BLASTX nr result

ID: Scutellaria24_contig00017030 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00017030
         (379 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAG52341.1|AC011663_20 hypothetical protein; 86186-84430 [Ara...    72   6e-11
ref|NP_564992.1| F-box protein [Arabidopsis thaliana] gi|7516518...    72   6e-11
ref|XP_002527920.1| conserved hypothetical protein [Ricinus comm...    66   3e-09
ref|XP_002887314.1| F-box family protein [Arabidopsis lyrata sub...    65   8e-09
ref|XP_003519795.1| PREDICTED: F-box protein At1g70590-like [Gly...    63   2e-08

>gb|AAG52341.1|AC011663_20 hypothetical protein; 86186-84430 [Arabidopsis thaliana]
           gi|12325035|gb|AAG52462.1|AC010796_1 hypothetical
           protein; 68316-70072 [Arabidopsis thaliana]
          Length = 364

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 38/97 (39%), Positives = 55/97 (56%), Gaps = 6/97 (6%)
 Frame = +1

Query: 106 MKHKTWPCSSDSNHFTALPFFK------KSHDSSILTKPAKTPLSLFNFAPKVQAXXXXX 267
           MK +TWPC S+ + F++L F K      +S  SSI    AK+  S  + +    +     
Sbjct: 1   MKQRTWPCRSEGSRFSSLSFLKPHDKDKRSRISSINKATAKSTTSSRSSSSSSSSRPPSN 60

Query: 268 XXXXXXALPYDVIARIAASFTLPNLKAASLVCRAWRD 378
                  LPYD++ +IAA F+ PNL+AASLVC++WRD
Sbjct: 61  EFGDFSMLPYDILMKIAAPFSHPNLQAASLVCKSWRD 97


>ref|NP_564992.1| F-box protein [Arabidopsis thaliana]
           gi|75165183|sp|Q94C27.1|FB84_ARATH RecName: Full=F-box
           protein At1g70590 gi|14335050|gb|AAK59789.1|
           At1g70590/F5A18_23 [Arabidopsis thaliana]
           gi|27363348|gb|AAO11593.1| At1g70590/F5A18_23
           [Arabidopsis thaliana] gi|332196965|gb|AEE35086.1| F-box
           protein [Arabidopsis thaliana]
          Length = 351

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 38/97 (39%), Positives = 55/97 (56%), Gaps = 6/97 (6%)
 Frame = +1

Query: 106 MKHKTWPCSSDSNHFTALPFFK------KSHDSSILTKPAKTPLSLFNFAPKVQAXXXXX 267
           MK +TWPC S+ + F++L F K      +S  SSI    AK+  S  + +    +     
Sbjct: 1   MKQRTWPCRSEGSRFSSLSFLKPHDKDKRSRISSINKATAKSTTSSRSSSSSSSSRPPSN 60

Query: 268 XXXXXXALPYDVIARIAASFTLPNLKAASLVCRAWRD 378
                  LPYD++ +IAA F+ PNL+AASLVC++WRD
Sbjct: 61  EFGDFSMLPYDILMKIAAPFSHPNLQAASLVCKSWRD 97


>ref|XP_002527920.1| conserved hypothetical protein [Ricinus communis]
           gi|223532695|gb|EEF34477.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 329

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 38/91 (41%), Positives = 51/91 (56%)
 Frame = +1

Query: 106 MKHKTWPCSSDSNHFTALPFFKKSHDSSILTKPAKTPLSLFNFAPKVQAXXXXXXXXXXX 285
           MK +TWP  SD + F +LP         I+  P+K+ +S     PK              
Sbjct: 1   MKQRTWPSRSDGSKFKSLPLPYTISKREII--PSKSVISFS--VPK--------DGRDFS 48

Query: 286 ALPYDVIARIAASFTLPNLKAASLVCRAWRD 378
            LP+D++ +IAASFTLPNL+ ASLVCR+WRD
Sbjct: 49  TLPFDILIKIAASFTLPNLQTASLVCRSWRD 79


>ref|XP_002887314.1| F-box family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297333155|gb|EFH63573.1| F-box family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 345

 Score = 64.7 bits (156), Expect = 8e-09
 Identities = 36/97 (37%), Positives = 54/97 (55%), Gaps = 6/97 (6%)
 Frame = +1

Query: 106 MKHKTWPCSSDSNHFTALPFFK------KSHDSSILTKPAKTPLSLFNFAPKVQAXXXXX 267
           MK +TWPC S+ + FT+L F K      ++  SSI    AK+  S  + +    +     
Sbjct: 1   MKQRTWPCRSEGSRFTSLSFLKPQEKEKRTRFSSINRATAKSSTS--SRSSSSSSPLSNE 58

Query: 268 XXXXXXALPYDVIARIAASFTLPNLKAASLVCRAWRD 378
                  LP+D++ +IAA F+ PNL+AAS VC++WRD
Sbjct: 59  IGGDFSMLPFDILMKIAAPFSHPNLQAASSVCKSWRD 95


>ref|XP_003519795.1| PREDICTED: F-box protein At1g70590-like [Glycine max]
          Length = 327

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 40/92 (43%), Positives = 52/92 (56%), Gaps = 3/92 (3%)
 Frame = +1

Query: 106 MKHKTWPCSSDSNHFTALPFFKKSHDSSI---LTKPAKTPLSLFNFAPKVQAXXXXXXXX 276
           MKH TWP +S S+ F++LPF  +S   +       P  +P    +F+             
Sbjct: 1   MKHPTWPRTS-SSPFSSLPFSNRSEFFTTRLCARPPLPSPPGAGDFS------------- 46

Query: 277 XXXALPYDVIARIAASFTLPNLKAASLVCRAW 372
              ALPYDV+A+IAASF  PNL+AASLVCRAW
Sbjct: 47  ---ALPYDVLAKIAASFDDPNLRAASLVCRAW 75


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