BLASTX nr result

ID: Scutellaria24_contig00016642 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00016642
         (728 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269223.2| PREDICTED: pentatricopeptide repeat-containi...   151   2e-34
ref|XP_003528536.1| PREDICTED: protein Rf1, mitochondrial-like [...   150   2e-34
ref|XP_004157725.1| PREDICTED: LOW QUALITY PROTEIN: putative pen...   134   2e-29
ref|XP_003556653.1| PREDICTED: pentatricopeptide repeat-containi...   129   6e-28
ref|XP_002326842.1| predicted protein [Populus trichocarpa] gi|2...   126   5e-27

>ref|XP_002269223.2| PREDICTED: pentatricopeptide repeat-containing protein At5g39710-like
            [Vitis vinifera]
          Length = 889

 Score =  151 bits (381), Expect = 2e-34
 Identities = 72/142 (50%), Positives = 100/142 (70%)
 Frame = -2

Query: 727  LISSGMAPDVVTFNTLMNGVCHDILDRAMILTGKMLRMGFVPDLVTTNLLLSNLRKHGLP 548
            L+S+G+ P+ VT+N+++NGVC DILDRAMILT ++L+M FVP++VT NLLLS   K G+P
Sbjct: 747  LVSAGIVPNTVTYNSMLNGVCSDILDRAMILTARLLKMAFVPNVVTANLLLSQFYKQGMP 806

Query: 547  HRTAMWAQKLMEIPFEFDEITYKILDQVYRDLEEGVGYRKDITGKSLFLDLLMYITYEYI 368
             RT MW  KL EIP+ FDEITYKI+D+ +  LE+   + +  + KSLFLD LMYITY+Y 
Sbjct: 807  ERTLMWGHKLSEIPYAFDEITYKIMDKAHHILED-ADFSRVTSAKSLFLDFLMYITYDYF 865

Query: 367  HRNTLYQKKSCEPFEFTENQSS 302
             R   + + +  P +  +   S
Sbjct: 866  CRYRPHSETTQHPLKLIDRSYS 887


>ref|XP_003528536.1| PREDICTED: protein Rf1, mitochondrial-like [Glycine max]
          Length = 871

 Score =  150 bits (380), Expect = 2e-34
 Identities = 70/140 (50%), Positives = 101/140 (72%)
 Frame = -2

Query: 727  LISSGMAPDVVTFNTLMNGVCHDILDRAMILTGKMLRMGFVPDLVTTNLLLSNLRKHGLP 548
            LIS+G+ PD VT+NT+++G+C DILDRAMILT K+L+MGF+P+++TTN+LLS+  K G+P
Sbjct: 728  LISAGIVPDTVTYNTMLSGICSDILDRAMILTAKLLKMGFIPNVITTNMLLSHFCKQGMP 787

Query: 547  HRTAMWAQKLMEIPFEFDEITYKILDQVYRDLEEGVGYRKDITGKSLFLDLLMYITYEYI 368
             +  +W QKL EI F FDEI+Y+ILDQ Y  +++ V   +    K LF+D LMYIT++Y 
Sbjct: 788  EKALIWGQKLREISFGFDEISYRILDQAYCLMQDDVELVRGTYEKHLFMDFLMYITFDYF 847

Query: 367  HRNTLYQKKSCEPFEFTENQ 308
             RN   + ++    +  ENQ
Sbjct: 848  SRNKPQKIENENSIKLIENQ 867


>ref|XP_004157725.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
            repeat-containing protein At1g19290-like [Cucumis
            sativus]
          Length = 885

 Score =  134 bits (337), Expect = 2e-29
 Identities = 69/147 (46%), Positives = 96/147 (65%), Gaps = 1/147 (0%)
 Frame = -2

Query: 727  LISSGMAPDVVTFNTLMNGVCHDILDRAMILTGKMLRMGFVPDLVTTNLLLSNLRKHGLP 548
            LIS G+ P+ VT+NT++N VC+ ILD AMILT K+L+M FVP+ VT N+LLS   K G+P
Sbjct: 738  LISVGIVPNTVTYNTMINAVCNVILDHAMILTAKLLKMAFVPNTVTVNVLLSQFCKQGMP 797

Query: 547  HRTAMWAQKLMEIPFEFDEITYKILDQVYRDLEEGVGYRKDITGKSLFLDLLMYITYEYI 368
             +   W QKL EI  +FDE T+K++++ YR LEEG         KS+F+D LMYITY+Y 
Sbjct: 798  EKAIFWGQKLSEIHLDFDETTHKLMNRAYRALEEGGVVINTSYEKSVFMDFLMYITYDYF 857

Query: 367  HR-NTLYQKKSCEPFEFTENQSSMNVE 290
             R   L +K     F+ + +Q +  +E
Sbjct: 858  CRTKPLREKDDSSTFKTSFSQFNTLIE 884


>ref|XP_003556653.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
           mitochondrial-like [Glycine max]
          Length = 581

 Score =  129 bits (324), Expect = 6e-28
 Identities = 56/109 (51%), Positives = 84/109 (77%)
 Frame = -2

Query: 727 LISSGMAPDVVTFNTLMNGVCHDILDRAMILTGKMLRMGFVPDLVTTNLLLSNLRKHGLP 548
           LIS+G+ PD VT+NT+++G+C DILD AMI T K+L+MGF+P+++TTN+LLS+  K G+P
Sbjct: 471 LISAGIVPDTVTYNTMLSGICSDILDHAMIFTAKLLKMGFLPNVITTNMLLSHFCKQGMP 530

Query: 547 HRTAMWAQKLMEIPFEFDEITYKILDQVYRDLEEGVGYRKDITGKSLFL 401
            +  +W QKL EI F+FDEI+Y+I+DQ YR +++ V + +    K LF+
Sbjct: 531 EKALIWGQKLREISFDFDEISYQIMDQAYRLMQDDVEFVRGTYEKGLFM 579


>ref|XP_002326842.1| predicted protein [Populus trichocarpa] gi|222835157|gb|EEE73592.1|
           predicted protein [Populus trichocarpa]
          Length = 726

 Score =  126 bits (316), Expect = 5e-27
 Identities = 56/96 (58%), Positives = 78/96 (81%)
 Frame = -2

Query: 727 LISSGMAPDVVTFNTLMNGVCHDILDRAMILTGKMLRMGFVPDLVTTNLLLSNLRKHGLP 548
           LIS+G+ PD VT+NT+MNGVC D+L+RAMI+T K+L+M FVP++VT NLLLS+  K G+P
Sbjct: 630 LISAGVVPDTVTYNTVMNGVCTDVLERAMIVTAKLLKMAFVPNVVTANLLLSHFCKQGMP 689

Query: 547 HRTAMWAQKLMEIPFEFDEITYKILDQVYRDLEEGV 440
            +T MW QKL EI F FDEI+ K++D+ YR++++ V
Sbjct: 690 EKTIMWGQKLNEISFGFDEISIKLMDRAYRNIQDNV 725


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