BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00016810
         (1171 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAY68200.1| RNA polymerase IV second largest subunit [Antirrh...   611   e-173
ref|XP_002515428.1| DNA-directed RNA polymerase subunit, putativ...   578   e-163
gb|AAY68198.1| RNA polymerase IV second largest subunit [Rhodode...   576   e-162
ref|XP_004145500.1| PREDICTED: DNA-directed RNA polymerase D sub...   568   e-159
emb|CBI21137.3| unnamed protein product [Vitis vinifera]              566   e-159

>gb|AAY68200.1| RNA polymerase IV second largest subunit [Antirrhinum majus]
          Length = 821

 Score =  611 bits (1576), Expect = e-173
 Identities = 297/333 (89%), Positives = 311/333 (93%)
 Frame = -3

Query: 1169 FGKMPSKIGRVDSLDDDGFPYIGANLQTGDIVIGKHAASGVDHSIKLKHTERGMVQKVVL 990
            FGK  SKIGRVDSLDDDGFP+IGANLQTGDIVIGKHAASGVDHSIKLKHTERGMVQKVVL
Sbjct: 489  FGKTESKIGRVDSLDDDGFPFIGANLQTGDIVIGKHAASGVDHSIKLKHTERGMVQKVVL 548

Query: 989  SANDEGKNFAVVSLRQVRTPCLGDKFSSMHGQKGVLGFLESQENFPFTKQGIVPDIVINP 810
            S+ND+GKNF VVSLRQVR+PCLGDKFSSMHGQKGVLGFLESQENFPFTK+GIVPDIVINP
Sbjct: 549  SSNDDGKNFGVVSLRQVRSPCLGDKFSSMHGQKGVLGFLESQENFPFTKEGIVPDIVINP 608

Query: 809  HAFPSRQTPGQXXXXXXXXXXXXXXXLKYATPFSTPSVEDITSQLHRLGFTRWGNERVYD 630
            HAFPSRQTPGQ               LKYATPFSTPSV+DIT+QLHRLGF+RWG+ERVYD
Sbjct: 609  HAFPSRQTPGQLLEAALGKGIALGGALKYATPFSTPSVDDITAQLHRLGFSRWGDERVYD 668

Query: 629  GRTGEMVDSLIFMGPTCYQRLTHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEME 450
            GRTGE V+SLIFMGPT YQRLTHMAEDK+KFRNTGPVHPLTRQPVADRKRFGGIKFGEME
Sbjct: 669  GRTGEKVESLIFMGPTFYQRLTHMAEDKIKFRNTGPVHPLTRQPVADRKRFGGIKFGEME 728

Query: 449  RDCLIAHGAAANLHERLFTLSDSSQMHICRKCQNMANVIQRPVFGGRKIRGPFCRFCDSV 270
            RDCLIAHGAAANLHERLFTLSDSSQMH+CRKCQNMANVIQR VFGGRKIRGP+CRFCDSV
Sbjct: 729  RDCLIAHGAAANLHERLFTLSDSSQMHVCRKCQNMANVIQRSVFGGRKIRGPYCRFCDSV 788

Query: 269  EHVVRVNVPYGAKLLCQELFSMGISLKFDTELC 171
            E VVR+NVPYGAKLLCQELFSMGISLKFDTELC
Sbjct: 789  EDVVRLNVPYGAKLLCQELFSMGISLKFDTELC 821


>ref|XP_002515428.1| DNA-directed RNA polymerase subunit, putative [Ricinus communis]
            gi|223545372|gb|EEF46877.1| DNA-directed RNA polymerase
            subunit, putative [Ricinus communis]
          Length = 1203

 Score =  578 bits (1491), Expect = e-163
 Identities = 282/333 (84%), Positives = 304/333 (91%)
 Frame = -3

Query: 1169 FGKMPSKIGRVDSLDDDGFPYIGANLQTGDIVIGKHAASGVDHSIKLKHTERGMVQKVVL 990
            FGK+PSKIGRVDSLDDDGFP+IGANLQ+GDIVIG+ A SG DHSIKLKHTERGMVQKVVL
Sbjct: 871  FGKIPSKIGRVDSLDDDGFPFIGANLQSGDIVIGRCAESGPDHSIKLKHTERGMVQKVVL 930

Query: 989  SANDEGKNFAVVSLRQVRTPCLGDKFSSMHGQKGVLGFLESQENFPFTKQGIVPDIVINP 810
            S+NDEGKNFAVVSLRQVR+PCLGDKFSSMHGQKGVLGFLESQENFPFT+QGIVPDIVINP
Sbjct: 931  SSNDEGKNFAVVSLRQVRSPCLGDKFSSMHGQKGVLGFLESQENFPFTRQGIVPDIVINP 990

