BLASTX nr result

ID: Scutellaria24_contig00016183 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00016183
         (670 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269066.2| PREDICTED: pentatricopeptide repeat-containi...   154   1e-35
emb|CBI17752.3| unnamed protein product [Vitis vinifera]              154   1e-35
ref|XP_003555182.1| PREDICTED: pentatricopeptide repeat-containi...   152   6e-35
ref|XP_003598903.1| Pentatricopeptide repeat-containing protein ...   149   6e-34
ref|XP_002513116.1| pentatricopeptide repeat-containing protein,...   146   3e-33

>ref|XP_002269066.2| PREDICTED: pentatricopeptide repeat-containing protein At4g20740-like
            [Vitis vinifera]
          Length = 1294

 Score =  154 bits (390), Expect = 1e-35
 Identities = 70/107 (65%), Positives = 92/107 (85%)
 Frame = -3

Query: 668  IIHVCKLNDATKVVEVLNEMVEEGCSPKSVTYAAIIYGMCKYGTIEEARKVFSLLRESKF 489
            I+H CK  +A KV++VLNEM++EGC+P  VTY+A+I GMCK+GT+EEARKVFS +RE K 
Sbjct: 1118 ILHACKSGNAEKVIDVLNEMMQEGCTPDEVTYSALISGMCKHGTLEEARKVFSNMRERKL 1177

Query: 488  LSEADIIIHDDMLVNHMKKTTADLVLSGIKFFGLESKLKRKGCTFLP 348
            L+EA++I++D++L+ HMKK TADLVLSG+KFFGLESKL+ KG T LP
Sbjct: 1178 LTEANVIVYDEILIEHMKKKTADLVLSGLKFFGLESKLRSKGSTLLP 1224


>emb|CBI17752.3| unnamed protein product [Vitis vinifera]
          Length = 729

 Score =  154 bits (390), Expect = 1e-35
 Identities = 70/107 (65%), Positives = 92/107 (85%)
 Frame = -3

Query: 668 IIHVCKLNDATKVVEVLNEMVEEGCSPKSVTYAAIIYGMCKYGTIEEARKVFSLLRESKF 489
           I+H CK  +A KV++VLNEM++EGC+P  VTY+A+I GMCK+GT+EEARKVFS +RE K 
Sbjct: 614 ILHACKSGNAEKVIDVLNEMMQEGCTPDEVTYSALISGMCKHGTLEEARKVFSNMRERKL 673

Query: 488 LSEADIIIHDDMLVNHMKKTTADLVLSGIKFFGLESKLKRKGCTFLP 348
           L+EA++I++D++L+ HMKK TADLVLSG+KFFGLESKL+ KG T LP
Sbjct: 674 LTEANVIVYDEILIEHMKKKTADLVLSGLKFFGLESKLRSKGSTLLP 720


>ref|XP_003555182.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20740-like [Glycine max]
          Length = 733

 Score =  152 bits (384), Expect = 6e-35
 Identities = 72/108 (66%), Positives = 90/108 (83%)
 Frame = -3

Query: 668 IIHVCKLNDATKVVEVLNEMVEEGCSPKSVTYAAIIYGMCKYGTIEEARKVFSLLRESKF 489
           IIH CK N A KV++VLNEM+E+GCS  +V Y +II GMCK+GTIEEARKVFS LRE  F
Sbjct: 626 IIHACKSNVAEKVIDVLNEMIEQGCSLDNVIYCSIISGMCKHGTIEEARKVFSNLRERNF 685

Query: 488 LSEADIIIHDDMLVNHMKKTTADLVLSGIKFFGLESKLKRKGCTFLPT 345
           L+E++ I++D++L++HMKK TADLVLS +KFFGLESKLK KGC  LP+
Sbjct: 686 LTESNTIVYDELLIDHMKKKTADLVLSSLKFFGLESKLKAKGCKLLPS 733


>ref|XP_003598903.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355487951|gb|AES69154.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 767

 Score =  149 bits (375), Expect = 6e-34
 Identities = 70/103 (67%), Positives = 89/103 (86%)
 Frame = -3

Query: 668 IIHVCKLNDATKVVEVLNEMVEEGCSPKSVTYAAIIYGMCKYGTIEEARKVFSLLRESKF 489
           II +CK N A K+++VLNEM++EGCS  +V  +AII GMCKYGTIEEARKVFS+LRE K 
Sbjct: 616 IIRMCKSNVAEKLIDVLNEMMQEGCSLDNVVCSAIISGMCKYGTIEEARKVFSILRERKL 675

Query: 488 LSEADIIIHDDMLVNHMKKTTADLVLSGIKFFGLESKLKRKGC 360
           L+E+D I++D++L++HMKK TADLV+SG+KFFGLESKLK KGC
Sbjct: 676 LTESDTIVYDELLIDHMKKKTADLVISGLKFFGLESKLKSKGC 718


>ref|XP_002513116.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223548127|gb|EEF49619.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 1128

 Score =  146 bits (369), Expect = 3e-33
 Identities = 69/108 (63%), Positives = 85/108 (78%)
 Frame = -3

Query: 668  IIHVCKLNDATKVVEVLNEMVEEGCSPKSVTYAAIIYGMCKYGTIEEARKVFSLLRESKF 489
            ++HVC+  DA KV+EVLNEM+ E C P  V  +AII GMCK+GT+EEARKVF+ LRE K 
Sbjct: 1021 VLHVCRSGDAEKVIEVLNEMMHENCPPNEVILSAIISGMCKHGTLEEARKVFTNLRERKL 1080

Query: 488  LSEADIIIHDDMLVNHMKKTTADLVLSGIKFFGLESKLKRKGCTFLPT 345
            L+EA  I +D+ L+ HMKK TADLV+SG+KFFGLESKL+ KGCT L T
Sbjct: 1081 LTEAKTIFYDERLIEHMKKKTADLVVSGLKFFGLESKLRAKGCTLLST 1128


Top