BLASTX nr result

ID: Scutellaria24_contig00015869 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00015869
         (1768 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN72416.1| hypothetical protein VITISV_027905 [Vitis vinifera]   615   e-173
ref|XP_002320901.1| predicted protein [Populus trichocarpa] gi|2...   599   e-169
ref|XP_003626608.1| Pentatricopeptide repeat-containing protein ...   598   e-168
ref|XP_004138384.1| PREDICTED: pentatricopeptide repeat-containi...   544   e-152
ref|NP_001154199.1| uncharacterized protein [Arabidopsis thalian...   514   e-143

>emb|CAN72416.1| hypothetical protein VITISV_027905 [Vitis vinifera]
          Length = 422

 Score =  615 bits (1586), Expect = e-173
 Identities = 292/412 (70%), Positives = 352/412 (85%), Gaps = 3/412 (0%)
 Frame = +3

Query: 357  SSIGSPARIQKLIASQSDPLLAKEIFDLASRQPNFRHSYATYHTLILKLGRSHHFSLMQA 536
            S IGSP+R+QKLIASQSDPLLAKEIFDLAS QPNF+HSY+++H LILKLG +  FSLMQ 
Sbjct: 9    SPIGSPSRVQKLIASQSDPLLAKEIFDLASLQPNFKHSYSSFHILILKLGWARQFSLMQD 68

Query: 537  LLSSLKSHDYAISPSLFTHIIQIYGDSNLPERALKTFYMILEHNIKPRTKHLNSILEILV 716
            LL  LKS  Y+I+PSLF+ II+IYG++NLP++ALKTF+ +L+ + KP  KHLN +L++LV
Sbjct: 69   LLMRLKSEQYSINPSLFSDIIEIYGEANLPDQALKTFHSMLQFHSKPLPKHLNXLLQLLV 128

Query: 717  ANNNFIRPAFDLFRSAHKYGVSPNTRSYNILMQAFCLNGDLSIAYTLFNQMFKRDVLPDV 896
            ++ N+IRPAFDLF+SAH+YGVSP+T+SYNILM AFC NGDLSIAYTLFNQMFKRDV PDV
Sbjct: 129  SHRNYIRPAFDLFKSAHRYGVSPDTKSYNILMSAFCFNGDLSIAYTLFNQMFKRDVAPDV 188

Query: 897  ESYRILMQGLCRKSQVNKAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLKEAYKLLCR 1076
            ESYRILMQGLCRKSQVN+AVDLLEDMLNKG+VPD LSYTTLLNSLCRKKKLKEAYKLLCR
Sbjct: 189  ESYRILMQGLCRKSQVNRAVDLLEDMLNKGYVPDALSYTTLLNSLCRKKKLKEAYKLLCR 248

Query: 1077 MKVKGCNPDIIHYNTVISGYCKAGRAADACKVLEDMPSNGCLPNLVSYQSIVGGLCNLGM 1256
            MKVKGCNPDI+HYNTVI G+C+ GR  DACKVLEDMPSNGC PNL+SY ++V GLC+ G+
Sbjct: 249  MKVKGCNPDIVHYNTVILGFCREGRXLDACKVLEDMPSNGCSPNLMSYGTLVSGLCDQGL 308

Query: 1257 YDEAKEYVKVMMSKEFPPHFSLVHMLIKGFCKIGKVEDACEVLFEFLSHGNTPHTDTWTE 1436
            YDEAK YV+ M+SK F PHFS+ H LI GFC +GK+E+ACEVL E L HG   HT+TW  
Sbjct: 309  YDEAKNYVEEMLSKGFSPHFSVFHALINGFCNVGKLEEACEVLXEMLRHGEAXHTETWVA 368

Query: 1437 ILPRLCEVE---AMEDALKQVLKVEIKPDTRIVDVGVGLEEYLMMKIKAISR 1583
            I+PR+CEV+    ME+   + LK+EI P+TR+V+ G+GLEEY++ K++  SR
Sbjct: 369  IIPRICEVDKLVRMENIFDEXLKLEITPNTRLVEAGIGLEEYVIRKVRDKSR 420


>ref|XP_002320901.1| predicted protein [Populus trichocarpa] gi|222861674|gb|EEE99216.1|
            predicted protein [Populus trichocarpa]
          Length = 475

 Score =  599 bits (1544), Expect = e-169
 Identities = 288/449 (64%), Positives = 361/449 (80%), Gaps = 3/449 (0%)
 Frame = +3

Query: 228  RNAPAISPNVSFSYCSGSPNHHPQQEEDNICRQKYQGRKEKGESSIGSPARIQKLIASQS 407
            R  P +    S  + S SP+HH Q + +      +     K  S IGSP+R+QKLIASQS
Sbjct: 21   RTVPILPKPQSLFFYSSSPHHHQQHKRELEPSDSHPNANTK--SPIGSPSRVQKLIASQS 78

