BLASTX nr result
ID: Scutellaria24_contig00016022
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Scutellaria24_contig00016022
(912 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002264123.1| PREDICTED: putative pentatricopeptide repeat... 89 8e-32
ref|XP_003595326.1| Pentatricopeptide repeat-containing protein ... 78 1e-27
gb|AEP33770.1| organelle transcript processing 82, partial [Raph... 83 1e-27
ref|XP_002327523.1| predicted protein [Populus trichocarpa] gi|2... 77 2e-27
ref|XP_002283562.1| PREDICTED: pentatricopeptide repeat-containi... 124 3e-26
>ref|XP_002264123.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15930 [Vitis vinifera]
Length = 724
Score = 89.0 bits (219), Expect(2) = 8e-32
Identities = 65/179 (36%), Positives = 90/179 (50%), Gaps = 14/179 (7%)
Frame = +2
Query: 110 LEPKLKHVCCLVDPLGRAGLVKEAQERILTMPLKPYTVLWRSLLGAARVHGDLEVVKLHR 289
+EP + H C+VD LGRAG +KEA E I MP+KP +++W SLLGA RVH D E+ ++
Sbjct: 485 IEPNVAHYGCMVDLLGRAGHLKEAHEVIKNMPVKPNSIVWGSLLGACRVHRDEEMAEMA- 543
Query: 290 GN**R*SQRLVGI--------TCFCQI---CTRV*IDWE---DAKSKAVDER*WG*KNVG 427
+Q+++ + C I C R WE + + +D K G
Sbjct: 544 ------AQQILELEPENGAVYVLLCNIYAACNR----WEKLHEVRKLMMDRGIK--KTPG 591
Query: 428 XXXXXXXXXCDA*VSDV*YHPRLKDIYLKVDEMNVKLQEYGYRARTREVLFDIEEEEKE 604
V+ HP+ K+IY K+DEM+V L+ GY T EV DI EEEKE
Sbjct: 592 CSLIEMNGSVHEFVAGDQVHPQSKEIYSKLDEMSVDLKFAGYSPDTSEVFLDIGEEEKE 650
Score = 75.1 bits (183), Expect(2) = 8e-32
Identities = 37/68 (54%), Positives = 51/68 (75%), Gaps = 3/68 (4%)
Frame = +1
Query: 604 RLAIAFVLIATDFGISIRVIKNLRVCVDCHYINELLSEIYKREIIVRDRIGFITFTLVH- 780
+LAIAF LI++ G++IR++KNLR+CVDCHY+ +L+S++Y RE+IVRDR F F H
Sbjct: 659 KLAIAFGLISSGPGVTIRIVKNLRMCVDCHYVAKLVSKVYNREVIVRDRTRFHHFR--HG 716
Query: 781 --SFMDYW 798
S DYW
Sbjct: 717 SCSCKDYW 724
>ref|XP_003595326.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355484374|gb|AES65577.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 740
Score = 78.2 bits (191), Expect(2) = 1e-27
Identities = 36/55 (65%), Positives = 45/55 (81%)
Frame = +2
Query: 110 LEPKLKHVCCLVDPLGRAGLVKEAQERILTMPLKPYTVLWRSLLGAARVHGDLEV 274
+EPKL+H CL+D LGRAG +KEA+E + MP+KP VLWRSLLGAAR+HG+L V
Sbjct: 501 VEPKLEHYGCLIDLLGRAGRLKEAEEWLADMPMKPNAVLWRSLLGAARIHGNLGV 555
Score = 71.6 bits (174), Expect(2) = 1e-27
Identities = 66/198 (33%), Positives = 83/198 (41%), Gaps = 23/198 (11%)
