BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00016645
         (1390 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN81292.1| hypothetical protein VITISV_005315 [Vitis vinifera]   654   0.0  
ref|XP_002519045.1| tfiih, polypeptide, putative [Ricinus commun...   646   0.0  
ref|XP_004134713.1| PREDICTED: general transcription factor IIH ...   642   0.0  
ref|XP_003637396.1| General transcription factor IIH subunit [Me...   615   e-174
ref|XP_002305144.1| predicted protein [Populus trichocarpa] gi|2...   614   e-173

>emb|CAN81292.1| hypothetical protein VITISV_005315 [Vitis vinifera]
          Length = 451

 Score =  654 bits (1686), Expect = 0.0
 Identities = 320/407 (78%), Positives = 368/407 (90%)
 Frame = +2

Query: 2    KYVLQLLYMDGPVLAKWLEEWVLPDGASKHRVAIDRLIQLRILTETVERKKEATYLFNPT 181
            KY+LQ+LY+D PV AK +EEWVL DG SKHRVAIDRLIQLR+ TET +RKKE +Y  NPT
Sbjct: 46   KYILQMLYIDVPVTAKAMEEWVLADGFSKHRVAIDRLIQLRVFTETSDRKKETSYRLNPT 105

Query: 182  FQRNLQKHIVHGGVLPREPMPSNITVRLPSLEELDAYAVQQWEFFLLHLINSSEAERSTN 361
            FQ NLQKH+++GGVLPREPMPSNITVRLPSL++L+AYA+ QWE FLL LI+S++ E+ TN
Sbjct: 106  FQTNLQKHLIYGGVLPREPMPSNITVRLPSLDDLEAYALGQWECFLLQLISSTQTEKLTN 165

Query: 362  ISSSMMKVFQRGLLNQKDDREPPKLTESGFQFLLMDTNAQLWYIIREYITNCEEHGVDTA 541
             SSS+MKVFQRGLL Q++ +E P+LTESGFQFLLMDTNAQLWYI+REYI+N EE GVD A
Sbjct: 166  FSSSLMKVFQRGLLTQRE-KEAPRLTESGFQFLLMDTNAQLWYIMREYISNSEERGVDPA 224

Query: 542  DLISFLLELSFHIMGKAYNLNTLSDTQRSIIKDLVDLGLVKLQQGRKEGWFIPTKLATNL 721
            DLISFLLELSFH+ G+AYN+NTL++ QR+ IKDLVDLGLVKLQQGRKE WFIPTKLATNL
Sbjct: 225  DLISFLLELSFHVTGEAYNINTLTEFQRNTIKDLVDLGLVKLQQGRKESWFIPTKLATNL 284

Query: 722  SISLADTTTRKQGFVVVETNFRMYAYSTSKLHCEILRLFSRIEYQLPNLIVGAITKESLY 901
            S+SL+DT++RKQGFVVVETNFR+YAYS+SKLHCEILRLFSR+EYQLPNLIVGAITKESLY
Sbjct: 285  SMSLSDTSSRKQGFVVVETNFRLYAYSSSKLHCEILRLFSRVEYQLPNLIVGAITKESLY 344

Query: 902  KAFLNGITADQIVSFLQQNAHPRVAERIPSVPENVTDQIRLWEADLNRVEIMPASLIDEF 1081
             AF NGITA+QI+SFLQQNAHPRVAER P+VPENVTDQIRLWE DLNRVE MP+ L DEF
Sbjct: 345  NAFENGITAEQIISFLQQNAHPRVAERTPAVPENVTDQIRLWETDLNRVETMPSHLYDEF 404

Query: 1082 PSREVFEAACDFAREYGGLLWESSKRMRLVVKAEVFGQMKEFLRKHK 1222
            PSR+VFEAACDFAREYGGLLWE SK+MRLVVKAE+   M+E+LR+ K
Sbjct: 405  PSRDVFEAACDFAREYGGLLWEDSKKMRLVVKAEIHLHMREYLRRSK 451


>ref|XP_002519045.1| tfiih, polypeptide, putative [Ricinus communis]
            gi|223541708|gb|EEF43256.1| tfiih, polypeptide, putative
            [Ricinus communis]
          Length = 451

 Score =  646 bits (1666), Expect = 0.0
 Identities = 317/407 (77%), Positives = 363/407 (89%)
 Frame = +2

