BLASTX nr result

ID: Scutellaria24_contig00017166 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00017166
         (1188 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003555854.1| PREDICTED: DDB1- and CUL4-associated factor ...   172   1e-40
ref|XP_003555853.1| PREDICTED: DDB1- and CUL4-associated factor ...   172   1e-40
ref|XP_003536728.1| PREDICTED: DDB1- and CUL4-associated factor ...   170   7e-40
gb|ACU19502.1| unknown [Glycine max]                                  170   7e-40
ref|XP_002521240.1| WD-repeat protein, putative [Ricinus communi...   168   3e-39

>ref|XP_003555854.1| PREDICTED: DDB1- and CUL4-associated factor 8-like isoform 2 [Glycine
            max]
          Length = 490

 Score =  172 bits (436), Expect = 1e-40
 Identities = 80/122 (65%), Positives = 95/122 (77%)
 Frame = -3

Query: 1180 SDSSDMTTDDFPGLCPSKFEDSVNAAPQSYKGHKNYETVKGVNFFGPKCDYVVSGSDCGR 1001
            SD+S++          SK +      PQ +KGH+N ETVKGVNFFGPKC+YVVSGSDCGR
Sbjct: 294  SDASEIGFSHGSVSSQSKMDADEKVTPQVFKGHRNCETVKGVNFFGPKCEYVVSGSDCGR 353

Query: 1000 IFIWKKKGGELVRVMEADKYVVNCVVSHPHATVLASSGIEQDIKIWIPKAIDRAILPTNI 821
            IFIWKKK G+L+RVMEADKYVVNC+ SHPH  VLASSGIE DIKIW PKA+++A LP NI
Sbjct: 354  IFIWKKKSGQLIRVMEADKYVVNCIESHPHTMVLASSGIEHDIKIWTPKALEKATLPKNI 413

Query: 820  QK 815
            ++
Sbjct: 414  EQ 415


>ref|XP_003555853.1| PREDICTED: DDB1- and CUL4-associated factor 8-like isoform 1 [Glycine
            max]
          Length = 489

 Score =  172 bits (436), Expect = 1e-40
 Identities = 80/122 (65%), Positives = 95/122 (77%)
 Frame = -3

Query: 1180 SDSSDMTTDDFPGLCPSKFEDSVNAAPQSYKGHKNYETVKGVNFFGPKCDYVVSGSDCGR 1001
            SD+S++          SK +      PQ +KGH+N ETVKGVNFFGPKC+YVVSGSDCGR
Sbjct: 294  SDASEIGFSHGSVSSQSKMDADEKVTPQVFKGHRNCETVKGVNFFGPKCEYVVSGSDCGR 353

Query: 1000 IFIWKKKGGELVRVMEADKYVVNCVVSHPHATVLASSGIEQDIKIWIPKAIDRAILPTNI 821
            IFIWKKK G+L+RVMEADKYVVNC+ SHPH  VLASSGIE DIKIW PKA+++A LP NI
Sbjct: 354  IFIWKKKSGQLIRVMEADKYVVNCIESHPHTMVLASSGIEHDIKIWTPKALEKATLPKNI 413

Query: 820  QK 815
            ++
Sbjct: 414  EQ 415


>ref|XP_003536728.1| PREDICTED: DDB1- and CUL4-associated factor 8-like [Glycine max]
          Length = 497

 Score =  170 bits (430), Expect = 7e-40
 Identities = 79/122 (64%), Positives = 95/122 (77%)
 Frame = -3

Query: 1180 SDSSDMTTDDFPGLCPSKFEDSVNAAPQSYKGHKNYETVKGVNFFGPKCDYVVSGSDCGR 1001
            SD+S++          S  +      PQ +KGH+N ETVKGVNFFGPKC+YVVSGSDCGR
Sbjct: 302  SDASEIGFSHGSVSSQSNMDADDKITPQVFKGHRNCETVKGVNFFGPKCEYVVSGSDCGR 361

Query: 1000 IFIWKKKGGELVRVMEADKYVVNCVVSHPHATVLASSGIEQDIKIWIPKAIDRAILPTNI 821
            IFIWKKKGG+L+RVMEADK+VVNC+ SHPH  VLASSGIE DIKIW PKA+++A LP NI
Sbjct: 362  IFIWKKKGGQLIRVMEADKHVVNCIESHPHTMVLASSGIENDIKIWTPKALEKATLPKNI 421

Query: 820  QK 815
            ++
Sbjct: 422  EQ 423


>gb|ACU19502.1| unknown [Glycine max]
          Length = 489

 Score =  170 bits (430), Expect = 7e-40
 Identities = 79/122 (64%), Positives = 94/122 (77%)
 Frame = -3

Query: 1180 SDSSDMTTDDFPGLCPSKFEDSVNAAPQSYKGHKNYETVKGVNFFGPKCDYVVSGSDCGR 1001
            SD+S++          SK +      PQ +KGH+N ETVKGVNFFGPKC+YVVSGSDCGR
Sbjct: 294  SDASEIGFSHGSVSSQSKMDADEKVTPQVFKGHRNCETVKGVNFFGPKCEYVVSGSDCGR 353

Query: 1000 IFIWKKKGGELVRVMEADKYVVNCVVSHPHATVLASSGIEQDIKIWIPKAIDRAILPTNI 821
            IFIWKKK G+L+RVMEADKYVVNC+  HPH  VLASSGIE DIKIW PKA+++A LP NI
Sbjct: 354  IFIWKKKSGQLIRVMEADKYVVNCIEFHPHTMVLASSGIEHDIKIWTPKALEKATLPKNI 413

Query: 820  QK 815
            ++
Sbjct: 414  EQ 415


>ref|XP_002521240.1| WD-repeat protein, putative [Ricinus communis]
            gi|223539508|gb|EEF41096.1| WD-repeat protein, putative
            [Ricinus communis]
          Length = 482

 Score =  168 bits (425), Expect = 3e-39
 Identities = 76/95 (80%), Positives = 86/95 (90%)
 Frame = -3

Query: 1105 APQSYKGHKNYETVKGVNFFGPKCDYVVSGSDCGRIFIWKKKGGELVRVMEADKYVVNCV 926
            +PQ Y+GH+N ETVKGV+FFGP C+YVVSGSDCGRIFIWKKKGGEL+R MEADK+VVNC+
Sbjct: 314  SPQVYEGHQNCETVKGVSFFGPGCEYVVSGSDCGRIFIWKKKGGELIRAMEADKHVVNCI 373

Query: 925  VSHPHATVLASSGIEQDIKIWIPKAIDRAILPTNI 821
              HPHATVLASSGIE DIK+W PKAI+RA LPTNI
Sbjct: 374  EPHPHATVLASSGIENDIKMWTPKAIERATLPTNI 408


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