Frame = +1
Query: 274 GEVASR*LVEIEPETSGDYVLLSNMYSCMNRLGRCKE*GS**KIMGXXXXXXXXXXXXXX 453
GEVA L+E+EPETSG+YVLLSNMY+ + R+ K K G
Sbjct: 556 GEVALTKLIELEPETSGNYVLLSNMYASVGRVNDVKRVRKLMKHHGVNKLP--------- 606
Query: 454 XXXMSF*CVISSSSQRHIFEGRRDEREVARIWLSCQN*RSVV*H*G-------------- 591
F V + G R I+L S + G
Sbjct: 607 ----GFSLVEIKGAMHEFLTGDRSHPFSKEIYLKIAEINSRLEEYGHKARTSEALFDLEE 662
Query: 592 -GGEGRLAIAFVLIATDFGI-------SIRVIKNLRVCVDCHYINELLSEIYKREIIVRD 747
EG L+ +A F + +IR+IKNLRVC DCH +L+S Y REIIVRD
Sbjct: 663 EDKEGVLSYHSERLAIAFALIASPSSLAIRIIKNLRVCGDCHAFTKLISVAYHREIIVRD 722
Query: 748 RIGFITFTLVH-SFMDYW 798
R F F S +DYW
Sbjct: 723 RNRFHHFKDGSCSCLDYW 740
>gb|AEP33770.1| organelle transcript processing 82, partial [Raphanus sativus]
Length = 675
Score = 83.2 bits (204), Expect(2) = 1e-27
Identities = 60/180 (33%), Positives = 91/180 (50%), Gaps = 1/180 (0%)
Frame = +2
Query: 68 IGKRRAQTF*VDG*LEPKLKHVCCLVDPLGRAGLVKEAQERILTMPLKPYTVLWRSLLGA 247
+G++ ++ D L PKL+H C++D LG +GL KEA+E I TMP++P V+W SLL A
Sbjct: 422 LGRQIFKSMTQDYNLTPKLEHYGCMIDLLGHSGLFKEAEEMIHTMPMEPDGVIWCSLLKA 481
Query: 248 ARVHGDLEVVKLHRGN**R*SQRLVGITCFCQICTRV*IDWED-AKSKAVDER*WG*KNV 424
+ HG+LE+ + + G WED A+ + V K
Sbjct: 482 CKKHGNLELAESFAQKLIKIEPENSGSYVLLSNIYATAGRWEDVARVRGVLNGKGMKKVP 541
Query: 425 GXXXXXXXXXCDA*VSDV*YHPRLKDIYLKVDEMNVKLQEYGYRARTREVLFDIEEEEKE 604
G + HPR ++IY ++EM+V+L+E G+ T EVL ++EEE KE
Sbjct: 542 GCSSIEVDSVVHEFIIGDKLHPRRREIYHMLEEMDVQLEEAGFAPDTSEVLQEMEEEWKE 601
Score = 66.6 bits (161), Expect(2) = 1e-27
Identities = 35/66 (53%), Positives = 45/66 (68%), Gaps = 1/66 (1%)
Frame = +1
Query: 604 RLAIAFVLIATDFGISIRVIKNLRVCVDCHYINELLSEIYKREIIVRDRIGFITF-TLVH 780
+LAIAF LI+T G + ++KNLRVC +CH +L+S+IYKREI+ RDR F F V
Sbjct: 610 KLAIAFGLISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIVARDRTRFHHFRDGVC 669
Query: 781 SFMDYW 798
S DYW
Sbjct: 670 SCCDYW 675
>ref|XP_002327523.1| predicted protein [Populus trichocarpa] gi|222836077|gb|EEE74498.1|
predicted protein [Populus trichocarpa]
Length = 635
Score = 77.0 bits (188), Expect(3) = 2e-27
Identities = 56/176 (31%), Positives = 84/176 (47%), Gaps = 10/176 (5%)
Frame = +2
Query: 110 LEPKLKHVCCLVDPLGRAGLVKEAQERILTMPLKPYTVLWRSLLGAARVHGDLE------ 271
+EP + H C+VD LG+AG +KEA E I MP+KP +++W +LLGA R+H D E
Sbjct: 396 IEPNIAHYGCMVDLLGKAGHLKEAHEIIKNMPMKPNSIVWGALLGACRIHKDAEMAERAI 455
