BLASTX nr result
ID: Scutellaria24_contig00016068
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Scutellaria24_contig00016068
(820 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003589418.1| Polyadenylate-binding protein [Medicago trun... 118 7e-42
gb|AFK40282.1| unknown [Medicago truncatula] 118 9e-42
ref|XP_002513659.1| conserved hypothetical protein [Ricinus comm... 121 3e-41
ref|XP_003549030.1| PREDICTED: probable RNA-binding protein 18-l... 120 8e-41
ref|XP_003636251.1| Polyadenylate-binding protein [Medicago trun... 114 2e-40
>ref|XP_003589418.1| Polyadenylate-binding protein [Medicago truncatula]
gi|357473041|ref|XP_003606805.1| Polyadenylate-binding
protein [Medicago truncatula]
gi|355478466|gb|AES59669.1| Polyadenylate-binding
protein [Medicago truncatula]
gi|355507860|gb|AES89002.1| Polyadenylate-binding
protein [Medicago truncatula]
Length = 157
Score = 118 bits (296), Expect(2) = 7e-42
Identities = 53/68 (77%), Positives = 63/68 (92%)
Frame = -2
Query: 648 MDPNNNNDEKLESRLYIGNLDLRITEAALIKMFSPFGKIVSEDFLWHTRGPKRGEPRGYA 469
MD N + D+K E+RLY+GNLDLRITEA L+KMFSP+GKI+SEDFLWHTRGPKRGEPRG+A
Sbjct: 1 MDLNGSVDDKCENRLYVGNLDLRITEATLLKMFSPYGKIMSEDFLWHTRGPKRGEPRGFA 60
Query: 468 FIQFSSKE 445
FIQ+S+KE
Sbjct: 61 FIQYSTKE 68
Score = 79.0 bits (193), Expect(2) = 7e-42
Identities = 44/89 (49%), Positives = 57/89 (64%)
Frame = -1
Query: 436 QEAIRAKEKMHGRMACGRPLVVRLASEKYPMEGLANSSKSVEVSRPGLSAGGGCGQTSRS 257
+EAI AKEKMHGR+AC RPLVVRLA E+Y +E +S+K+V GGG GQTSRS
Sbjct: 68 EEAILAKEKMHGRLACSRPLVVRLAGERYALEKADSSTKAVSEGHKLHLTGGGIGQTSRS 127
Query: 256 XXXXXXXXXXXXIDEESHKTSKKQKQTDH 170
++E++ KT KKQK +D+
Sbjct: 128 AKIAAIKNKLKSLEEDNSKT-KKQKLSDN 155
>gb|AFK40282.1| unknown [Medicago truncatula]
Length = 157
Score = 118 bits (296), Expect(2) = 9e-42
Identities = 53/68 (77%), Positives = 63/68 (92%)
Frame = -2
Query: 648 MDPNNNNDEKLESRLYIGNLDLRITEAALIKMFSPFGKIVSEDFLWHTRGPKRGEPRGYA 469
MD N + D+K E+RLY+GNLDLRITEA L+KMFSP+GKI+SEDFLWHTRGPKRGEPRG+A
Sbjct: 1 MDLNGSVDDKCENRLYVGNLDLRITEATLLKMFSPYGKIMSEDFLWHTRGPKRGEPRGFA 60
Query: 468 FIQFSSKE 445
FIQ+S+KE
Sbjct: 61 FIQYSTKE 68
Score = 78.6 bits (192), Expect(2) = 9e-42
Identities = 43/89 (48%), Positives = 57/89 (64%)
Frame = -1
Query: 436 QEAIRAKEKMHGRMACGRPLVVRLASEKYPMEGLANSSKSVEVSRPGLSAGGGCGQTSRS 257
+EAI AKEKMHGR+AC RPLV+RLA E+Y +E +S+K+V GGG GQTSRS
Sbjct: 68 EEAILAKEKMHGRLACSRPLVIRLAGERYALEKADSSTKAVSEGHKLHLTGGGIGQTSRS 127
Query: 256 XXXXXXXXXXXXIDEESHKTSKKQKQTDH 170
++E++ KT KKQK +D+
Sbjct: 128 AKIAAIKNKLKSLEEDNSKT-KKQKLSDN 155
>ref|XP_002513659.1| conserved hypothetical protein [Ricinus communis]
gi|223547567|gb|EEF49062.1| conserved hypothetical
protein [Ricinus communis]
