BLASTX nr result

ID: Scutellaria24_contig00016822 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00016822
         (273 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002304853.1| predicted protein [Populus trichocarpa] gi|2...    75   7e-12
emb|CBI16537.3| unnamed protein product [Vitis vinifera]               64   1e-08
emb|CAN78881.1| hypothetical protein VITISV_024992 [Vitis vinifera]    64   1e-08
ref|XP_003601606.1| Mediator of RNA polymerase II transcription ...    56   3e-06

>ref|XP_002304853.1| predicted protein [Populus trichocarpa] gi|222842285|gb|EEE79832.1|
           predicted protein [Populus trichocarpa]
          Length = 1538

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 37/63 (58%), Positives = 43/63 (68%)
 Frame = -3

Query: 193 STISNVDGPLSVTDWCRGRSPSNESAMACDGLSSESIASASEGRDSSSAVTLSVGEPMSP 14
           S   N+DGPL VTDWC+GR  S + A  CDGL  ES  S    +DSSS VTL VGEPMSP
Sbjct: 587 SAFGNLDGPLCVTDWCKGRFQSGDGATTCDGLIGESTLSGC--KDSSSIVTLPVGEPMSP 644

Query: 13  SLT 5
           +L+
Sbjct: 645 ALS 647


>emb|CBI16537.3| unnamed protein product [Vitis vinifera]
          Length = 1812

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 34/64 (53%), Positives = 42/64 (65%)
 Frame = -3

Query: 193  STISNVDGPLSVTDWCRGRSPSNESAMACDGLSSESIASASEGRDSSSAVTLSVGEPMSP 14
            S    +DGPLS TDWC+GRS S +     DG S+E     +EGRDSSS VT  +GEP+SP
Sbjct: 1019 SAFGILDGPLSATDWCKGRSQSGDVGTTGDGFSAEH--GVNEGRDSSSTVT--IGEPISP 1074

Query: 13   SLTS 2
            S +S
Sbjct: 1075 SQSS 1078


>emb|CAN78881.1| hypothetical protein VITISV_024992 [Vitis vinifera]
          Length = 1154

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 34/64 (53%), Positives = 42/64 (65%)
 Frame = -3

Query: 193  STISNVDGPLSVTDWCRGRSPSNESAMACDGLSSESIASASEGRDSSSAVTLSVGEPMSP 14
            S    +DGPLS TDWC+GRS S +     DG S+E     +EGRDSSS VT  +GEP+SP
Sbjct: 1034 SAFGILDGPLSATDWCKGRSQSGDVGTTGDGFSAEH--GVNEGRDSSSTVT--IGEPISP 1089

Query: 13   SLTS 2
            S +S
Sbjct: 1090 SQSS 1093


>ref|XP_003601606.1| Mediator of RNA polymerase II transcription subunit [Medicago
            truncatula] gi|355490654|gb|AES71857.1| Mediator of RNA
            polymerase II transcription subunit [Medicago truncatula]
          Length = 2052

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 32/64 (50%), Positives = 41/64 (64%)
 Frame = -3

Query: 193  STISNVDGPLSVTDWCRGRSPSNESAMACDGLSSESIASASEGRDSSSAVTLSVGEPMSP 14
            S  +N++GPLSVTDWC+GRS   +     DG+S+ES  S SE RDSS        EP+SP
Sbjct: 1120 SAFTNLEGPLSVTDWCKGRSQLVDPGSMVDGVSAES--SISECRDSS--------EPLSP 1169

Query: 13   SLTS 2
            S +S
Sbjct: 1170 SQSS 1173