BLASTX nr result

ID: Scutellaria24_contig00017063 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00017063
         (1545 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002524794.1| DNA binding protein, putative [Ricinus commu...   169   2e-39
ref|NP_001055505.2| Os05g0404600 [Oryza sativa Japonica Group] g...   168   3e-39
gb|EEE63680.1| hypothetical protein OsJ_18498 [Oryza sativa Japo...   168   3e-39
gb|EAY98004.1| hypothetical protein OsI_19918 [Oryza sativa Indi...   168   3e-39
ref|XP_002320386.1| methyl binding domain protein [Populus trich...   166   2e-38

>ref|XP_002524794.1| DNA binding protein, putative [Ricinus communis]
           gi|223535978|gb|EEF37637.1| DNA binding protein,
           putative [Ricinus communis]
          Length = 160

 Score =  169 bits (428), Expect = 2e-39
 Identities = 78/141 (55%), Positives = 104/141 (73%)
 Frame = -2

Query: 644 VHLWSAQCGECFKWRLIPSEEEFEEIRSKFIDEPFVCSKIPHISCRDHAEIEYDDSRTWM 465
           V  ++AQC +C KWR+I +EEE+EEIRSK ++ PF C++ P ISC D A+IE D SRTW+
Sbjct: 4   VDTYAAQCEKCMKWRVIETEEEYEEIRSKIVENPFYCNRKPGISCEDPADIECDASRTWV 63

Query: 464 IHKPNIPKTPAGFKRQVVIRKSLSRTDCYYNTPNGKRLRSSIEVDKFLDKYPDYRKKVSI 285
           I KP +PKTP GFKR +V+R+  S+ D YY TP GK+LR+  E+  FL+  P Y K VSI
Sbjct: 64  IDKPGLPKTPGGFKRSLVLRRDFSKMDAYYITPTGKKLRTRNEIAAFLEANPKY-KGVSI 122

Query: 284 KDFSFAGPKVMEDTLPHNVAK 222
           +DF+F  PKVME+T+P +V K
Sbjct: 123 EDFNFTSPKVMEETVPEDVKK 143


>ref|NP_001055505.2| Os05g0404600 [Oryza sativa Japonica Group]
           gi|255676354|dbj|BAF17419.2| Os05g0404600, partial
           [Oryza sativa Japonica Group]
          Length = 168

 Score =  168 bits (426), Expect = 3e-39
 Identities = 73/144 (50%), Positives = 104/144 (72%)
 Frame = -2

Query: 662 GNSSKLVHLWSAQCGECFKWRLIPSEEEFEEIRSKFIDEPFVCSKIPHISCRDHAEIEYD 483
           G+S+  + +++ QC EC KWR +P+++EFE IR  F +EP+ CS+ P  SC D A+IEYD
Sbjct: 4   GSSTDSIGMYAVQCCECHKWRKVPTKDEFETIRENFTEEPWHCSRRPDCSCEDPADIEYD 63

Query: 482 DSRTWMIHKPNIPKTPAGFKRQVVIRKSLSRTDCYYNTPNGKRLRSSIEVDKFLDKYPDY 303
            SR W++ KPNIPK PAG +R V++R  LS+ D YY  PNGKR+R + EVDKFL+  P Y
Sbjct: 64  SSRIWVLDKPNIPKPPAGTERLVIMRGDLSKMDTYYVMPNGKRVRCTAEVDKFLEANPQY 123

Query: 302 RKKVSIKDFSFAGPKVMEDTLPHN 231
           + + S++ FSF  PK++E+T+ HN
Sbjct: 124 KDRFSVESFSFTTPKIVEETVSHN 147


>gb|EEE63680.1| hypothetical protein OsJ_18498 [Oryza sativa Japonica Group]
          Length = 267

 Score =  168 bits (426), Expect = 3e-39
 Identities = 73/144 (50%), Positives = 104/144 (72%)
 Frame = -2

