BLASTX nr result

ID: Scutellaria24_contig00017093 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00017093
         (500 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK38101.1| unknown [Lotus japonicus] gi|388508218|gb|AFK4217...   178   5e-43
ref|XP_003553735.1| PREDICTED: heterogeneous nuclear ribonucleop...   175   3e-42
ref|XP_003525676.1| PREDICTED: nuclear pore membrane glycoprotei...   175   3e-42
ref|XP_003547716.1| PREDICTED: RNA-binding protein Musashi homol...   175   4e-42
ref|NP_001242362.1| uncharacterized protein LOC100793209 [Glycin...   174   5e-42

>gb|AFK38101.1| unknown [Lotus japonicus] gi|388508218|gb|AFK42175.1| unknown
           [Lotus japonicus]
          Length = 373

 Score =  178 bits (451), Expect = 5e-43
 Identities = 87/135 (64%), Positives = 106/135 (78%)
 Frame = +3

Query: 3   KVIEETHIFHGKQVEIKRTIPREGGGSKNFKTKKIFVGGIPTTIGEDEFRDFFSNFGEVK 182
           KVIE+THI +GKQVEIKRTIPR   GSK+FKTKKIFVGGIP+ + EDEFRDFF+ +GEVK
Sbjct: 101 KVIEDTHIINGKQVEIKRTIPRGAVGSKDFKTKKIFVGGIPSNVTEDEFRDFFTRYGEVK 160

Query: 183 EQQIMRDHSSGRSRGFGFITFESDRSVDDLLANGNKLDFAGTQVEIXXXXXXXXXXXXXX 362
           + QIMRDHS+ RSRGFGFITF+S+ +VDDLL+ GNK+DFAGTQVEI              
Sbjct: 161 DNQIMRDHSTNRSRGFGFITFDSEDAVDDLLSMGNKIDFAGTQVEIKKAEPKKPNPPTPS 220

Query: 363 SRRQSNSRVAYGGGH 407
           S+R ++SR +Y  G+
Sbjct: 221 SKRYNDSRSSYSSGY 235


>ref|XP_003553735.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A2 homolog
           2-like [Glycine max]
          Length = 374

 Score =  175 bits (444), Expect = 3e-42
 Identities = 86/138 (62%), Positives = 108/138 (78%), Gaps = 2/138 (1%)
 Frame = +3

Query: 6   VIEETHIFHGKQVEIKRTIPR--EGGGSKNFKTKKIFVGGIPTTIGEDEFRDFFSNFGEV 179
           VIE+THI +GKQVEIKRTIPR   G  SK+F+TKKIFVGGIP+T+ EDEFRDFF+ +GEV
Sbjct: 101 VIEDTHIINGKQVEIKRTIPRGAAGSNSKDFRTKKIFVGGIPSTVTEDEFRDFFTRYGEV 160

Query: 180 KEQQIMRDHSSGRSRGFGFITFESDRSVDDLLANGNKLDFAGTQVEIXXXXXXXXXXXXX 359
           K+ QIMRDHS+ RSRGFGFIT++S+ +VDDLL+ GNK++FAG QVEI             
Sbjct: 161 KDHQIMRDHSTNRSRGFGFITYDSEEAVDDLLSVGNKIEFAGAQVEIKKAEPKKPNPPAP 220

Query: 360 XSRRQSNSRVAYGGGHRD 413
            S+R ++SR +YGGG+ D
Sbjct: 221 SSKRYNDSRSSYGGGYGD 238


>ref|XP_003525676.1| PREDICTED: nuclear pore membrane glycoprotein 210-like [Glycine max]
          Length = 2304

 Score =  175 bits (444), Expect = 3e-42
 Identities = 87/139 (62%), Positives = 108/139 (77%), Gaps = 1/139 (0%)
 Frame = +3

Query: 3    KVIEETHIFHGKQVEIKRTIPREGGGSKNFKTKKIFVGGIPTTIGEDEFRDFFSNFGEVK 182
            KVIE+ HI +GKQVEIKRTIPR   GSK+F+TKKIFVGGIP+ + EDEFRDFF+ +GEVK
Sbjct: 2032 KVIEDPHIINGKQVEIKRTIPRGAVGSKDFRTKKIFVGGIPSNVTEDEFRDFFTRYGEVK 2091