Query: 2    KYVLQLLYMDGPVLAKWLEEWVLPDGASKHRVAIDRLIQLRILTETVERKKEATYLFNPT 181
            KYV+Q+LY+DGPV  K LEEW+LPDG+SKHRVAIDRL QLRI TE V+RKKE +Y  NPT
Sbjct: 46   KYVVQILYIDGPVADKTLEEWLLPDGSSKHRVAIDRLTQLRIFTEIVDRKKEISYKLNPT 105

Query: 182  FQRNLQKHIVHGGVLPREPMPSNITVRLPSLEELDAYAVQQWEFFLLHLINSSEAERSTN 361
            FQ NLQKH++ GGVLP EP+ SNI VRLP+LEELD YA+ QWE FLLHLINS  AERSTN
Sbjct: 106  FQTNLQKHLIDGGVLPGEPLASNIAVRLPTLEELDTYALGQWECFLLHLINSGHAERSTN 165

Query: 362  ISSSMMKVFQRGLLNQKDDREPPKLTESGFQFLLMDTNAQLWYIIREYITNCEEHGVDTA 541
             SSSMMK+FQRGLL Q+D +E P+LTESGFQFLLMDTNAQLWYIIREYI+N EE G+D+A
Sbjct: 166  FSSSMMKIFQRGLLTQRD-KEAPRLTESGFQFLLMDTNAQLWYIIREYISNSEERGLDSA 224

Query: 542  DLISFLLELSFHIMGKAYNLNTLSDTQRSIIKDLVDLGLVKLQQGRKEGWFIPTKLATNL 721
            DLISFLLELSFHI G+AYN+  L++ QR++IKDL DLGLVKLQQGRKE WFIPTKLATNL
Sbjct: 225  DLISFLLELSFHITGEAYNMIMLTEFQRNMIKDLADLGLVKLQQGRKESWFIPTKLATNL 284

Query: 722  SISLADTTTRKQGFVVVETNFRMYAYSTSKLHCEILRLFSRIEYQLPNLIVGAITKESLY 901
            S+SL D+++RKQGFVVVETNFRMYAYSTSKLHCEI+RLFSR+EYQLPNL+VGA+TKESLY
Sbjct: 285  SMSLTDSSSRKQGFVVVETNFRMYAYSTSKLHCEIMRLFSRVEYQLPNLVVGAMTKESLY 344

Query: 902  KAFLNGITADQIVSFLQQNAHPRVAERIPSVPENVTDQIRLWEADLNRVEIMPASLIDEF 1081
             AF NGITA+QI+SFLQQNAHPRVAERIPSVPENVTDQIRLWE+D+NRVE+ PA L DEF
Sbjct: 345  SAFENGITAEQIISFLQQNAHPRVAERIPSVPENVTDQIRLWESDMNRVEMTPAHLYDEF 404

Query: 1082 PSREVFEAACDFAREYGGLLWESSKRMRLVVKAEVFGQMKEFLRKHK 1222
            PSR+VFEAAC+FAR++ GLLWE SKRMR+VVKAE+   M+E+LR  K
Sbjct: 405  PSRDVFEAACNFARDWNGLLWEDSKRMRMVVKAEIHLNMREYLRGQK 451


>ref|XP_004134713.1| PREDICTED: general transcription factor IIH subunit 4-like [Cucumis
            sativus]
          Length = 451

 Score =  642 bits (1656), Expect = 0.0
 Identities = 317/407 (77%), Positives = 363/407 (89%)
 Frame = +2

Query: 2    KYVLQLLYMDGPVLAKWLEEWVLPDGASKHRVAIDRLIQLRILTETVERKKEATYLFNPT 181
            K+VLQ+LY+DGPV AK +EEWVLPDG SK++VA+DRLIQLR+  ET +RK+E TY  NPT
Sbjct: 46   KFVLQMLYIDGPVSAKSMEEWVLPDGVSKYKVAVDRLIQLRVFIETADRKRETTYRLNPT 105

Query: 182  FQRNLQKHIVHGGVLPREPMPSNITVRLPSLEELDAYAVQQWEFFLLHLINSSEAERSTN 361
            FQ NLQK ++HG VL REPMPSNITVRLPSLE+L+AYA+ QWE FLL LINS +AE+ +N
Sbjct: 106  FQANLQKLLIHGEVLAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSN 165

Query: 362  ISSSMMKVFQRGLLNQKDDREPPKLTESGFQFLLMDTNAQLWYIIREYITNCEEHGVDTA 541
            ISSS+MKVFQ+GLL+Q+D +E P+LTESGFQFLLM+TNAQLWYIIREYI+N EE GVD A
Sbjct: 166  ISSSVMKVFQKGLLSQRD-KEAPRLTESGFQFLLMETNAQLWYIIREYISNAEERGVDPA 224

