BLASTX nr result

ID: Scutellaria24_contig00016879 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00016879
         (352 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266698.1| PREDICTED: pentatricopeptide repeat-containi...    84   1e-14
emb|CBI15289.3| unnamed protein product [Vitis vinifera]               75   7e-12

>ref|XP_002266698.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74750
           [Vitis vinifera]
          Length = 875

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 50/121 (41%), Positives = 76/121 (62%), Gaps = 6/121 (4%)
 Frame = -1

Query: 346 SGSNFTDVPGGAKGRGDRSDSLKGVANESNNASKNFVETRGLSSEARDKKRSIPQRSKAY 167
           + SN T      +G+GD+S S+KG ++  +  ++N V+TR LSS+  + KRS+PQ+SKAY
Sbjct: 204 AASNSTSSYHSTRGKGDKSGSVKGCSHVGDTWTRNTVDTRSLSSDTHN-KRSMPQKSKAY 262

Query: 166 SN------RFIPNTQQSEGKLSDNNSEGFSRAMRQTKVIAGAAPMARKYMSCSSVVESVS 5
           SN       F  N + SE +     + GFS+ +R TK+I G AP++R++ S   VVE+VS
Sbjct: 263 SNYSTSNSNFNSNVRNSEPRFVGGIAGGFSKPLRDTKMI-GIAPVSRQFGSSGHVVENVS 321

Query: 4   R 2
           R
Sbjct: 322 R 322


>emb|CBI15289.3| unnamed protein product [Vitis vinifera]
          Length = 793

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 47/115 (40%), Positives = 70/115 (60%)
 Frame = -1

Query: 346 SGSNFTDVPGGAKGRGDRSDSLKGVANESNNASKNFVETRGLSSEARDKKRSIPQRSKAY 167
           + SN T      +G+GD+S S+KG ++  +  ++N V+TR LSS+  + KRS+PQ+SKAY
Sbjct: 231 AASNSTSSYHSTRGKGDKSGSVKGCSHVGDTWTRNTVDTRSLSSDTHN-KRSMPQKSKAY 289

Query: 166 SNRFIPNTQQSEGKLSDNNSEGFSRAMRQTKVIAGAAPMARKYMSCSSVVESVSR 2
           SN             S +NS   S  +R TK+I G AP++R++ S   VVE+VSR
Sbjct: 290 SN------------YSTSNSNFNSNPLRDTKMI-GIAPVSRQFGSSGHVVENVSR 331


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