Query: 183  EQQIMRDHSSGRSRGFGFITFESDRSVDDLLANGNKLDFAGTQVEIXXXXXXXXXXXXXX 362
            + QIMRDHS+ RSRGFGFITF+S+ +VDDLL+ GNK+DFAG+QVEI              
Sbjct: 2092 DHQIMRDHSTNRSRGFGFITFDSEEAVDDLLSMGNKIDFAGSQVEIKKAEPKKPSSAPPS 2151

Query: 363  SRRQSNSRVAY-GGGHRDT 416
            S+R ++SR +Y  GG+ DT
Sbjct: 2152 SKRHNDSRSSYSSGGYGDT 2170



 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 31/85 (36%), Positives = 48/85 (56%)
 Frame = +3

Query: 66   REGGGSKNFKTKKIFVGGIPTTIGEDEFRDFFSNFGEVKEQQIMRDHSSGRSRGFGFITF 245
            REG    N +  KIF+GG+       +F   F  +GE+ +  IM+D  +G+ RGFGFIT+
Sbjct: 1965 REGRRRINPQNTKIFIGGLARETTIAQFIKHFGKYGEITDSVIMKDRKTGQPRGFGFITY 2024

Query: 246  ESDRSVDDLLANGNKLDFAGTQVEI 320
                 VD ++ + + ++  G QVEI
Sbjct: 2025 ADPSVVDKVIEDPHIIN--GKQVEI 2047


>ref|XP_003547716.1| PREDICTED: RNA-binding protein Musashi homolog Rbp6-like [Glycine
           max]
          Length = 372

 Score =  175 bits (443), Expect = 4e-42
 Identities = 86/138 (62%), Positives = 108/138 (78%), Gaps = 2/138 (1%)
 Frame = +3

Query: 6   VIEETHIFHGKQVEIKRTIPRE--GGGSKNFKTKKIFVGGIPTTIGEDEFRDFFSNFGEV 179
           VIE+THI +GKQVEIKRTIPR   G  SK+F+TKKIFVGGIP+T+ EDEFRDFF+ +GEV
Sbjct: 99  VIEDTHIINGKQVEIKRTIPRGAVGSNSKDFRTKKIFVGGIPSTVTEDEFRDFFTRYGEV 158

Query: 180 KEQQIMRDHSSGRSRGFGFITFESDRSVDDLLANGNKLDFAGTQVEIXXXXXXXXXXXXX 359
           K+ QIMRDHS+ RSRGFGFIT++S+ +VDDLL+ GNK++FAG QVEI             
Sbjct: 159 KDHQIMRDHSTNRSRGFGFITYDSEEAVDDLLSVGNKIEFAGAQVEIKKAEPKKPNPPAP 218

Query: 360 XSRRQSNSRVAYGGGHRD 413
            S+R ++SR +YGGG+ D
Sbjct: 219 SSKRYNDSRSSYGGGYGD 236


>ref|NP_001242362.1| uncharacterized protein LOC100793209 [Glycine max]
           gi|255636483|gb|ACU18580.1| unknown [Glycine max]
          Length = 377

 Score =  174 bits (442), Expect = 5e-42
 Identities = 85/134 (63%), Positives = 103/134 (76%)
 Frame = +3

Query: 3   KVIEETHIFHGKQVEIKRTIPREGGGSKNFKTKKIFVGGIPTTIGEDEFRDFFSNFGEVK 182
           KVIEE H+ +GKQVEIKRTIPR   GSK+F+TKKIFVGGIP+ + EDEFRDFF+ +GEVK
Sbjct: 98  KVIEEPHVINGKQVEIKRTIPRGAVGSKDFRTKKIFVGGIPSNVTEDEFRDFFTRYGEVK 157

Query: 183 EQQIMRDHSSGRSRGFGFITFESDRSVDDLLANGNKLDFAGTQVEIXXXXXXXXXXXXXX 362
           + QIMRDHS+ RSRGFGFITFES+ +VDDLL+ GNK+DFAG QVEI              
Sbjct: 158 DHQIMRDHSTNRSRGFGFITFESEEAVDDLLSMGNKIDFAGAQVEIKKAEPKKPNSAPPS 217

Query: 363 SRRQSNSRVAYGGG 404
           S+R ++SR +Y  G
Sbjct: 218 SKRYNDSRSSYSSG 231


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