BLASTX nr result

ID: Scutellaria24_contig00015870 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00015870
         (286 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283327.1| PREDICTED: pentatricopeptide repeat-containi...    97   1e-18
ref|XP_003527773.1| PREDICTED: pentatricopeptide repeat-containi...    94   1e-17
ref|XP_002308709.1| predicted protein [Populus trichocarpa] gi|2...    90   2e-16
ref|XP_002515418.1| pentatricopeptide repeat-containing protein,...    89   4e-16
ref|XP_004157129.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...    79   5e-13

>ref|XP_002283327.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
           chloroplastic [Vitis vinifera]
           gi|296082142|emb|CBI21147.3| unnamed protein product
           [Vitis vinifera]
          Length = 1113

 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 53/99 (53%), Positives = 71/99 (71%), Gaps = 5/99 (5%)
 Frame = +3

Query: 3   WKKIKKKNNGFRGLVMKSSNGVPL---RGKRDMSSEEIIGHLKSIHDLDQALSFFKAVAD 173
           WKK +KK  G  G V++SS  V +   + +  MSSEE+   LKSI D +QA SFF +VA+
Sbjct: 55  WKKHRKKQVGVCGFVIRSSFDVVVVKRKPESTMSSEEVYRVLKSISDPNQAFSFFNSVAE 114

Query: 174 MPHVVHSTQTCNYMLELLNG--RTEDMVMVFDVMQKQII 284
           MP V+H+T+TCNY+LE+L    R EDMV+VF++MQKQII
Sbjct: 115 MPRVIHTTETCNYVLEMLRAHRRVEDMVVVFNLMQKQII 153


>ref|XP_003527773.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
           chloroplastic-like [Glycine max]
          Length = 1113

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 49/99 (49%), Positives = 68/99 (68%), Gaps = 5/99 (5%)
 Frame = +3

Query: 3   WKKIKKKNNGFRGLVMKSSNGVPL---RGKRDMSSEEIIGHLKSIHDLDQALSFFKAVAD 173
           WKK  K+  G R    + ++ V +   + K  +SSEE+IG LKSI D + ALS+FK V+ 
Sbjct: 55  WKKHGKRQLGLRVFETRCAHEVVVVNGKSKSSVSSEEVIGALKSISDPNSALSYFKMVSQ 114

Query: 174 MPHVVHSTQTCNYMLELL--NGRTEDMVMVFDVMQKQII 284
           +P++VH+ +TCNYMLE L  +GR EDM  VFD+MQKQ+I
Sbjct: 115 LPNIVHTPETCNYMLEFLRVHGRVEDMAFVFDLMQKQVI 153


>ref|XP_002308709.1| predicted protein [Populus trichocarpa] gi|222854685|gb|EEE92232.1|
           predicted protein [Populus trichocarpa]
          Length = 1115

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 50/102 (49%), Positives = 67/102 (65%), Gaps = 8/102 (7%)
 Frame = +3

Query: 3   WKKIKKKNNGFRGLVMKSSN------GVPLRGKRDMSSEEIIGHLKSIHDLDQALSFFKA 164
           WKK  KK   F G  +KS N      G P +G    SS+E++G L SI D   AL +FK+
Sbjct: 57  WKKNNKKQVAFCGFALKSQNEELVVNGKPRKGS---SSDEVLGVLHSISDPIHALFYFKS 113

Query: 165 VADMPHVVHSTQTCNYMLELL--NGRTEDMVMVFDVMQKQII 284
           V ++P+VVH+T+TCN+MLE+L  + R EDM  VFD+MQ+QII
Sbjct: 114 VGELPNVVHTTETCNHMLEILRVHRRVEDMAFVFDLMQRQII 155


>ref|XP_002515418.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223545362|gb|EEF46867.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 1113

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 47/99 (47%), Positives = 71/99 (71%), Gaps = 5/99 (5%)
 Frame = +3

Query: 3   WKKIKKKNNGFRGLVMKSSNGVPL---RGKRDMSSEEIIGHLKSIHDLDQALSFFKAVAD 173
           W+K K++  GF G+ +KSS+G+ +   + K  +SS+E++  L SI D   A S+F +VA+
Sbjct: 57  WEKHKERQVGFGGVAVKSSHGLVVAKRKPKNALSSKEVMAVLNSILDPTDAFSYFNSVAE 116

Query: 174 MPHVVHSTQTCNYMLELL--NGRTEDMVMVFDVMQKQII 284
           MP VVH+T+TCN+MLE+L  + R  DMV+VF++MQ QII
Sbjct: 117 MPFVVHTTETCNHMLEILRIHRRVGDMVVVFNLMQNQII 155


>ref|XP_004157129.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At4g31850, chloroplastic-like [Cucumis sativus]
          Length = 1113

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 42/99 (42%), Positives = 68/99 (68%), Gaps = 5/99 (5%)
 Frame = +3

Query: 3   WKKIKKKNNGFRGLVMKSSNGVPL-RGKRDM--SSEEIIGHLKSIHDLDQALSFFKAVAD 173
           WKK +KK   F  L +++   V + +GK ++  S +E++G LKS+ D  +ALS+F ++++
Sbjct: 55  WKKHRKKRKDFCRLALQNPEQVMVVKGKTEIRVSEDEVLGVLKSMTDPIRALSYFYSISE 114

Query: 174 MPHVVHSTQTCNYMLELL--NGRTEDMVMVFDVMQKQII 284
            P V+H+T+TCN+MLE L  + + EDM  VF+ MQK+II
Sbjct: 115 FPTVLHTTETCNFMLEFLRVHDKVEDMAAVFEFMQKKII 153


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