BLASTX nr result

ID: Scutellaria24_contig00016130 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00016130
         (742 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAD36023.1| transcription factor R18 [Craterostigma plantagi...    61   3e-07

>emb|CAD36023.1| transcription factor R18 [Craterostigma plantagineum]
          Length = 434

 Score = 60.8 bits (146), Expect = 3e-07
 Identities = 49/187 (26%), Positives = 82/187 (43%), Gaps = 16/187 (8%)
 Frame = -3

Query: 653 RATRNEQVKGKQVDEKREHLHCHT-TTSESNIPIQSVSLHGKPSDTSNADVVPIHQRLMS 477
           R  R+ +++ +++ +K  +   +  T  ++N PI S +   + S +         + L++
Sbjct: 260 RCHRDARIERREMRKKAINAEANRGTRKQNNGPIHSTNHEKRISGSVK------QKDLIT 313

Query: 476 MSMDCSYQKGHSTASQLPSVYSSKSSTQHVNYHCARSPIRGHPPSFFPNSNHVK------ 315
              D S+   H      P    S S  Q  +Y   R P  G P +  P    +       
Sbjct: 314 DLDDTSF---HHKKQNYPGASGSNSGNQGNHY---RPPPIGIPSTILPPFVRINSCGFDR 367

Query: 314 ---------IPVQQPAFKENWVRPYSQQSHLQNENAARNPPVQQQKCKYFVQGRCYFGDR 162
                    I + +  F  + V P  Q+ H+Q+ +  RN     Q C+Y+ QGRC+FGDR
Sbjct: 368 SFQPTSLSNINMSRTNFLHHLVHPRDQRQHVQSRDYVRN-----QICRYYAQGRCHFGDR 422

Query: 161 CKYLHEV 141
           CKYLHE+
Sbjct: 423 CKYLHEL 429


Top