BLASTX nr result

ID: Scutellaria24_contig00016396 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00016396
         (1275 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002323073.1| predicted protein [Populus trichocarpa] gi|2...   178   2e-42
ref|XP_002275084.1| PREDICTED: RING-H2 finger protein ATL72 [Vit...   178   2e-42
ref|XP_003528016.1| PREDICTED: RING-H2 finger protein ATL72-like...   167   5e-39
ref|XP_002271473.1| PREDICTED: RING-H2 finger protein ATL72-like...   166   1e-38
ref|XP_002520866.1| RING-H2 finger protein ATL3C, putative [Rici...   166   1e-38

>ref|XP_002323073.1| predicted protein [Populus trichocarpa] gi|222867703|gb|EEF04834.1|
           predicted protein [Populus trichocarpa]
          Length = 186

 Score =  178 bits (452), Expect = 2e-42
 Identities = 89/171 (52%), Positives = 107/171 (62%), Gaps = 5/171 (2%)
 Frame = -2

Query: 824 LHRRLLHHG--GAPPSNGSRAHSEYSKAANFDTNMVXXXXXXXXXXXXXLGINSIVRCVL 651
           +HRR+L        P+NG+R H  Y    NFDTNMV             LG+NSIVRC+L
Sbjct: 1   MHRRMLDTVPLDVAPANGNRTHDSYINETNFDTNMVIILAALLCALIGALGLNSIVRCLL 60

Query: 650 RCATRMNPAAGADAPPRFGRKGLKKAALRQIPVAVYGAEQGVGFSDCPICLGEFVDGEKI 471
           RC++R       +A  R    GLKK  LRQIPVA+YGA   +  ++CPICLGEFVDGEK+
Sbjct: 61  RCSSRFALETTEEAAARLAATGLKKRDLRQIPVAIYGAGGSISATECPICLGEFVDGEKV 120

Query: 470 RVLPKCHHCFHVKCVDTWLASHSSCPTCRHSLAE---ECGGDAVADGGGRP 327
           RVLPKC+H FHV+C+DTWL SHSSCP CRHSL E   + G      G  RP
Sbjct: 121 RVLPKCNHGFHVRCIDTWLLSHSSCPNCRHSLLEHTTDSGAAQEVTGAARP 171


>ref|XP_002275084.1| PREDICTED: RING-H2 finger protein ATL72 [Vitis vinifera]
           gi|147769463|emb|CAN70348.1| hypothetical protein
           VITISV_012580 [Vitis vinifera]
           gi|297736494|emb|CBI25365.3| unnamed protein product
           [Vitis vinifera]
          Length = 197

 Score =  178 bits (452), Expect = 2e-42
 Identities = 88/152 (57%), Positives = 102/152 (67%), Gaps = 1/152 (0%)
 Frame = -2

Query: 821 HRRLLHHG-GAPPSNGSRAHSEYSKAANFDTNMVXXXXXXXXXXXXXLGINSIVRCVLRC 645
           HR LL    GA P+ GSR  S Y+  ANFDTNMV             LG+NSIVRC LRC
Sbjct: 9   HRLLLDTDPGASPNVGSRMRSSYTNEANFDTNMVIILAALLCALICALGLNSIVRCALRC 68

Query: 644 ATRMNPAAGADAPPRFGRKGLKKAALRQIPVAVYGAEQGVGFSDCPICLGEFVDGEKIRV 465
           + R+      +   R    GLKK+ALRQIPVAVYG+   +  +DCPICLGEF  G+K+RV
Sbjct: 69  SRRLAFETADETAARLAATGLKKSALRQIPVAVYGSGTNIPATDCPICLGEFEQGDKVRV 128

Query: 464 LPKCHHCFHVKCVDTWLASHSSCPTCRHSLAE 369
           LPKCHH FH+KC+DTWL SHSSCPTCRHSL E
Sbjct: 129 LPKCHHGFHMKCIDTWLVSHSSCPTCRHSLLE 160


>ref|XP_003528016.1| PREDICTED: RING-H2 finger protein ATL72-like [Glycine max]
          Length = 198

 Score =  167 bits (423), Expect = 5e-39
 Identities = 90/179 (50%), Positives = 108/179 (60%), Gaps = 8/179 (4%)
 Frame = -2