Query: 809  HAFPSRQTPGQXXXXXXXXXXXXXXXLKYATPFSTPSVEDITSQLHRLGFTRWGNERVYD 630
            H+FPSRQTPGQ               +KYATPFST SVE IT+QLHR GF+RWGNERVY+
Sbjct: 991  HSFPSRQTPGQLLEAALGKGIACGGSMKYATPFSTLSVEAITNQLHRAGFSRWGNERVYN 1050

Query: 629  GRTGEMVDSLIFMGPTCYQRLTHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEME 450
            GRTGEMV SLIFMGPT YQRL HMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEME
Sbjct: 1051 GRTGEMVRSLIFMGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEME 1110

Query: 449  RDCLIAHGAAANLHERLFTLSDSSQMHICRKCQNMANVIQRPVFGGRKIRGPFCRFCDSV 270
            RDCLIAHGA+ANLHERLFTLSDSSQMHIC+KC+N+ANVIQR V GGRKIRGP+CR C+SV
Sbjct: 1111 RDCLIAHGASANLHERLFTLSDSSQMHICQKCKNVANVIQRAVPGGRKIRGPYCRVCESV 1170

Query: 269  EHVVRVNVPYGAKLLCQELFSMGISLKFDTELC 171
            + +V+VNVPYGAKLLCQELFSMGISLKF+T LC
Sbjct: 1171 DEIVKVNVPYGAKLLCQELFSMGISLKFETRLC 1203


>gb|AAY68198.1| RNA polymerase IV second largest subunit [Rhododendron macrophyllum]
          Length = 1019

 Score =  576 bits (1484), Expect = e-162
 Identities = 280/332 (84%), Positives = 299/332 (90%)
 Frame = -3

Query: 1169 FGKMPSKIGRVDSLDDDGFPYIGANLQTGDIVIGKHAASGVDHSIKLKHTERGMVQKVVL 990
            FGK+ SKIGRVDSLDDDGFP+IGANLQ GDIV+G+ A SG DHSIKLKHTERGMVQKVVL
Sbjct: 687  FGKVQSKIGRVDSLDDDGFPFIGANLQNGDIVVGRCAESGADHSIKLKHTERGMVQKVVL 746

Query: 989  SANDEGKNFAVVSLRQVRTPCLGDKFSSMHGQKGVLGFLESQENFPFTKQGIVPDIVINP 810
            SANDEGKNFAVVSLRQVRTPCLGDKFSSMHGQKGVLGFLESQENFPFT QGIVPDIV+NP
Sbjct: 747  SANDEGKNFAVVSLRQVRTPCLGDKFSSMHGQKGVLGFLESQENFPFTIQGIVPDIVVNP 806

Query: 809  HAFPSRQTPGQXXXXXXXXXXXXXXXLKYATPFSTPSVEDITSQLHRLGFTRWGNERVYD 630
            HAFPSRQTPGQ                KYATPFST SV+ +T QLHR GF+RWG+ERVY+
Sbjct: 807  HAFPSRQTPGQLLEAALGKGIACGGLQKYATPFSTLSVDAVTDQLHRAGFSRWGSERVYN 866

Query: 629  GRTGEMVDSLIFMGPTCYQRLTHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEME 450
            GRTGEM+ SL+FMGPT YQRLTHM+EDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEME
Sbjct: 867  GRTGEMIHSLVFMGPTFYQRLTHMSEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEME 926

Query: 449  RDCLIAHGAAANLHERLFTLSDSSQMHICRKCQNMANVIQRPVFGGRKIRGPFCRFCDSV 270
            RDCLIAHGAAANLHERLFTLSDSSQMHICRKC N+ANVIQR V GGRKIRGP+CRFC+SV
Sbjct: 927  RDCLIAHGAAANLHERLFTLSDSSQMHICRKCNNIANVIQRAVPGGRKIRGPYCRFCESV 986

Query: 269  EHVVRVNVPYGAKLLCQELFSMGISLKFDTEL 174
            E +VRVNVPYGAKLL QELFSMGI++KFDTEL
Sbjct: 987  EEIVRVNVPYGAKLLAQELFSMGITMKFDTEL 1018


>ref|XP_004145500.1| PREDICTED: DNA-directed RNA polymerase D subunit 2a-like [Cucumis
            sativus]
          Length = 1197

 Score =  568 bits (1463), Expect = e-159
 Identities = 275/333 (82%), Positives = 301/333 (90%)
 Frame = -3

Query: 1169 FGKMPSKIGRVDSLDDDGFPYIGANLQTGDIVIGKHAASGVDHSIKLKHTERGMVQKVVL 990
            FGK  SKIGRVDSLDDDGFPYIGANLQ+GDIVIG+ A SG DHSIKLKHTE+GMVQKVVL
Sbjct: 865  FGKTQSKIGRVDSLDDDGFPYIGANLQSGDIVIGRCAESGADHSIKLKHTEKGMVQKVVL 924

