BLASTX nr result

ID: Scutellaria24_contig00016738 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00016738
         (346 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI29799.3| unnamed protein product [Vitis vinifera]              193   1e-47
ref|XP_002278785.1| PREDICTED: DNA helicase INO80-like [Vitis vi...   193   1e-47
ref|XP_003554159.1| PREDICTED: DNA helicase INO80-like isoform 1...   188   3e-46
ref|XP_002323271.1| chromatin remodeling complex subunit [Populu...   185   3e-45
ref|XP_002308925.1| chromatin remodeling complex subunit [Populu...   184   5e-45

>emb|CBI29799.3| unnamed protein product [Vitis vinifera]
          Length = 1557

 Score =  193 bits (491), Expect = 1e-47
 Identities = 97/115 (84%), Positives = 103/115 (89%), Gaps = 1/115 (0%)
 Frame = -3

Query: 344 KMLSAFDNECLKLRQVADVDALIPDVS-VAESSNIDLLHPSTMPVASTVRTPNLFKGFLK 168
           ++ SAFDNECLKLRQ A+ +   PD S  A SSNIDLLHPSTMPVAS+V+TP LFKG LK
Sbjct: 536 RLTSAFDNECLKLRQAAEPEVPSPDASGAAGSSNIDLLHPSTMPVASSVQTPELFKGSLK 595

Query: 167 EYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLAEEKNIWGPFLVVA 3
           EYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLAEEKNIWGPFLVVA
Sbjct: 596 EYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLAEEKNIWGPFLVVA 650


>ref|XP_002278785.1| PREDICTED: DNA helicase INO80-like [Vitis vinifera]
          Length = 1563

 Score =  193 bits (491), Expect = 1e-47
 Identities = 97/115 (84%), Positives = 103/115 (89%), Gaps = 1/115 (0%)
 Frame = -3

Query: 344 KMLSAFDNECLKLRQVADVDALIPDVS-VAESSNIDLLHPSTMPVASTVRTPNLFKGFLK 168
           ++ SAFDNECLKLRQ A+ +   PD S  A SSNIDLLHPSTMPVAS+V+TP LFKG LK
Sbjct: 536 RLTSAFDNECLKLRQAAEPEVPSPDASGAAGSSNIDLLHPSTMPVASSVQTPELFKGSLK 595

Query: 167 EYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLAEEKNIWGPFLVVA 3
           EYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLAEEKNIWGPFLVVA
Sbjct: 596 EYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLAEEKNIWGPFLVVA 650


>ref|XP_003554159.1| PREDICTED: DNA helicase INO80-like isoform 1 [Glycine max]
          Length = 1531

 Score =  188 bits (478), Expect = 3e-46
 Identities = 95/113 (84%), Positives = 100/113 (88%)
 Frame = -3

Query: 341 MLSAFDNECLKLRQVADVDALIPDVSVAESSNIDLLHPSTMPVASTVRTPNLFKGFLKEY 162
           + SAFD ECL+LRQ  + D+L PDV  A +SNIDL  PSTMPVASTVRTP LFKG LKEY
Sbjct: 537 LTSAFDTECLRLRQAGETDSLPPDV--AGASNIDLQTPSTMPVASTVRTPELFKGVLKEY 594

Query: 161 QLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLAEEKNIWGPFLVVA 3
           QLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLAEEKNIWGPFLVVA
Sbjct: 595 QLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLAEEKNIWGPFLVVA 647


>ref|XP_002323271.1| chromatin remodeling complex subunit [Populus trichocarpa]
           gi|222867901|gb|EEF05032.1| chromatin remodeling complex
           subunit [Populus trichocarpa]
          Length = 1540

 Score =  185 bits (470), Expect = 3e-45
 Identities = 94/118 (79%), Positives = 101/118 (85%), Gaps = 5/118 (4%)
 Frame = -3

Query: 341 MLSAFDNECLKLRQVADVDALIPDVSVAESSNIDLLHPSTMPVASTVRTPNLFKGFLKEY 162
           + SAFD+EC KLR+VAD++  I D SVA SSNIDL  PSTMPV STV+TP LFKG LKEY
Sbjct: 538 LTSAFDSECSKLREVADIEGPITDASVAGSSNIDLQTPSTMPVTSTVKTPELFKGSLKEY 597

Query: 161 QLKGLQWLVNCYE-----QGLNGILADEMGLGKTIQAMAFLAHLAEEKNIWGPFLVVA 3
           QLKGLQWLVNCYE     QGLNGILADEMGLGKTIQAMAFLAHLAEEKNIWGPFL+VA
Sbjct: 598 QLKGLQWLVNCYEQSMLSQGLNGILADEMGLGKTIQAMAFLAHLAEEKNIWGPFLIVA 655


>ref|XP_002308925.1| chromatin remodeling complex subunit [Populus trichocarpa]
           gi|222854901|gb|EEE92448.1| chromatin remodeling complex
           subunit [Populus trichocarpa]
          Length = 1483

 Score =  184 bits (468), Expect = 5e-45
 Identities = 91/113 (80%), Positives = 98/113 (86%)
 Frame = -3

Query: 341 MLSAFDNECLKLRQVADVDALIPDVSVAESSNIDLLHPSTMPVASTVRTPNLFKGFLKEY 162
           + SAFD EC KLR+ AD++  I D SVA SSNIDL  PSTMPV STV+ P LF+G LKEY
Sbjct: 549 LTSAFDIECSKLREAADIEGPINDASVAGSSNIDLQTPSTMPVTSTVQAPELFRGSLKEY 608

Query: 161 QLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLAEEKNIWGPFLVVA 3
           QLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLAEEKNIWGPFL+VA
Sbjct: 609 QLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLAEEKNIWGPFLIVA 661


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