BLASTX nr result

ID: Scutellaria24_contig00016944 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00016944
         (1487 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN79021.1| hypothetical protein VITISV_009443 [Vitis vinifera]   328   2e-87
ref|XP_002281078.1| PREDICTED: ribonuclease H2 subunit B [Vitis ...   327   6e-87
ref|XP_004138774.1| PREDICTED: ribonuclease H2 subunit B-like [C...   291   3e-76
ref|XP_002517803.1| conserved hypothetical protein [Ricinus comm...   289   1e-75
ref|XP_003522673.1| PREDICTED: ribonuclease H2 subunit B-like [G...   285   3e-74

>emb|CAN79021.1| hypothetical protein VITISV_009443 [Vitis vinifera]
          Length = 277

 Score =  328 bits (841), Expect = 2e-87
 Identities = 162/271 (59%), Positives = 202/271 (74%), Gaps = 9/271 (3%)
 Frame = -1

Query: 1244 MAWWEGVDNTRVLIAQDPSSSGKH-GTMLSLRNPRTGTSTCYLYTDGVLQELHWFKQTHG 1068
            MAW EGV+ TR+LIA D ++ G   G  LSLR+P++G +TCYL+ +G LQEL+WFKQ++G
Sbjct: 1    MAWSEGVEETRLLIAPDVNAIGNGLGQFLSLRHPKSGKATCYLFKNGTLQELNWFKQSYG 60

Query: 1067 SWFLGDYVCEDGRLYTATPVDPVFILLPIFEEARMKKDHEPGKFRQLDEIIYIHGYPGYQ 888
            SWFLGDYVCEDGRLYTAT VDPVFI+LPIFEEARMKK  +PGKFRQLDEI++++ YPGYQ
Sbjct: 61   SWFLGDYVCEDGRLYTATIVDPVFIMLPIFEEARMKKRDDPGKFRQLDEIMFVNSYPGYQ 120

Query: 887  SLSSTAEKTMQIVCDLKEVGSTKFFRLNDLKVLKWLCYKVHRLKQTLPTLDKNYAARDEK 708
             L   AE  MQ+VC++KE+GS+KFFRL+D KVL WLCYKVH+LKQ LPTLDKNYAARD+K
Sbjct: 121  HLIPIAENCMQVVCEIKEIGSSKFFRLDDSKVLAWLCYKVHQLKQILPTLDKNYAARDKK 180

Query: 707  DTLFEAVSIVREYVKDEPWVNLLCSKLKLNL--------EVEIVPPSIESGAASFNPVQE 552
            DTL +A+SI+ EY++DEPW+ LLC  LKLNL         +E  P + ++   S N +Q 
Sbjct: 181  DTLTDAISILGEYLEDEPWLKLLCDHLKLNLLDATMKAXVIEFHPTAPDNSLGSSNQLQG 240

Query: 551  NNXXXXXXXXXXXXXXXXXVDKDSHNIKDMF 459
             +                 V+KDS NIKDMF
Sbjct: 241  KSGNERKTTRPGKQPKKAKVEKDSRNIKDMF 271


>ref|XP_002281078.1| PREDICTED: ribonuclease H2 subunit B [Vitis vinifera]
            gi|296081827|emb|CBI20832.3| unnamed protein product
            [Vitis vinifera]
          Length = 277

 Score =  327 bits (837), Expect = 6e-87
 Identities = 161/271 (59%), Positives = 201/271 (74%), Gaps = 9/271 (3%)
 Frame = -1

Query: 1244 MAWWEGVDNTRVLIAQDPSSSGKH-GTMLSLRNPRTGTSTCYLYTDGVLQELHWFKQTHG 1068
            MAW EGV+ TR+LIA D ++ G   G  LS R+P++G +TCYL+ +G LQEL+WFKQ++G
Sbjct: 1    MAWSEGVEETRLLIAPDVNAIGNGLGQFLSFRHPKSGKATCYLFKNGTLQELNWFKQSYG 60

Query: 1067 SWFLGDYVCEDGRLYTATPVDPVFILLPIFEEARMKKDHEPGKFRQLDEIIYIHGYPGYQ 888
            SWFLGDYVCEDGRLYTAT VDPVFI+LPIFEEARMKK  +PGKFRQLDEI++++ YPGYQ
Sbjct: 61   SWFLGDYVCEDGRLYTATIVDPVFIMLPIFEEARMKKRDDPGKFRQLDEIMFVNSYPGYQ 120