Query: 408  DPLLAKEIFDLASRQPNFRHSYATYHTLILKLGRSHHFSLMQALLSSLKSHDYAISPSLF 587
            DPLLAKEIFD ASRQPNF+HSY++Y  LILKLGR+ +FS +  LL+ LKS +Y ++P+LF
Sbjct: 79   DPLLAKEIFDYASRQPNFQHSYSSYLILILKLGRAKYFSFIDDLLTDLKSKNYPVTPTLF 138

Query: 588  THIIQIYGDSNLPERALKTFYMILEHNIKPRTKHLNSILEILVANNNFIRPAFDLFRSAH 767
            ++II IYG++NLP++ALK FY IL+ +  P  KHLN ILEILV++ N+I+PAFDLF+ AH
Sbjct: 139  SYIINIYGEANLPDKALKIFYTILKFDCNPSPKHLNGILEILVSHQNYIKPAFDLFKDAH 198

Query: 768  KYGVSPNTRSYNILMQAFCLNGDLSIAYTLFNQMFKRDVLPDVESYRILMQGLCRKSQVN 947
             Y V PNT+SYNIL++AFCLNG +S+AY+LFNQMFKRDV+PDVESYRILMQ LCRKSQVN
Sbjct: 199  TYDVFPNTKSYNILIRAFCLNGQISMAYSLFNQMFKRDVMPDVESYRILMQALCRKSQVN 258

Query: 948  KAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLKEAYKLLCRMKVKGCNPDIIHYNTVI 1127
             AVDLLEDMLNKG+VPD LSYTTLLNSLCRKKKL+EAYKLLCRMKVKGCNPDIIHYNTVI
Sbjct: 259  GAVDLLEDMLNKGYVPDALSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIIHYNTVI 318

Query: 1128 SGYCKAGRAADACKVLEDMPSNGCLPNLVSYQSIVGGLCNLGMYDEAKEYVKVMMSKEFP 1307
             G+C+ GRA DACKVLEDM SNGC+PNLVSY+++VGGLC+ GM+DEAK +++ MM K F 
Sbjct: 319  LGFCREGRAMDACKVLEDMESNGCMPNLVSYRTLVGGLCDQGMFDEAKSHLEEMMMKGFS 378

Query: 1308 PHFSLVHMLIKGFCKIGKVEDACEVLFEFLSHGNTPHTDTWTEILPRLCEVEAME---DA 1478
            PHF++ + LIKGFC +GK+E+AC V+ E L HG  PHT+TW  ++ R+CEV+ ++   + 
Sbjct: 379  PHFAVSNALIKGFCNVGKIEEACGVVEELLKHGEAPHTETWVMMVSRICEVDDLQRIGEI 438

Query: 1479 LKQVLKVEIKPDTRIVDVGVGLEEYLMMK 1565
            L +V KVE+K DTRIV+ G+GLEEYL+ +
Sbjct: 439  LDKVKKVELKGDTRIVEAGIGLEEYLIKR 467


>ref|XP_003626608.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
            gi|87240852|gb|ABD32710.1| Tetratricopeptide-like helical
            [Medicago truncatula] gi|355501623|gb|AES82826.1|
            Pentatricopeptide repeat-containing protein [Medicago
            truncatula]
          Length = 451

 Score =  598 bits (1542), Expect = e-168
 Identities = 283/413 (68%), Positives = 353/413 (85%), Gaps = 4/413 (0%)
 Frame = +3

Query: 357  SSIGSPARIQKLIASQSDPLLAKEIFDLASRQPNFRHSYATYHTLILKLGRSHHFSLMQA 536
            S IGSP R+QKLIASQSDPLLAKEIFD AS QPNFRH+Y+TY  LILK GRS HFSL+  
Sbjct: 37   SPIGSPTRVQKLIASQSDPLLAKEIFDYASLQPNFRHNYSTYLILILKFGRSKHFSLLDD 96

Query: 537  LLSSLKSHD-YAISPSLFTHIIQIYGDSNLPERALKTFYMILEHNIKPRTKHLNSILEIL 713
            LL  LKS     I+P+LF+++I+IYG++NLP++AL TFY++L+ NIKP TKHLN IL+IL
Sbjct: 97   LLRRLKSESSQPITPTLFSYLIKIYGEANLPDKALNTFYIMLQFNIKPLTKHLNRILDIL 156

Query: 714  VANNNFIRPAFDLFRSAHKYGVSPNTRSYNILMQAFCLNGDLSIAYTLFNQMFKRDVLPD 893
            V++ N++RPAFDLF+ AHK+GV P+T+SYNILM+AFCLNGD+SIAYTLFN+MFKRDV+PD
Sbjct: 157  VSHRNYLRPAFDLFKDAHKHGVFPDTKSYNILMRAFCLNGDISIAYTLFNKMFKRDVVPD 216