Length = 170
Score = 121 bits (304), Expect(2) = 3e-41
Identities = 56/69 (81%), Positives = 63/69 (91%)
Frame = -2
Query: 651 IMDPNNNNDEKLESRLYIGNLDLRITEAALIKMFSPFGKIVSEDFLWHTRGPKRGEPRGY 472
+ D N DEK ES+LY+GNLDLRITEAALIKMFSP+GKIVSEDFLWHTRGPKRGEPRG+
Sbjct: 1 MQDSNGFIDEKAESKLYVGNLDLRITEAALIKMFSPYGKIVSEDFLWHTRGPKRGEPRGF 60
Query: 471 AFIQFSSKE 445
AF+QFS+KE
Sbjct: 61 AFVQFSTKE 69
Score = 73.9 bits (180), Expect(2) = 3e-41
Identities = 43/87 (49%), Positives = 54/87 (62%)
Frame = -1
Query: 436 QEAIRAKEKMHGRMACGRPLVVRLASEKYPMEGLANSSKSVEVSRPGLSAGGGCGQTSRS 257
+EA AKEKMHGR+ACGRPLVVRLASEKY E NS ++V + +AGG GQ SR+
Sbjct: 69 EEAELAKEKMHGRLACGRPLVVRLASEKYLEEAAQNSCRAVGEMKKTSTAGGTSGQMSRN 128
Query: 256 XXXXXXXXXXXXIDEESHKTSKKQKQT 176
++EE + KKQKQ+
Sbjct: 129 AKIAAIKNKLRTLEEEG-SSVKKQKQS 154
>ref|XP_003549030.1| PREDICTED: probable RNA-binding protein 18-like [Glycine max]
Length = 212
Score = 120 bits (301), Expect(2) = 8e-41
Identities = 56/69 (81%), Positives = 65/69 (94%)
Frame = -2
Query: 651 IMDPNNNNDEKLESRLYIGNLDLRITEAALIKMFSPFGKIVSEDFLWHTRGPKRGEPRGY 472
+MDPN D++ ESRLYIGNLDLRITEAAL+KMFSP+GKI+SEDFLWHTRGPKRGEPRG+
Sbjct: 56 VMDPN---DDRGESRLYIGNLDLRITEAALLKMFSPYGKIISEDFLWHTRGPKRGEPRGF 112
Query: 471 AFIQFSSKE 445
AFIQ+S+KE
Sbjct: 113 AFIQYSTKE 121
Score = 73.6 bits (179), Expect(2) = 8e-41
Identities = 45/91 (49%), Positives = 59/91 (64%), Gaps = 2/91 (2%)
Frame = -1
Query: 436 QEAIRAKEKMHGRMACGRPLVVRLASEKYPMEGLANSSKSV-EVSRPGLSAGGGC-GQTS 263
+EA AKEKMHGR+ACGRPL VRLA EK+ +E NS+K+ E + L+ GGG GQTS
Sbjct: 121 EEAELAKEKMHGRLACGRPLFVRLAGEKFMLETADNSTKAAGEGHKMHLTGGGGAMGQTS 180
Query: 262 RSXXXXXXXXXXXXIDEESHKTSKKQKQTDH 170
R ++EES + SKKQK++D+
Sbjct: 181 RHAKIAAIKNKLKSLEEESSR-SKKQKRSDN 210
>ref|XP_003636251.1| Polyadenylate-binding protein [Medicago truncatula]
gi|355502186|gb|AES83389.1| Polyadenylate-binding
protein [Medicago truncatula]
Length = 157
Score = 114 bits (286), Expect(2) = 2e-40
Identities = 52/68 (76%), Positives = 61/68 (89%)
Frame = -2
Query: 648 MDPNNNNDEKLESRLYIGNLDLRITEAALIKMFSPFGKIVSEDFLWHTRGPKRGEPRGYA 469
MDPN + D+K E+RL +GNLDLRITEAAL+KMFSP+GKIVS D LWHTRGPKRGEPRG+A
Sbjct: 1 MDPNGSVDDKCENRLCVGNLDLRITEAALLKMFSPYGKIVSVDLLWHTRGPKRGEPRGFA 60
Query: 468 FIQFSSKE 445
FI +S+KE
Sbjct: 61 FIHYSTKE 68
Score = 77.8 bits (190), Expect(2) = 2e-40
Identities = 43/89 (48%), Positives = 57/89 (64%)
Frame = -1
Query: 436 QEAIRAKEKMHGRMACGRPLVVRLASEKYPMEGLANSSKSVEVSRPGLSAGGGCGQTSRS 257
+EAI A+EKMHGR+AC RPLVVRLA E+Y +E +S+K+V GGG GQTSRS
Sbjct: 68 EEAILAREKMHGRLACSRPLVVRLAGERYALEKADSSTKAVSEGHKLHLTGGGIGQTSRS 127
Query: 256 XXXXXXXXXXXXIDEESHKTSKKQKQTDH 170
++E++ KT KKQK +D+
Sbjct: 128 AKIAAIKNKLKSLEEDNSKT-KKQKLSDN 155