Query: 887  SLSSTAEKTMQIVCDLKEVGSTKFFRLNDLKVLKWLCYKVHRLKQTLPTLDKNYAARDEK 708
             L   AE  MQ+VC++KE+GS+KFFRL+D KVL WLCYKVH+LKQ LPTLDKNYAARD+K
Sbjct: 121  HLIPIAENCMQVVCEIKEIGSSKFFRLDDSKVLAWLCYKVHQLKQILPTLDKNYAARDKK 180

Query: 707  DTLFEAVSIVREYVKDEPWVNLLCSKLKLNL--------EVEIVPPSIESGAASFNPVQE 552
            DTL +A+SI+ EY++DEPW+ LLC  LKLNL         +E  P + ++   S N +Q 
Sbjct: 181  DTLTDAISILGEYLEDEPWLKLLCDHLKLNLLDATMKASVIEFHPTAPDNSLGSSNQLQG 240

Query: 551  NNXXXXXXXXXXXXXXXXXVDKDSHNIKDMF 459
             +                 V+KDS NIKDMF
Sbjct: 241  KSGNERKTTRPGKQPKKAKVEKDSRNIKDMF 271


>ref|XP_004138774.1| PREDICTED: ribonuclease H2 subunit B-like [Cucumis sativus]
            gi|449499524|ref|XP_004160839.1| PREDICTED: ribonuclease
            H2 subunit B-like [Cucumis sativus]
          Length = 281

 Score =  291 bits (745), Expect = 3e-76
 Identities = 151/273 (55%), Positives = 192/273 (70%), Gaps = 11/273 (4%)
 Frame = -1

Query: 1244 MAWWEGVDNTRVLIAQDPS-SSGKHGTMLSLRNPRTGTSTCYLYTDGVLQELHWFKQTHG 1068
            MAW EGV+ TR+LIA D        G  LSLR+P++G  TC+LY + +L+E+HWFKQ++ 
Sbjct: 1    MAWCEGVEETRILIAPDHGVKENVTGCFLSLRHPKSGNPTCFLYVNEMLEEIHWFKQSYS 60

Query: 1067 SWFLGDYVCEDGRLYTATPVDPVFILLPIFEEARMKKDHEPGKFRQLDEIIYIHGYPGYQ 888
            SWFLGDYV EDGRLY+ATPVDPVFI LPIFEEARMKK  + GKFRQLD+I++I+GYPGY 
Sbjct: 61   SWFLGDYVAEDGRLYSATPVDPVFIFLPIFEEARMKKGDDLGKFRQLDDIMFINGYPGYL 120

Query: 887  SLSSTAEKTMQIVCDLKEVGSTKFFRLNDLKVLKWLCYKVHRLKQTLPTLDKNYAARDEK 708
             L   AEK MQ+VC++KEVGS++FFRL+D KVL WL +KV +LK+TL TLDKNYAAR+EK
Sbjct: 121  HLLPLAEKFMQVVCEVKEVGSSRFFRLDDSKVLAWLYHKVCQLKRTLCTLDKNYAAREEK 180

Query: 707  DTLFEAVSIVREYVKDEPWVNLLCSKLKLNL--------EVEIVPPSIESGAASFNPVQ- 555
            +TL +AVSI+ EY+KD+PW+ LLC  LKLN         + E  P SIE+   S +  + 
Sbjct: 181  ETLCDAVSILGEYLKDQPWLKLLCDHLKLNFAEATRKASDSERAPTSIENNFDSISQDKS 240

Query: 554  -ENNXXXXXXXXXXXXXXXXXVDKDSHNIKDMF 459
               +                 V+ +S NIKDMF
Sbjct: 241  GSRSGSGAKNTRNGKQAKKPKVETESRNIKDMF 273


>ref|XP_002517803.1| conserved hypothetical protein [Ricinus communis]
            gi|223543075|gb|EEF44610.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 299

 Score =  289 bits (739), Expect = 1e-75
 Identities = 146/263 (55%), Positives = 191/263 (72%), Gaps = 6/263 (2%)
 Frame = -1