Query: 894  VESYRILMQGLCRKSQVNKAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLKEAYKLLC 1073
            ++SYRILMQ LCRKSQVN AVDL EDMLNKGFVPD+ +YTTLLNSLCRKKKL+EAYKLLC
Sbjct: 217  IQSYRILMQALCRKSQVNGAVDLFEDMLNKGFVPDSFTYTTLLNSLCRKKKLREAYKLLC 276

Query: 1074 RMKVKGCNPDIIHYNTVISGYCKAGRAADACKVLEDMPSNGCLPNLVSYQSIVGGLCNLG 1253
            RMKVKGCNPDI+HYNTVI G+C+ GRA DACKV++DM +NGCLPNLVSY+++V GLC+LG
Sbjct: 277  RMKVKGCNPDIVHYNTVILGFCREGRAHDACKVIDDMQANGCLPNLVSYRTLVNGLCHLG 336

Query: 1254 MYDEAKEYVKVMMSKEFPPHFSLVHMLIKGFCKIGKVEDACEVLFEFLSHGNTPHTDTWT 1433
            M DEA +YV+ M+SK F PHF+++H L+KGFC +G++E+AC VL + L H   PH DTW 
Sbjct: 337  MLDEATKYVEEMLSKGFSPHFAVIHALVKGFCNVGRIEEACGVLTKSLEHREAPHKDTWM 396

Query: 1434 EILPRLCEVE---AMEDALKQVLKVEIKPDTRIVDVGVGLEEYLMMKIKAISR 1583
             I+P++CEV+    ++  L++VLK+EIK DTRIVD G+GLE+YL+ KI+A SR
Sbjct: 397  IIVPQICEVDDGVKIDGVLEEVLKIEIKGDTRIVDAGIGLEDYLIRKIRAKSR 449


>ref|XP_004138384.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01400,
            mitochondrial-like [Cucumis sativus]
            gi|449499186|ref|XP_004160743.1| PREDICTED:
            pentatricopeptide repeat-containing protein At4g01400,
            mitochondrial-like [Cucumis sativus]
          Length = 482

 Score =  544 bits (1402), Expect = e-152
 Identities = 270/457 (59%), Positives = 352/457 (77%), Gaps = 5/457 (1%)
 Frame = +3

Query: 228  RNAPAISPNVSFSYCSGSPNHHPQQEEDN-ICRQKYQGRKEKGESSIGSPARIQKLIASQ 404
            R +P +   +S S     P+ +   E    I   K++  +++ + SIGSP R+QKLIASQ
Sbjct: 24   RKSPLLRNLISSSSSLYQPHLNVHNESKFLITNVKHEQCEDQPDFSIGSPCRVQKLIASQ 83

Query: 405  SDPLLAKEIFDLASRQPNFRHSYATYHTLILKLGRSHHFSLMQALLSSLKSHDYAISPSL 584
            SDPLLAKEIFD A RQP+FR S ++   LILKLGRS +FSL+  LL S KS  Y ++P+ 
Sbjct: 84   SDPLLAKEIFDYACRQPHFRPSSSSLLVLILKLGRSKYFSLIDDLLLSFKSRRYPVTPTA 143

Query: 585  FTHIIQIYGDSNLPERALKTFYMILEHNIKPRTKHLNSILEILVANNNFIRPAFDLFRSA 764
            F++II+IYG+++LP++ALK FY +++    P +K LN ILEILV++ NFIRPAFDLF++A
Sbjct: 144  FSYIIKIYGEADLPDKALKVFYTMIDFGCTPSSKQLNRILEILVSHRNFIRPAFDLFKNA 203

Query: 765  HKYGVSPNTRSYNILMQAFCLNGDLSIAYTLFNQMFKRDVLPDVESYRILMQGLCRKSQV 944
              +GV PNT+SYNIL++AFC NG++SIAYTLFN+MF+R+V+PDVE+YR LMQGLCRK+QV
Sbjct: 204  RHHGVLPNTKSYNILIRAFCWNGNISIAYTLFNKMFERNVIPDVETYRTLMQGLCRKNQV 263

Query: 945  NKAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLKEAYKLLCRMKVKGCNPDIIHYNTV 1124
            N AVDLLEDMLNKG++PDTLSY TLLNSLCRKKKL+EAYKLLCRMKVKGCNPDI HYNTV
Sbjct: 264  NGAVDLLEDMLNKGYIPDTLSYATLLNSLCRKKKLREAYKLLCRMKVKGCNPDIAHYNTV 323