Query: 830 MKLHRRLL----HHGGAPPSNGSRAHSEYSKAANFDTNMVXXXXXXXXXXXXXLGINSIV 663
           M LH RLL    +     PS+ +R    ++  ANFDTNMV             LG+NSIV
Sbjct: 1   MTLHHRLLLVDTNSSSPAPSSMNRTRETFTGDANFDTNMVIILAALLCALICALGLNSIV 60

Query: 662 RCVLRCATRMNPAAGADAPPRFGRKGLKKAALRQIPVAVYGA-EQGVGFSDCPICLGEFV 486
           RC LRC+ R       +   R   KGLKK+AL QIP+ VYG+    +  +DCPICLGEFV
Sbjct: 61  RCALRCSRRFAFETPEETAARLVAKGLKKSALHQIPIVVYGSGSASIAATDCPICLGEFV 120

Query: 485 DGEKIRVLPKCHHCFHVKCVDTWLASHSSCPTCRHSLAEE---CGGDAVADGGGRPVGS 318
           DGEK+RVLPKC+H FHV+C+DTWL SHSSCP CR SL E     G  AVA G    VG+
Sbjct: 121 DGEKVRVLPKCNHGFHVRCIDTWLLSHSSCPNCRQSLLEHPTISGAVAVAAGTSHHVGN 179


>ref|XP_002271473.1| PREDICTED: RING-H2 finger protein ATL72-like [Vitis vinifera]
          Length = 195

 Score =  166 bits (420), Expect = 1e-38
 Identities = 84/153 (54%), Positives = 98/153 (64%), Gaps = 2/153 (1%)
 Frame = -2

Query: 821 HRRLLHHGGAPP--SNGSRAHSEYSKAANFDTNMVXXXXXXXXXXXXXLGINSIVRCVLR 648
           H RLL     P   SNG+  H  Y    NFDTNMV             LG+NSIVRC +R
Sbjct: 13  HHRLLLDTPEPSTMSNGNSTHEAYVNETNFDTNMVIILAALLCALIGALGLNSIVRCAMR 72

Query: 647 CATRMNPAAGADAPPRFGRKGLKKAALRQIPVAVYGAEQGVGFSDCPICLGEFVDGEKIR 468
           C+ R++P +   A       GLKK ALRQIPVAVYG    +  ++CPICLGEFV GEK+R
Sbjct: 73  CSRRLSPESQGQAAT-----GLKKRALRQIPVAVYGPGVEIPATECPICLGEFVQGEKVR 127

Query: 467 VLPKCHHCFHVKCVDTWLASHSSCPTCRHSLAE 369
           VLPKC+H FHV+C+DTWL SHSSCP CRHSL E
Sbjct: 128 VLPKCNHGFHVRCIDTWLVSHSSCPNCRHSLLE 160


>ref|XP_002520866.1| RING-H2 finger protein ATL3C, putative [Ricinus communis]
           gi|223539997|gb|EEF41575.1| RING-H2 finger protein
           ATL3C, putative [Ricinus communis]
          Length = 208

 Score =  166 bits (420), Expect = 1e-38
 Identities = 88/155 (56%), Positives = 102/155 (65%), Gaps = 3/155 (1%)
 Frame = -2

Query: 821 HRRLLH-HGGAPPSNGSRAHSEYSKAANFDTNMVXXXXXXXXXXXXXLGINSIVRCVLRC 645
           HR LL+     PP NGSR  S Y+  ANFDTNMV             LG+NSIVRC LRC
Sbjct: 12  HRLLLNTESNTPPINGSRIRS-YTNEANFDTNMVIILAALLCALICALGLNSIVRCALRC 70

Query: 644 ATRMNPAAGADAPPRFGRKGLKKAALRQIPVAVYGAEQGVGF--SDCPICLGEFVDGEKI 471
           + R       +A  R    GLKK+ALRQIPV +YGA  G+    +DC ICLGEF DGEK+
Sbjct: 71  SRRFAFETPDEAAARLAATGLKKSALRQIPVVIYGAA-GIQIIATDCAICLGEFSDGEKV 129

Query: 470 RVLPKCHHCFHVKCVDTWLASHSSCPTCRHSLAEE 366
           RVLPKC+H FHV+C+DTWL SHSSCPTCR SL E+
Sbjct: 130 RVLPKCNHGFHVRCIDTWLGSHSSCPTCRQSLLEQ 164


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