Query: 989  SANDEGKNFAVVSLRQVRTPCLGDKFSSMHGQKGVLGFLESQENFPFTKQGIVPDIVINP 810
            S+ND+GKN+AVVSLRQVR+PCLGDKFSSMHGQKGVLGFLESQENFPFT QGIVPDIVINP
Sbjct: 925  SSNDDGKNYAVVSLRQVRSPCLGDKFSSMHGQKGVLGFLESQENFPFTIQGIVPDIVINP 984

Query: 809  HAFPSRQTPGQXXXXXXXXXXXXXXXLKYATPFSTPSVEDITSQLHRLGFTRWGNERVYD 630
            HAFPSRQTPGQ               LKYATPFSTPSV+ IT QLHR GF+RWG+ERVY+
Sbjct: 985  HAFPSRQTPGQLLEAALGKGIAAGGSLKYATPFSTPSVDAITDQLHRAGFSRWGSERVYN 1044

Query: 629  GRTGEMVDSLIFMGPTCYQRLTHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEME 450
            GRTGEM+ SLIFMGPT YQRL HMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEME
Sbjct: 1045 GRTGEMMRSLIFMGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEME 1104

Query: 449  RDCLIAHGAAANLHERLFTLSDSSQMHICRKCQNMANVIQRPVFGGRKIRGPFCRFCDSV 270
            RDCLIAHGA+ANLHERLFTLSDSSQMH+C+KC+N+A+VIQR V GGRK+RGP+CR C+S 
Sbjct: 1105 RDCLIAHGASANLHERLFTLSDSSQMHVCQKCKNVASVIQRSVAGGRKMRGPYCRVCESF 1164

Query: 269  EHVVRVNVPYGAKLLCQELFSMGISLKFDTELC 171
            + +VRVNVPYGAKLLCQELFSMGI+LKF+T+LC
Sbjct: 1165 DDIVRVNVPYGAKLLCQELFSMGINLKFETQLC 1197


>emb|CBI21137.3| unnamed protein product [Vitis vinifera]
          Length = 1220

 Score =  566 bits (1459), Expect = e-159
 Identities = 275/333 (82%), Positives = 300/333 (90%)
 Frame = -3

Query: 1169 FGKMPSKIGRVDSLDDDGFPYIGANLQTGDIVIGKHAASGVDHSIKLKHTERGMVQKVVL 990
            FGKM SKIGRVDSLDDDGFP+IGANLQ GDIVIG+ A SGVDHSIKLKHTERGMVQKVV+
Sbjct: 888  FGKMQSKIGRVDSLDDDGFPFIGANLQNGDIVIGRCAESGVDHSIKLKHTERGMVQKVVV 947

Query: 989  SANDEGKNFAVVSLRQVRTPCLGDKFSSMHGQKGVLGFLESQENFPFTKQGIVPDIVINP 810
            SAND+GKNFAVVSLRQVRTPCLGDKFSSMHGQKGVLGFLESQENFPFT QGIVPDIVINP
Sbjct: 948  SANDDGKNFAVVSLRQVRTPCLGDKFSSMHGQKGVLGFLESQENFPFTIQGIVPDIVINP 1007

Query: 809  HAFPSRQTPGQXXXXXXXXXXXXXXXLKYATPFSTPSVEDITSQLHRLGFTRWGNERVYD 630
            HAFPSRQTPGQ               L++ATPFST SV+ I  QLHR GF+RWG+ERVY+
Sbjct: 1008 HAFPSRQTPGQLLEAALGKGIACGGLLRHATPFSTLSVDAIADQLHRAGFSRWGHERVYN 1067

Query: 629  GRTGEMVDSLIFMGPTCYQRLTHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEME 450
            GRTGEM+ SLIFMGPT YQRL HMAEDKVKFRNTGPVHPLTRQPV+DRKRFGGIKFGEME
Sbjct: 1068 GRTGEMLRSLIFMGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVSDRKRFGGIKFGEME 1127

Query: 449  RDCLIAHGAAANLHERLFTLSDSSQMHICRKCQNMANVIQRPVFGGRKIRGPFCRFCDSV 270
            RDCLIAHGAAANLHERLFTLSDS+ MHICR+C+N++NVIQR V GGRK+RGP+CR+C+S 
Sbjct: 1128 RDCLIAHGAAANLHERLFTLSDSAYMHICRRCKNISNVIQRSVAGGRKVRGPYCRYCESS 1187

Query: 269  EHVVRVNVPYGAKLLCQELFSMGISLKFDTELC 171
            E +V+VNVPYGAKLLCQELFSMGISLKF+T+LC
Sbjct: 1188 EEIVKVNVPYGAKLLCQELFSMGISLKFETQLC 1220