVLSEYKPILKGWFCSLVSVYSLSKIVPKVGKFSATLSKIDAIHLRDE 113

Query: 163 GMVLGVLVLVRIMANYWQQASLWEAALNSVYKIRVYVFSRVLQRDMGFFE 14
           G+VLGVL+L R++A+YWQQA LW+AALNSVYK+RV+ F +VLQRD+ FFE
Sbjct: 114 GLVLGVLLLARLVASYWQQAFLWDAALNSVYKVRVFAFDKVLQRDLEFFE 163


>ref|XP_002308470.1| ABC transporter family, retinal flippase subfamily [Populus
           trichocarpa] gi|222854446|gb|EEE91993.1| ABC transporter
           family, retinal flippase subfamily [Populus trichocarpa]
          Length = 570

 Score =  117 bits (293), Expect = 1e-24
 Identities = 54/104 (51%), Positives = 79/104 (75%)
 Frame = -3

Query: 325 LTWLTPYLQSEWRPILCGWLCSTISVYSLSKIVPLAGRLPSQLASVDLASLRNEGMVLGV 146
           L+ + P++ S+++PIL GWLCS +SV SLS++VP  G+  S +  ++  +LRN+G+VL  
Sbjct: 1   LSIIKPFIFSQYKPILLGWLCSLLSVLSLSQLVPKFGQFSSSIGKINGVTLRNDGLVLAG 60

Query: 145 LVLVRIMANYWQQASLWEAALNSVYKIRVYVFSRVLQRDMGFFE 14
           L L +++A Y Q A LWEAALN+ YKIRV+VF RVL+R++GFFE
Sbjct: 61  LFLAKLIATYGQHALLWEAALNASYKIRVFVFERVLERELGFFE 104


>ref|XP_002530326.1| abc transporter, putative [Ricinus communis]
           gi|223530130|gb|EEF32042.1| abc transporter, putative
           [Ricinus communis]
          Length = 650

 Score =  115 bits (288), Expect = 4e-24
 Identities = 66/157 (42%), Positives = 92/157 (58%), Gaps = 10/157 (6%)
 Frame = -3

Query: 442 PTLNRTSSAI----NSCKL-SFSAKTFSNADRCNRPSPPIK-----FASLTWLTPYLQSE 293
           P LN  S  +    N  KL SFS   + N  +  +           F SL+ + PY+ S+
Sbjct: 30  PILNFPSKTLLKPLNCTKLPSFSTCQYPNQSKLQQKQQKSNSISHTFQSLSTIKPYVLSQ 89

Query: 292 WRPILCGWLCSTISVYSLSKIVPLAGRLPSQLASVDLASLRNEGMVLGVLVLVRIMANYW 113
            + IL GWLCS ISV SLS+IVP  G+  + +  +D   LRNEG+VL  L L +++A + 
Sbjct: 90  QKTILLGWLCSVISVLSLSQIVPRIGQFSANIGKIDALRLRNEGVVLAALFLAKLIATFG 149

Query: 112 QQASLWEAALNSVYKIRVYVFSRVLQRDMGFFESEKG 2
           Q + LW+AALN+ Y+IRV+VF RVL+R + FFE   G
Sbjct: 150 QHSLLWKAALNAGYEIRVHVFERVLKRQLAFFEGGSG 186


>ref|NP_196011.1| ABC transporter B family member 29 [Arabidopsis thaliana]
           gi|75335698|sp|Q9LZB8.1|AB29B_ARATH RecName: Full=ABC
           transporter B family member 29, chloroplastic; Short=ABC
           transporter ABCB.29; Short=AtABCB29; AltName: Full=ABC2
           homolog 12; Flags: Precursor gi|7406401|emb|CAB85511.1|
           ABC transporter-like protein [Arabidopsis thaliana]
           gi|16604565|gb|AAL24084.1| putative ABC transporter
           protein [Arabidopsis thaliana]
           gi|20259177|gb|AAM14304.1| putative ABC transporter
           [Arabidopsis thaliana] gi|332003288|gb|AED90671.1| ABC
           transporter B family member 29 [Arabidopsis thaliana]
          Length = 634

 Score =  111 bits (277), Expect = 7e-23
 Identities = 58/111 (52%), Positives = 76/111 (68%), Gaps = 2/111 (1%)
 Frame = -3

Query: 328 SLTWLTPYLQSEWRPILCGWLCSTISVYSLSKIVPLAGRLPSQLAS--VDLASLRNEGMV 155
           +L  + PYLQSE + +L GWLCS +SV SLS+IVP  G   S L +    L  L+ E +V
Sbjct: 61  ALETIKPYLQSESKTVLLGWLCSCVSVVSLSQIVPRLGSFTSNLNANAASLTKLKGECLV 120

Query: 154 LGVLVLVRIMANYWQQASLWEAALNSVYKIRVYVFSRVLQRDMGFFESEKG 2
           L  LVL +++A Y QQA LWEAALN+VYKIRV+ + RVL+R++ FFE   G
Sbjct: 121 LAGLVLAKVVAYYLQQAFLWEAALNTVYKIRVFAYRRVLERELEFFEGGNG 171


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