Query: 542  DLISFLLELSFHIMGKAYNLNTLSDTQRSIIKDLVDLGLVKLQQGRKEGWFIPTKLATNL 721
            DLISFLLELSFH+ G+AY+++TLSD QR  IKDL DLGLVKLQQGRKE WFIPTKLATNL
Sbjct: 225  DLISFLLELSFHVTGEAYDIDTLSDEQRYAIKDLADLGLVKLQQGRKESWFIPTKLATNL 284

Query: 722  SISLADTTTRKQGFVVVETNFRMYAYSTSKLHCEILRLFSRIEYQLPNLIVGAITKESLY 901
            S+SLAD+++RK GFVVVETNFRMYAYSTSKLHCEILRLFSRIEYQLPNLIVGAITKESLY
Sbjct: 285  SMSLADSSSRKLGFVVVETNFRMYAYSTSKLHCEILRLFSRIEYQLPNLIVGAITKESLY 344

Query: 902  KAFLNGITADQIVSFLQQNAHPRVAERIPSVPENVTDQIRLWEADLNRVEIMPASLIDEF 1081
             AF NGITA+QIV+FLQQNAHPRVAERIPSVPENVTDQIRLWE+DLNRV+I PA   DEF
Sbjct: 345  NAFKNGITAEQIVTFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHFYDEF 404

Query: 1082 PSREVFEAACDFAREYGGLLWESSKRMRLVVKAEVFGQMKEFLRKHK 1222
            PSREVFEAACD+ARE+ GLLWE SK +RLVVKA++   M+E LR+ K
Sbjct: 405  PSREVFEAACDYAREWNGLLWEDSKNLRLVVKADIHTHMREHLRRQK 451


>ref|XP_003637396.1| General transcription factor IIH subunit [Medicago truncatula]
            gi|355503331|gb|AES84534.1| General transcription factor
            IIH subunit [Medicago truncatula]
          Length = 451

 Score =  615 bits (1586), Expect = e-174
 Identities = 302/407 (74%), Positives = 354/407 (86%)
 Frame = +2

Query: 2    KYVLQLLYMDGPVLAKWLEEWVLPDGASKHRVAIDRLIQLRILTETVERKKEATYLFNPT 181
            KYVLQL ++DGPV AK L EWVLPDG SKH+VAIDRL+QL +  E ++ K   TY  NPT
Sbjct: 46   KYVLQLFHIDGPVPAKLLAEWVLPDGLSKHKVAIDRLVQLGVFVEALDSKNGKTYKVNPT 105

Query: 182  FQRNLQKHIVHGGVLPREPMPSNITVRLPSLEELDAYAVQQWEFFLLHLINSSEAERSTN 361
            +QR+LQK +VHGG LPRE MPSNITVRLP+LE+L+ YA++QWE FLL LI+ S  +++ N
Sbjct: 106  YQRSLQKLLVHGGTLPRESMPSNITVRLPTLEDLETYALEQWECFLLQLISPSHVDKTLN 165

Query: 362  ISSSMMKVFQRGLLNQKDDREPPKLTESGFQFLLMDTNAQLWYIIREYITNCEEHGVDTA 541
            ISSS+MKVFQR LL+Q+D RE PKLTESGFQFLLMDTNAQLWYIIREYITN EE GVD  
Sbjct: 166  ISSSLMKVFQRRLLSQRD-REAPKLTESGFQFLLMDTNAQLWYIIREYITNSEERGVDAG 224

Query: 542  DLISFLLELSFHIMGKAYNLNTLSDTQRSIIKDLVDLGLVKLQQGRKEGWFIPTKLATNL 721
            DLISF+LELSFH++G+AYN+NTL++ QR+IIKDL DLGLVKLQQGRKE WFIPTKLATNL
Sbjct: 225  DLISFMLELSFHVIGEAYNINTLTEFQRNIIKDLADLGLVKLQQGRKESWFIPTKLATNL 284

Query: 722  SISLADTTTRKQGFVVVETNFRMYAYSTSKLHCEILRLFSRIEYQLPNLIVGAITKESLY 901
            S+S+ ++++RK+GFVVVETNFR+YAYSTSKLHCEILRLFSR+EYQLPNLIVGAITKESLY
Sbjct: 285  SVSMTESSSRKEGFVVVETNFRVYAYSTSKLHCEILRLFSRVEYQLPNLIVGAITKESLY 344