Query: 272 --VVKLHRGN**R*SQRLVGITC-FCQICTRV*IDWEDAKSKAVDER*WG*KNV-GXXXX 439
+++L N + + C C + W+ + G K G
Sbjct: 456 EQILELEPNN-----GAVYVLQCNIYAACNK----WDKLRELRQVMMDRGIKKTPGCSLI 506
Query: 440 XXXXXCDA*VSDV*YHPRLKDIYLKVDEMNVKLQEYGYRARTREVLFDIEEEEKED 607
V+ HP+ K+IY K+++M L+ GY T EV DI EE+KE+
Sbjct: 507 EMNGIVHEFVAGDQSHPQTKEIYGKLNKMTSDLKIAGYSPNTSEVFLDIAEEDKEN 562
Score = 71.2 bits (173), Expect(3) = 2e-27
Identities = 35/68 (51%), Positives = 50/68 (73%), Gaps = 3/68 (4%)
Frame = +1
Query: 604 RLAIAFVLIATDFGISIRVIKNLRVCVDCHYINELLSEIYKREIIVRDRIGFITFTLVH- 780
+LAIAF LI + G++IR++KNLR+C+DCH++ +L+S++Y RE+IVRDR F F H
Sbjct: 570 KLAIAFGLINSGPGVTIRIVKNLRMCIDCHHVAKLVSKVYDREVIVRDRTRFHHFR--HG 627
Query: 781 --SFMDYW 798
S DYW
Sbjct: 628 SCSCKDYW 635
Score = 21.6 bits (44), Expect(3) = 2e-27
Identities = 8/13 (61%), Positives = 11/13 (84%)
Frame = +3
Query: 66 GLVNEGRKHFESM 104
G+V+EG+K F SM
Sbjct: 378 GMVDEGKKFFASM 390
>ref|XP_002283562.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g43790-like [Vitis vinifera]
Length = 590
Score = 124 bits (310), Expect(2) = 3e-26
Identities = 79/183 (43%), Positives = 106/183 (57%), Gaps = 1/183 (0%)
Frame = +2
Query: 110 LEPKLKHVCCLVDPLGRAGLVKEAQERILTMPLKPYTVLWRSLLGAARVHGDLEVVKLHR 289
+EPKL+H CLVD LGRAG ++EA+ER+L MP+KP V+WRSLLGAARVHG+LE+ ++
Sbjct: 351 VEPKLEHYGCLVDLLGRAGRLREAEERVLNMPMKPNAVIWRSLLGAARVHGNLEIGEVVL 410
Query: 290 GN**R*SQRLVGITCFCQICTRV*IDWEDAKSKAVDER*WG*KNV-GXXXXXXXXXCDA* 466
+ + G W+D K + G V G
Sbjct: 411 KHLIQLEPETSGNYVLLSNMYASINRWDDVKRVRKLMKDHGINKVPGSSLVEVGGAMHEF 470
Query: 467 VSDV*YHPRLKDIYLKVDEMNVKLQEYGYRARTREVLFDIEEEEKEDWPLLLFSLQLILA 646
+ HPR K+IYLK++EM+ +L EYG++ RT EVLFDIEEEEKED L S +L +A
Sbjct: 471 LMGDKTHPRSKEIYLKLEEMSRRLHEYGHKPRTLEVLFDIEEEEKED-ALSYHSERLAIA 529
Query: 647 YLL 655
+ L
Sbjct: 530 FAL 532
Score = 21.2 bits (43), Expect(2) = 3e-26
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = +3
Query: 63 IGLVNEGRKHFESMADL 113
+GLV EG FESM ++
Sbjct: 332 VGLVEEGCDVFESMKEV 348
Score = 69.7 bits (169), Expect = 9e-10
Identities = 39/66 (59%), Positives = 46/66 (69%), Gaps = 1/66 (1%)
Frame = +1
Query: 604 RLAIAFVLIATDFGISIRVIKNLRVCVDCHYINELLSEIYKREIIVRDRIGFITFTL-VH 780
RLAIAF LIA+ IR+IKNLRVC DCH ++L+S+IY+REIIVRDR F F
Sbjct: 525 RLAIAFALIASHHCAPIRIIKNLRVCGDCHTSSKLISKIYEREIIVRDRNRFHHFKEGAC 584
Query: 781 SFMDYW 798
S DYW
Sbjct: 585 SCSDYW 590