BLASTX nr result

ID: Scutellaria24_contig00016267 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00016267
         (427 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002532972.1| RNA-binding protein, putative [Ricinus commu...    96   3e-18
gb|ABI23000.1| putative RNA-binding protein [Ammopiptanthus mong...    86   3e-15
ref|XP_002278861.2| PREDICTED: uncharacterized protein LOC100250...    85   5e-15
ref|XP_003530540.1| PREDICTED: uncharacterized protein LOC100787...    85   5e-15
emb|CBI33920.3| unnamed protein product [Vitis vinifera]               85   5e-15

>ref|XP_002532972.1| RNA-binding protein, putative [Ricinus communis]
            gi|223527250|gb|EEF29409.1| RNA-binding protein, putative
            [Ricinus communis]
          Length = 962

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 65/142 (45%), Positives = 73/142 (51%), Gaps = 1/142 (0%)
 Frame = +1

Query: 1    VKSDTVYMGQGDXXXXXXXXXXXXXXLLKLTESSTVTPFRTDASALGSYVXXXXXXXXXX 180
            VKSDT + G G               L     S+ VTPFRTDASA               
Sbjct: 731  VKSDTSFSGSG---RGVSTSIAMSGSLTNADTSAVVTPFRTDASA--------------- 772

Query: 181  XXTSSCWKW*KKVL*DASALGSYVPPQAAGSGKRRFSEMP-SASVGNREQSQTIYRDRAA 357
                               LGSY P  +AGSGKRRFSEMP S++  N+EQSQT+YRDRAA
Sbjct: 773  -------------------LGSYAPCMSAGSGKRRFSEMPLSSASANKEQSQTMYRDRAA 813

Query: 358  ERRSLYGSSSSLEDDLNAAAGD 423
            ERRSLYGSSSS+ DDL    GD
Sbjct: 814  ERRSLYGSSSSVGDDLLDIGGD 835


>gb|ABI23000.1| putative RNA-binding protein [Ammopiptanthus mongolicus]
          Length = 264

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 45/68 (66%), Positives = 55/68 (80%), Gaps = 1/68 (1%)
 Frame = +1

Query: 226 DASALGSYVPPQAAGSGKRRFSEMPSASVGNREQSQTIYRDRAAERRSLYGSSSSLEDDL 405
           D SALGS++P  AAGSG+RRFSEMP ++  ++EQ QT YRDRAAERRSLYGSSSS+ +DL
Sbjct: 76  DVSALGSHIPYVAAGSGRRRFSEMPHSASTHKEQPQTTYRDRAAERRSLYGSSSSVGNDL 135

Query: 406 -NAAAGDS 426
            +   GDS
Sbjct: 136 TDLEIGDS 143


>ref|XP_002278861.2| PREDICTED: uncharacterized protein LOC100250662 [Vitis vinifera]
          Length = 1105

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 48/69 (69%), Positives = 51/69 (73%), Gaps = 2/69 (2%)
 Frame = +1

Query: 226  DASALGSYVPPQAAGSGKRRFSEMP-SASVGNREQSQTIYRDRAAERRSLYGSSSSLEDD 402
            DASALGSY PP AAGSGKRRFSEMP   +   +EQ  T YRDRAAERRSLYGSSSS  D 
Sbjct: 914  DASALGSYTPPVAAGSGKRRFSEMPVQLASTQKEQPHTTYRDRAAERRSLYGSSSSTGDS 973

Query: 403  L-NAAAGDS 426
            L +   GDS
Sbjct: 974  LSDLGIGDS 982


>ref|XP_003530540.1| PREDICTED: uncharacterized protein LOC100787998 [Glycine max]
          Length = 1057

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 44/68 (64%), Positives = 52/68 (76%), Gaps = 1/68 (1%)
 Frame = +1

Query: 226  DASALGSYVPPQAAGSGKRRFSEMPSASVGNREQSQTIYRDRAAERRSLYGSSSSLEDDL 405
            D SALGSY P    GSG+RRFSEMP ++  ++EQ QT YRDRAAERRSLYGSSSS+ +DL
Sbjct: 869  DVSALGSYTPSATVGSGRRRFSEMPQSASTHKEQPQTTYRDRAAERRSLYGSSSSVGNDL 928

Query: 406  -NAAAGDS 426
             +   GDS
Sbjct: 929  ADLEIGDS 936


>emb|CBI33920.3| unnamed protein product [Vitis vinifera]
          Length = 1029

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 48/69 (69%), Positives = 51/69 (73%), Gaps = 2/69 (2%)
 Frame = +1

Query: 226  DASALGSYVPPQAAGSGKRRFSEMP-SASVGNREQSQTIYRDRAAERRSLYGSSSSLEDD 402
            DASALGSY PP AAGSGKRRFSEMP   +   +EQ  T YRDRAAERRSLYGSSSS  D 
Sbjct: 838  DASALGSYTPPVAAGSGKRRFSEMPVQLASTQKEQPHTTYRDRAAERRSLYGSSSSTGDS 897

Query: 403  L-NAAAGDS 426
            L +   GDS
Sbjct: 898  LSDLGIGDS 906


Top