BLASTX nr result

ID: Scutellaria24_contig00016481 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00016481
         (258 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADI58371.1| pentatricopeptide repeat-containing protein [Caps...    72   5e-11
emb|CBI18867.3| unnamed protein product [Vitis vinifera]               67   2e-09
ref|XP_002284840.1| PREDICTED: pentatricopeptide repeat-containi...    67   2e-09
ref|XP_002889073.1| pentatricopeptide repeat-containing protein ...    60   2e-07
gb|AAF17637.1|AC009978_13 T23E18.21 [Arabidopsis thaliana]             56   3e-06

>gb|ADI58371.1| pentatricopeptide repeat-containing protein [Capsicum annuum]
          Length = 805

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 35/55 (63%), Positives = 43/55 (78%)
 Frame = -1

Query: 258 VLQQDVSAVREIWKECGSYHSLNTITLHKFVLSFTRLGDLAYAYVALQQMVDVAF 94
           VLQQ++SAV EIWKEC  ++SL+ I+L KF+ SFT LGDL  AY ALQ MV +AF
Sbjct: 204 VLQQNLSAVHEIWKECIKFYSLSIISLRKFIWSFTELGDLESAYTALQHMVRLAF 258


>emb|CBI18867.3| unnamed protein product [Vitis vinifera]
          Length = 804

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 32/55 (58%), Positives = 42/55 (76%)
 Frame = -1

Query: 258 VLQQDVSAVREIWKECGSYHSLNTITLHKFVLSFTRLGDLAYAYVALQQMVDVAF 94
           VLQQ++SA  +IWKE  +Y+S++ I+L KF+ SFTRL DL  AY ALQ MVD+ F
Sbjct: 209 VLQQNLSAAHKIWKEYMTYYSMSIISLRKFIWSFTRLRDLESAYAALQHMVDLVF 263


>ref|XP_002284840.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g76280-like [Vitis vinifera]
          Length = 728

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 32/55 (58%), Positives = 42/55 (76%)
 Frame = -1

Query: 258 VLQQDVSAVREIWKECGSYHSLNTITLHKFVLSFTRLGDLAYAYVALQQMVDVAF 94
           VLQQ++SA  +IWKE  +Y+S++ I+L KF+ SFTRL DL  AY ALQ MVD+ F
Sbjct: 173 VLQQNLSAAHKIWKEYMTYYSMSIISLRKFIWSFTRLRDLESAYAALQHMVDLVF 227


>ref|XP_002889073.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297334914|gb|EFH65332.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 800

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 31/64 (48%), Positives = 44/64 (68%), Gaps = 1/64 (1%)
 Frame = -1

Query: 258 VLQQDVSAVREIWKECGSYHSLNTITLHKFVLSFTRLGDLAYAYVALQQMVDVAFHSN-F 82
           +L++++SAV +IWK   +++SL+ + L KF+ SFTRLGDL  AY  LQ MVD+A     F
Sbjct: 208 LLKRNLSAVNDIWKHYVNHYSLDILPLRKFIWSFTRLGDLKSAYELLQHMVDLASRGELF 267

Query: 81  KKEN 70
            K N
Sbjct: 268 VKSN 271


>gb|AAF17637.1|AC009978_13 T23E18.21 [Arabidopsis thaliana]
          Length = 800

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 26/59 (44%), Positives = 40/59 (67%)
 Frame = -1

Query: 258 VLQQDVSAVREIWKECGSYHSLNTITLHKFVLSFTRLGDLAYAYVALQQMVDVAFHSNF 82
           V Q+++S V +IWK   ++++L+ ++L +F+ SFTRLGDL  AY  LQ MV +A    F
Sbjct: 165 VFQRNLSTVNDIWKHYVNHYNLDILSLRRFIWSFTRLGDLKSAYELLQHMVYLALRGEF 223


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