Query: 1229 GVDNTRVLIAQDPSSSGKHGTMLSLRNPRTGTSTCYLYTDGVLQELHWFKQTHGSWFLGD 1050
            G+D TR+LIA   ++ G  G +LSL++P++G +TCYL  + +LQELHWFKQ++ SWFLGD
Sbjct: 31   GMDETRLLIAHSANADGV-GRLLSLQHPKSGKTTCYLLNNRMLQELHWFKQSYTSWFLGD 89

Query: 1049 YVCEDGRLYTATPVDPVFILLPIFEEARMKKDHEPGKFRQLDEIIYIHGYPGYQSLSSTA 870
            YVC+DG LY+ATPVDPVFILLPIFEEARM+K  +PGKFRQLDEI++I+GYPGY+ L   A
Sbjct: 90   YVCQDGCLYSATPVDPVFILLPIFEEARMRKGDDPGKFRQLDEILFINGYPGYRYLMPIA 149

Query: 869  EKTMQIVCDLKEVGSTKFFRLNDLKVLKWLCYKVHRLKQTLPTLDKNYAARDEKDTLFEA 690
            E  MQ+VC++KE+GS+KFFRLND KV  WL  KV +LKQ + +LDKNYAA+DEK+TL +A
Sbjct: 150  ENCMQVVCEIKEIGSSKFFRLNDSKVFAWLLCKVSQLKQAVSSLDKNYAAQDEKNTLADA 209

Query: 689  VSIVREYVKDEPWVNLLCSKLKLNL--EVEIVPPS----IESGAASFNPVQENNXXXXXX 528
            + I+ EY+KDEPW+ LLC+ LKLNL      VP +     E+  AS N +QE        
Sbjct: 210  IMILGEYLKDEPWLKLLCNHLKLNLLEATRKVPDAETSLTENNPASSNLMQEKGKNDGKT 269

Query: 527  XXXXXXXXXXXVDKDSHNIKDMF 459
                       V+ +S NI++MF
Sbjct: 270  KRTGKQAKKAKVETESLNIREMF 292


>ref|XP_003522673.1| PREDICTED: ribonuclease H2 subunit B-like [Glycine max]
          Length = 276

 Score =  285 bits (728), Expect = 3e-74
 Identities = 140/269 (52%), Positives = 189/269 (70%), Gaps = 7/269 (2%)
 Frame = -1

Query: 1244 MAWWEGVDNTRVLIAQDPSSSGKH-GTMLSLRNPRTGTSTCYLYTDGVLQELHWFKQTHG 1068
            M+W +GV   RVL+A DP +     G M+ LR+P++G +T YL+ +G+L EL WFK  +G
Sbjct: 1    MSWCDGVLEPRVLVAPDPGTDRNGLGQMILLRHPKSGNATQYLFVNGILLELQWFKNLYG 60

Query: 1067 SWFLGDYVCEDGRLYTATPVDPVFILLPIFEEARMKKDHEPGKFRQLDEIIYIHGYPGYQ 888
            SWFLGDY+ EDGRLY +TP+DPVFI+LPIF+EARMKK  + G+FRQLDEI+++ GYPGY 
Sbjct: 61   SWFLGDYITEDGRLYLSTPIDPVFIMLPIFKEARMKKGDDLGRFRQLDEILFVDGYPGYM 120

Query: 887  SLSSTAEKTMQIVCDLKEVGSTKFFRLNDLKVLKWLCYKVHRLKQTLPTLDKNYAARDEK 708
             L S  E  MQ+V ++ EVGS+KFFRL+D KVL+WLCYKV +LKQTLP LDKNYA + EK
Sbjct: 121  QLMSIVENCMQVVSEIIEVGSSKFFRLDDSKVLRWLCYKVCQLKQTLPKLDKNYAVQSEK 180

Query: 707  DTLFEAVSIVREYVKDEPWVNLLCSKLKLNLEVEIVPPSIESGAASFNP------VQENN 546
            DTL +AVSI+ EY+K+EPW+ LLC+ LKLN+ +E+   +  +   + N        +++N
Sbjct: 181  DTLIDAVSILGEYLKEEPWLQLLCNHLKLNI-LEVTGKAQANAEGNNNSRLCNELQEQSN 239

Query: 545  XXXXXXXXXXXXXXXXXVDKDSHNIKDMF 459
                             ++ +SHNIKDMF
Sbjct: 240  DKKGTTAKKGRQAKKVKLETESHNIKDMF 268


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