Query: 1125 ISGYCKAGRAADACKVLEDMPSNGCLPNLVSYQSIVGGLCNLGMYDEAKEYVKVMMSKEF 1304
            I G+C+ GRA DACK+LEDM SNGCLPNLVSY+S+  GLC+ GM++ AK YV+ M  K F
Sbjct: 324  IMGFCREGRALDACKILEDMQSNGCLPNLVSYESLTNGLCDQGMFELAKGYVEEMTLKGF 383

Query: 1305 PPHFSLVHMLIKGFCKIGKVEDACEVLFEFLSHGNTPHTDTWTEILPRLCEVEAME---D 1475
             PHFS++H L+KGF  IG++ ++C VL + L  G  PH+DTW  I+  +CEVE      +
Sbjct: 384  YPHFSVIHALVKGFHSIGRIHESCSVLEDMLKRGKAPHSDTWEIIISGICEVEDTAKFCE 443

Query: 1476 ALKQVLKVEIKPDTRIVDVGVGLEEYLMMKIKA-ISR 1583
              +++LK +++ DTRIV+ G GL EYL+ K++A ISR
Sbjct: 444  VWEKILKKDVRRDTRIVEAGTGLGEYLIRKLQASISR 480


>ref|NP_001154199.1| uncharacterized protein [Arabidopsis thaliana]
            gi|223635643|sp|Q8LDU5.2|PP298_ARATH RecName:
            Full=Pentatricopeptide repeat-containing protein
            At4g01400, mitochondrial; Flags: Precursor
            gi|332656621|gb|AEE82021.1| uncharacterized protein
            [Arabidopsis thaliana]
          Length = 466

 Score =  514 bits (1323), Expect = e-143
 Identities = 242/409 (59%), Positives = 325/409 (79%), Gaps = 3/409 (0%)
 Frame = +3

Query: 354  ESSIGSPARIQKLIASQSDPLLAKEIFDLASRQPNFRHSYATYHTLILKLGRSHHFSLMQ 533
            +S IGSP R+QKLIASQSDPLLAKEIFD AS+QPNFRHS +++  LILKLGR  +F+L+ 
Sbjct: 45   KSPIGSPTRVQKLIASQSDPLLAKEIFDYASQQPNFRHSRSSHLILILKLGRGRYFNLID 104

Query: 534  ALLSSLKSHDYAISPSLFTHIIQIYGDSNLPERALKTFYMILEHNIKPRTKHLNSILEIL 713
             +L+  +S  Y ++  +FT++I++Y ++ LPE+ L TFY +LE N  P+ KHLN IL++L
Sbjct: 105  DVLAKHRSSGYPLTGEIFTYLIKVYAEAKLPEKVLSTFYKMLEFNFTPQPKHLNRILDVL 164

Query: 714  VANNNFIRPAFDLFRSAHKYGVSPNTRSYNILMQAFCLNGDLSIAYTLFNQMFKRDVLPD 893
            V++  +++ AF+LF+S+  +GV PNTRSYN+LMQAFCLN DLSIAY LF +M +RDV+PD
Sbjct: 165  VSHRGYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPD 224

Query: 894  VESYRILMQGLCRKSQVNKAVDLLEDMLNKGFVPDTLSYTTLLNSLCRKKKLKEAYKLLC 1073
            V+SY+IL+QG CRK QVN A++LL+DMLNKGFVPD LSYTTLLNSLCRK +L+EAYKLLC
Sbjct: 225  VDSYKILIQGFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLC 284

Query: 1074 RMKVKGCNPDIIHYNTVISGYCKAGRAADACKVLEDMPSNGCLPNLVSYQSIVGGLCNLG 1253
            RMK+KGCNPD++HYNT+I G+C+  RA DA KVL+DM SNGC PN VSY++++GGLC+ G
Sbjct: 285  RMKLKGCNPDLVHYNTMILGFCREDRAMDARKVLDDMLSNGCSPNSVSYRTLIGGLCDQG 344

Query: 1254 MYDEAKEYVKVMMSKEFPPHFSLVHMLIKGFCKIGKVEDACEVLFEFLSHGNTPHTDTWT 1433
            M+DE K+Y++ M+SK F PHFS+ + L+KGFC  GKVE+AC+V+   + +G T H+DTW 
Sbjct: 345  MFDEGKKYLEEMISKGFSPHFSVSNCLVKGFCSFGKVEEACDVVEVVMKNGETLHSDTWE 404

Query: 1434 EILPRLC---EVEAMEDALKQVLKVEIKPDTRIVDVGVGLEEYLMMKIK 1571
             ++P +C   E E ++  L+  +K EI  DTRIVDVG+GL  YL  K++
Sbjct: 405  MVIPLICNEDESEKIKLFLEDAVKEEITGDTRIVDVGIGLGSYLSSKLQ 453


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