BLASTX nr result

ID: Scutellaria24_contig00016038 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00016038
         (487 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI19389.3| unnamed protein product [Vitis vinifera]              146   1e-33
ref|XP_002283378.1| PREDICTED: pentatricopeptide repeat-containi...   146   1e-33
ref|XP_002301807.1| predicted protein [Populus trichocarpa] gi|2...   146   2e-33
ref|XP_002534359.1| pentatricopeptide repeat-containing protein,...   144   1e-32
ref|XP_002883590.1| hypothetical protein ARALYDRAFT_899142 [Arab...   140   1e-31

>emb|CBI19389.3| unnamed protein product [Vitis vinifera]
          Length = 365

 Score =  146 bits (369), Expect = 1e-33
 Identities = 69/93 (74%), Positives = 81/93 (87%)
 Frame = +3

Query: 201 PKPPNLRTRTPLEKQFETWLQNLKPGFTQSDVDEALLAQTDPDVALDIFRWTAQQRHYKH 380
           P+ PN +T TPL+ QFE+W+  LKPGF+ SDVDEAL AQ+DPD+ALDIFRWT QQR Y+H
Sbjct: 61  PQSPNPKTPTPLQMQFESWIHMLKPGFSPSDVDEALRAQSDPDLALDIFRWTGQQRGYRH 120

Query: 381 SHVTYLRMIEIAVSGKRYRVAETLIEEVIAGAC 479
           +HVTYL MI+IAVSGKR+R AETLIEEVIAGAC
Sbjct: 121 NHVTYLTMIKIAVSGKRFRHAETLIEEVIAGAC 153


>ref|XP_002283378.1| PREDICTED: pentatricopeptide repeat-containing protein At3g25210,
           mitochondrial-like [Vitis vinifera]
          Length = 393

 Score =  146 bits (369), Expect = 1e-33
 Identities = 69/93 (74%), Positives = 81/93 (87%)
 Frame = +3

Query: 201 PKPPNLRTRTPLEKQFETWLQNLKPGFTQSDVDEALLAQTDPDVALDIFRWTAQQRHYKH 380
           P+ PN +T TPL+ QFE+W+  LKPGF+ SDVDEAL AQ+DPD+ALDIFRWT QQR Y+H
Sbjct: 61  PQSPNPKTPTPLQMQFESWIHMLKPGFSPSDVDEALRAQSDPDLALDIFRWTGQQRGYRH 120

Query: 381 SHVTYLRMIEIAVSGKRYRVAETLIEEVIAGAC 479
           +HVTYL MI+IAVSGKR+R AETLIEEVIAGAC
Sbjct: 121 NHVTYLTMIKIAVSGKRFRHAETLIEEVIAGAC 153


>ref|XP_002301807.1| predicted protein [Populus trichocarpa] gi|222843533|gb|EEE81080.1|
           predicted protein [Populus trichocarpa]
          Length = 325

 Score =  146 bits (368), Expect = 2e-33
 Identities = 67/86 (77%), Positives = 78/86 (90%)
 Frame = +3

Query: 222 TRTPLEKQFETWLQNLKPGFTQSDVDEALLAQTDPDVALDIFRWTAQQRHYKHSHVTYLR 401
           TRTPLE QFETW QNLKPGFT +DVD A+ AQ+DPD+ALDIFRWTAQQR+YKH+H+TYL 
Sbjct: 1   TRTPLETQFETWTQNLKPGFTPTDVDTAIRAQSDPDLALDIFRWTAQQRNYKHNHITYLT 60

Query: 402 MIEIAVSGKRYRVAETLIEEVIAGAC 479
           +I+I +SG+RYR AETLIEEVIAGAC
Sbjct: 61  VIKILISGRRYRQAETLIEEVIAGAC 86


>ref|XP_002534359.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223525434|gb|EEF28024.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 382

 Score =  144 bits (362), Expect = 1e-32
 Identities = 69/95 (72%), Positives = 78/95 (82%), Gaps = 1/95 (1%)
 Frame = +3

Query: 198 LPKPP-NLRTRTPLEKQFETWLQNLKPGFTQSDVDEALLAQTDPDVALDIFRWTAQQRHY 374
           LP PP   RTRTPLE QFETW Q LKPGFT +DV  AL +Q+DPD+A DIFRWTAQQR+Y
Sbjct: 48  LPIPPVRTRTRTPLETQFETWTQTLKPGFTPTDVQTALRSQSDPDLAYDIFRWTAQQRNY 107

Query: 375 KHSHVTYLRMIEIAVSGKRYRVAETLIEEVIAGAC 479
           KHSH+TY  MI+I + GKRYR AETL+EEVIAGAC
Sbjct: 108 KHSHLTYFAMIKILIDGKRYRHAETLVEEVIAGAC 142


>ref|XP_002883590.1| hypothetical protein ARALYDRAFT_899142 [Arabidopsis lyrata subsp.
           lyrata] gi|297329430|gb|EFH59849.1| hypothetical protein
           ARALYDRAFT_899142 [Arabidopsis lyrata subsp. lyrata]
          Length = 379

 Score =  140 bits (353), Expect = 1e-31
 Identities = 66/91 (72%), Positives = 76/91 (83%)
 Frame = +3

Query: 207 PPNLRTRTPLEKQFETWLQNLKPGFTQSDVDEALLAQTDPDVALDIFRWTAQQRHYKHSH 386
           PP +RTRTPLE QFETW+QNLKPGFT SDV  AL AQ+DPD+ALDIFRWT+QQR YKH+H
Sbjct: 49  PPRIRTRTPLETQFETWIQNLKPGFTNSDVVTALRAQSDPDLALDIFRWTSQQRGYKHNH 108

Query: 387 VTYLRMIEIAVSGKRYRVAETLIEEVIAGAC 479
             Y  MI+ A++GKR +  ETLIEEVIAGAC
Sbjct: 109 EAYHTMIKQAITGKRNKFVETLIEEVIAGAC 139


Top