BLASTX nr result

ID: Scutellaria24_contig00015999 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00015999
         (629 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002527728.1| zinc finger protein, putative [Ricinus commu...    86   4e-15
emb|CBI30569.3| unnamed protein product [Vitis vinifera]               74   2e-11
ref|XP_002270031.1| PREDICTED: dof zinc finger protein DOF5.1-li...    74   2e-11
ref|XP_002308153.1| f-box family protein [Populus trichocarpa] g...    57   3e-06

>ref|XP_002527728.1| zinc finger protein, putative [Ricinus communis]
           gi|223532869|gb|EEF34641.1| zinc finger protein,
           putative [Ricinus communis]
          Length = 338

 Score = 86.3 bits (212), Expect = 4e-15
 Identities = 64/208 (30%), Positives = 85/208 (40%)
 Frame = +1

Query: 1   LRNVPVGGGCXXXXXXXXXXXXXXXXXXDQQANPSPTTPVSANGGAGGATDNMLGLTAPL 180
           LRNVPVGGGC                  D+Q     ++ +S++G     T ++LGL   +
Sbjct: 111 LRNVPVGGGCRRNKRSKGSSSSKSPVSSDRQTASGTSSTLSSSG-----TSDILGLGPQV 165

Query: 181 PPLRFMSPLGQLTDSFTGDIGLNYSGIGAPSMGTNEMNFHXXXXXXXXXXXXXXXXXXXX 360
           PPLRFM+PL  L +    DIGLNY  + AP  GT+++NF                     
Sbjct: 166 PPLRFMAPLHHLNEYAPCDIGLNYGALSAPVGGTSDLNFQ-IGSALASTGLGGGSGVAGG 224

Query: 361 XXXXXXXXXXXXXXXXXXXXXXXXXDTSSPGGIYXXXXXXXXXXXXXXXXXTSHHQIRPK 540
                                    D SS  G+Y                     Q+RP+
Sbjct: 225 SLLSMGGLEQWRLQQGQQFPFLGGLDPSSSAGLYPFEGGAEPSGYGGGIGG----QVRPR 280

Query: 541 FSSSMLSQMASVKMEDNPEHRFSRQLLG 624
            S+S+ +Q ASVKMEDN E   SRQ LG
Sbjct: 281 TSTSLTTQFASVKMEDNHELNLSRQFLG 308


>emb|CBI30569.3| unnamed protein product [Vitis vinifera]
          Length = 323

 Score = 73.9 bits (180), Expect = 2e-11
 Identities = 44/99 (44%), Positives = 53/99 (53%)
 Frame = +1

Query: 1   LRNVPVGGGCXXXXXXXXXXXXXXXXXXDQQANPSPTTPVSANGGAGGATDNMLGLTAPL 180
           LRNVPVGGGC                  D+QA  S T  + +N     +T  +LGL   +
Sbjct: 112 LRNVPVGGGCRRNKRSKGSSSKSPVSG-DRQAGSSSTGAIHSNC----STAEILGLAPQI 166

Query: 181 PPLRFMSPLGQLTDSFTGDIGLNYSGIGAPSMGTNEMNF 297
           PP+RFM+PL  L D   GDIGLNYSGI     GT +MNF
Sbjct: 167 PPMRFMAPLHHLADYGAGDIGLNYSGIPTAVGGTGDMNF 205


>ref|XP_002270031.1| PREDICTED: dof zinc finger protein DOF5.1-like [Vitis vinifera]
          Length = 333

 Score = 73.9 bits (180), Expect = 2e-11
 Identities = 44/99 (44%), Positives = 53/99 (53%)
 Frame = +1

Query: 1   LRNVPVGGGCXXXXXXXXXXXXXXXXXXDQQANPSPTTPVSANGGAGGATDNMLGLTAPL 180
           LRNVPVGGGC                  D+QA  S T  + +N     +T  +LGL   +
Sbjct: 112 LRNVPVGGGCRRNKRSKGSSSKSPVSG-DRQAGSSSTGAIHSNC----STAEILGLAPQI 166

Query: 181 PPLRFMSPLGQLTDSFTGDIGLNYSGIGAPSMGTNEMNF 297
           PP+RFM+PL  L D   GDIGLNYSGI     GT +MNF
Sbjct: 167 PPMRFMAPLHHLADYGAGDIGLNYSGIPTAVGGTGDMNF 205


>ref|XP_002308153.1| f-box family protein [Populus trichocarpa]
           gi|222854129|gb|EEE91676.1| f-box family protein
           [Populus trichocarpa]
          Length = 326

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 36/100 (36%), Positives = 52/100 (52%), Gaps = 1/100 (1%)
 Frame = +1

Query: 1   LRNVPVGGGCXXXXXXXXXXXXXXXXXXDQQANPSPTTPVSANGGAGGATDNMLGLTAPL 180
           LR+VPVGGGC                   Q  + S +T VS+N G    T +  GL   +
Sbjct: 114 LRSVPVGGGCRRNKRSKESSSKSPISGYRQTGSCSSST-VSSNSG----TSDTFGLGPQV 168

Query: 181 PPLRFMSPLGQLTDSFTGDIGLNYSGIGAPSM-GTNEMNF 297
           PP+RFM+PL   T+  +G+IGLNY  +    + G +++NF
Sbjct: 169 PPMRFMAPLHHHTEFASGNIGLNYGALSKTLVGGASDLNF 208


Top