Query: 902  KAFLNGITADQIVSFLQQNAHPRVAERIPSVPENVTDQIRLWEADLNRVEIMPASLIDEF 1081
             AF NGITADQIVSF +QNAHPRVA+RIP+VPENVTDQIRLWE+DLNRVE+  A   DEF
Sbjct: 345  NAFDNGITADQIVSFFRQNAHPRVAQRIPAVPENVTDQIRLWESDLNRVEMTEAYYYDEF 404

Query: 1082 PSREVFEAACDFAREYGGLLWESSKRMRLVVKAEVFGQMKEFLRKHK 1222
            PSR+VFE ACD ARE+ GLLWE SK+M LVVK+EV   +++FLR+ K
Sbjct: 405  PSRDVFEGACDCAREWSGLLWEDSKKMHLVVKSEVHTYVRDFLRRQK 451


>ref|XP_002305144.1| predicted protein [Populus trichocarpa] gi|222848108|gb|EEE85655.1|
            predicted protein [Populus trichocarpa]
          Length = 449

 Score =  614 bits (1584), Expect = e-173
 Identities = 302/407 (74%), Positives = 355/407 (87%)
 Frame = +2

Query: 2    KYVLQLLYMDGPVLAKWLEEWVLPDGASKHRVAIDRLIQLRILTETVERKKEATYLFNPT 181
            KYV+Q+L+ DGPV  K LE+WVL DG +KHRVAIDRLIQLRI  E  ++K+E++Y  N T
Sbjct: 46   KYVVQILFFDGPVSGKLLEQWVLADGVTKHRVAIDRLIQLRIFIEVSDKKRESSYKLNQT 105

Query: 182  FQRNLQKHIVHGGVLPREPMPSNITVRLPSLEELDAYAVQQWEFFLLHLINSSEAERSTN 361
            FQ NL+KH+ +GGVLPRE M +   V+LPSLEELD YA++QWE FLL LI+S +AE+ T+
Sbjct: 106  FQANLRKHLTNGGVLPRETMAA--VVKLPSLEELDTYALEQWECFLLLLISSGQAEKPTS 163

Query: 362  ISSSMMKVFQRGLLNQKDDREPPKLTESGFQFLLMDTNAQLWYIIREYITNCEEHGVDTA 541
            +SSSMMK+FQRGLL+Q+D R+ P+LTE GFQFLLMDTNAQLWYIIREYITN EE G + A
Sbjct: 164  LSSSMMKIFQRGLLSQRD-RDAPRLTEGGFQFLLMDTNAQLWYIIREYITNSEERGTEPA 222

Query: 542  DLISFLLELSFHIMGKAYNLNTLSDTQRSIIKDLVDLGLVKLQQGRKEGWFIPTKLATNL 721
            DLISFLLELSFH+ G+AYN+NTL++ QR+ IKDL +LGLVKLQQGRKE WFIPTKLATNL
Sbjct: 223  DLISFLLELSFHVTGEAYNMNTLTEIQRNTIKDLAELGLVKLQQGRKESWFIPTKLATNL 282

Query: 722  SISLADTTTRKQGFVVVETNFRMYAYSTSKLHCEILRLFSRIEYQLPNLIVGAITKESLY 901
            S+SL D+++RKQG+VVVETNFR+YAYS+SKLHCEILRLFS+IEYQLPNLIVGAITKESLY
Sbjct: 283  SVSLTDSSSRKQGYVVVETNFRLYAYSSSKLHCEILRLFSKIEYQLPNLIVGAITKESLY 342

Query: 902  KAFLNGITADQIVSFLQQNAHPRVAERIPSVPENVTDQIRLWEADLNRVEIMPASLIDEF 1081
             AF NGIT+DQI+SFLQQNAHPRVAER+PSVPENVTDQIRLWEADLNRVEI P+   DEF
Sbjct: 343  TAFENGITSDQIISFLQQNAHPRVAERLPSVPENVTDQIRLWEADLNRVEITPSHFYDEF 402

Query: 1082 PSREVFEAACDFAREYGGLLWESSKRMRLVVKAEVFGQMKEFLRKHK 1222
            PSR+ FEAACDFARE+ GLLWE SK+MR+VVKAE+   M+EFLR  K
Sbjct: 403  PSRDTFEAACDFAREWNGLLWEDSKKMRVVVKAEIHMNMREFLRGQK 449