BLASTX nr result

ID: Scutellaria24_contig00016995 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00016995
         (501 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001234047.1| COP1 homolog [Solanum lycopersicum] gi|40909...    83   3e-14
gb|AEA86331.1| E3 ubiquitin-protein ligase COP1 [Solanum nigrum]       83   3e-14
gb|AAN86553.1| COP1 [Brassica rapa subsp. pekinensis]                  81   8e-14
gb|AAG31173.1| COP1 [Ipomoea nil]                                      81   8e-14
ref|XP_002331573.1| predicted protein [Populus trichocarpa] gi|2...    81   8e-14

>ref|NP_001234047.1| COP1 homolog [Solanum lycopersicum] gi|4090943|gb|AAC98912.1| COP1
           homolog [Solanum lycopersicum]
          Length = 677

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 33/43 (76%), Positives = 36/43 (83%)
 Frame = +1

Query: 64  TACGHSFCYTCIVTHLRHTSDCPCCSHFLDAHHIYPNFLLDKL 192
           TACGHSFCY CIVTHL + SDCPCCSH+L    +YPNFLLDKL
Sbjct: 64  TACGHSFCYMCIVTHLHNKSDCPCCSHYLTTSQLYPNFLLDKL 106


>gb|AEA86331.1| E3 ubiquitin-protein ligase COP1 [Solanum nigrum]
          Length = 173

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 33/43 (76%), Positives = 36/43 (83%)
 Frame = +1

Query: 64  TACGHSFCYTCIVTHLRHTSDCPCCSHFLDAHHIYPNFLLDKL 192
           TACGHSFCY CIVTHL + SDCPCCSH+L    +YPNFLLDKL
Sbjct: 26  TACGHSFCYMCIVTHLHNKSDCPCCSHYLTTSQLYPNFLLDKL 68


>gb|AAN86553.1| COP1 [Brassica rapa subsp. pekinensis]
          Length = 254

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 32/43 (74%), Positives = 36/43 (83%)
 Frame = +1

Query: 64  TACGHSFCYTCIVTHLRHTSDCPCCSHFLDAHHIYPNFLLDKL 192
           T+CGHSFCY CIVTHL + SDCPCCSH+L    +YPNFLLDKL
Sbjct: 14  TSCGHSFCYMCIVTHLHNKSDCPCCSHYLTTAQLYPNFLLDKL 56


>gb|AAG31173.1| COP1 [Ipomoea nil]
          Length = 677

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 32/43 (74%), Positives = 36/43 (83%)
 Frame = +1

Query: 64  TACGHSFCYTCIVTHLRHTSDCPCCSHFLDAHHIYPNFLLDKL 192
           T+CGHSFCY CIVTHL + SDCPCCSH+L    +YPNFLLDKL
Sbjct: 66  TSCGHSFCYMCIVTHLHNKSDCPCCSHYLTTAQLYPNFLLDKL 108


>ref|XP_002331573.1| predicted protein [Populus trichocarpa] gi|222873797|gb|EEF10928.1|
           predicted protein [Populus trichocarpa]
          Length = 602

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 31/43 (72%), Positives = 38/43 (88%)
 Frame = +1

Query: 64  TACGHSFCYTCIVTHLRHTSDCPCCSHFLDAHHIYPNFLLDKL 192
           T+CGHSFCY CI THLR+ +DCPCCSH+L  +HI+PNFLL+KL
Sbjct: 49  TSCGHSFCYLCITTHLRNKNDCPCCSHYLTNNHIFPNFLLNKL 91


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