Query: 662 GNSSKLVHLWSAQCGECFKWRLIPSEEEFEEIRSKFIDEPFVCSKIPHISCRDHAEIEYD 483
           G+S+  + +++ QC EC KWR +P+++EFE IR  F +EP+ CS+ P  SC D A+IEYD
Sbjct: 103 GSSTDSIGMYAVQCCECHKWRKVPTKDEFETIRENFTEEPWHCSRRPDCSCEDPADIEYD 162

Query: 482 DSRTWMIHKPNIPKTPAGFKRQVVIRKSLSRTDCYYNTPNGKRLRSSIEVDKFLDKYPDY 303
            SR W++ KPNIPK PAG +R V++R  LS+ D YY  PNGKR+R + EVDKFL+  P Y
Sbjct: 163 SSRIWVLDKPNIPKPPAGTERLVIMRGDLSKMDTYYVMPNGKRVRCTAEVDKFLEANPQY 222

Query: 302 RKKVSIKDFSFAGPKVMEDTLPHN 231
           + + S++ FSF  PK++E+T+ HN
Sbjct: 223 KDRFSVESFSFTTPKIVEETVSHN 246


>gb|EAY98004.1| hypothetical protein OsI_19918 [Oryza sativa Indica Group]
          Length = 271

 Score =  168 bits (426), Expect = 3e-39
 Identities = 73/144 (50%), Positives = 104/144 (72%)
 Frame = -2

Query: 662 GNSSKLVHLWSAQCGECFKWRLIPSEEEFEEIRSKFIDEPFVCSKIPHISCRDHAEIEYD 483
           G+S+  + +++ QC EC KWR +P+++EFE IR  F +EP+ CS+ P  SC D A+IEYD
Sbjct: 107 GSSTDSIGMYAVQCCECHKWRKVPTKDEFETIRENFTEEPWHCSRRPDCSCEDPADIEYD 166

Query: 482 DSRTWMIHKPNIPKTPAGFKRQVVIRKSLSRTDCYYNTPNGKRLRSSIEVDKFLDKYPDY 303
            SR W++ KPNIPK PAG +R V++R  LS+ D YY  PNGKR+R + EVDKFL+  P Y
Sbjct: 167 SSRIWVLDKPNIPKPPAGTERLVIMRGDLSKMDTYYVMPNGKRVRCTAEVDKFLEANPQY 226

Query: 302 RKKVSIKDFSFAGPKVMEDTLPHN 231
           + + S++ FSF  PK++E+T+ HN
Sbjct: 227 KDRFSVESFSFTTPKIVEETVSHN 250


>ref|XP_002320386.1| methyl binding domain protein [Populus trichocarpa]
           gi|118485542|gb|ABK94623.1| unknown [Populus
           trichocarpa] gi|222861159|gb|EEE98701.1| methyl binding
           domain protein [Populus trichocarpa]
          Length = 182

 Score =  166 bits (419), Expect = 2e-38
 Identities = 73/141 (51%), Positives = 103/141 (73%)
 Frame = -2

Query: 644 VHLWSAQCGECFKWRLIPSEEEFEEIRSKFIDEPFVCSKIPHISCRDHAEIEYDDSRTWM 465
           +  ++AQC +C KWR+I +EEE+EEIRSK  + PFVC++ P +SC D A+IEY+ +RTW+
Sbjct: 25  IDTYAAQCDKCLKWRVIATEEEYEEIRSKMEESPFVCNRKPGVSCDDPADIEYNATRTWV 84

Query: 464 IHKPNIPKTPAGFKRQVVIRKSLSRTDCYYNTPNGKRLRSSIEVDKFLDKYPDYRKKVSI 285
           I +P IPKTP GFKR +V+R+  S+ D YY TP GK+LR+  E+  F+D  P Y K V++
Sbjct: 85  IDRPGIPKTPEGFKRSLVLRRDFSKMDAYYITPTGKKLRTRNEIAAFIDANPKY-KDVNL 143

Query: 284 KDFSFAGPKVMEDTLPHNVAK 222
            DF+F  PKVMEDT+P +  +
Sbjct: 144 SDFNFTSPKVMEDTIPEDAVR 164


Top