BLASTX nr result

ID: Scutellaria24_contig00015685 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00015685
         (452 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285225.2| PREDICTED: pentatricopeptide repeat-containi...   166   1e-39
ref|XP_004136076.1| PREDICTED: pentatricopeptide repeat-containi...   160   8e-38
ref|XP_004158804.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   158   4e-37
emb|CBI36234.3| unnamed protein product [Vitis vinifera]              156   1e-36
ref|XP_002303270.1| predicted protein [Populus trichocarpa] gi|2...   148   4e-34

>ref|XP_002285225.2| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
            chloroplastic-like [Vitis vinifera]
          Length = 872

 Score =  166 bits (421), Expect = 1e-39
 Identities = 70/87 (80%), Positives = 82/87 (94%)
 Frame = +3

Query: 6    RNEVEASKAEVFCGHSERLAVAFGLINTAPGMPIWITKNLYMCESCHSTMKFISKVVRRE 185
            R++++ASKAE+FCGHSERLA+AFGLINT PG PIW+TKNLYMCE+CH+T+KFISKVVRR 
Sbjct: 785  RDDIDASKAEIFCGHSERLAIAFGLINTVPGTPIWVTKNLYMCENCHNTVKFISKVVRRG 844

Query: 186  ISVRDTEHFHHFKDGICSCGDENYWGR 266
            ISVRDTE FHHFKDG+CSCGDE YWG+
Sbjct: 845  ISVRDTEQFHHFKDGVCSCGDEGYWGK 871


>ref|XP_004136076.1| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
            chloroplastic-like [Cucumis sativus]
          Length = 878

 Score =  160 bits (406), Expect = 8e-38
 Identities = 66/88 (75%), Positives = 80/88 (90%)
 Frame = +3

Query: 3    FRNEVEASKAEVFCGHSERLAVAFGLINTAPGMPIWITKNLYMCESCHSTMKFISKVVRR 182
            F +E+E+S+A++FCGHSER A+AFGLINTAPGMPIW+TKNLYMC SCH+ +KFIS +VRR
Sbjct: 787  FTSEIESSRADIFCGHSERQAIAFGLINTAPGMPIWVTKNLYMCHSCHNMVKFISTIVRR 846

Query: 183  EISVRDTEHFHHFKDGICSCGDENYWGR 266
            EISVRD E +HHFKDG+CSCGDE YWG+
Sbjct: 847  EISVRDVEEYHHFKDGVCSCGDEGYWGK 874


>ref|XP_004158804.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
            protein At1g15510, chloroplastic-like [Cucumis sativus]
          Length = 878

 Score =  158 bits (400), Expect = 4e-37
 Identities = 65/88 (73%), Positives = 79/88 (89%)
 Frame = +3

Query: 3    FRNEVEASKAEVFCGHSERLAVAFGLINTAPGMPIWITKNLYMCESCHSTMKFISKVVRR 182
            F +E+E+S+A++FCGHSER A+AFGLINTAPGMPIW+ KNLYMC SCH+ +KFIS +VRR
Sbjct: 787  FTSEIESSRADIFCGHSERQAIAFGLINTAPGMPIWVXKNLYMCHSCHNMVKFISTIVRR 846

Query: 183  EISVRDTEHFHHFKDGICSCGDENYWGR 266
            EISVRD E +HHFKDG+CSCGDE YWG+
Sbjct: 847  EISVRDVEEYHHFKDGVCSCGDEGYWGK 874


>emb|CBI36234.3| unnamed protein product [Vitis vinifera]
          Length = 906

 Score =  156 bits (395), Expect = 1e-36
 Identities = 67/82 (81%), Positives = 78/82 (95%)
 Frame = +3

Query: 6    RNEVEASKAEVFCGHSERLAVAFGLINTAPGMPIWITKNLYMCESCHSTMKFISKVVRRE 185
            R++++ASKAE+FCGHSERLA+AFGLINT PG PIW+TKNLYMCE+CH+T+KFISKVVRR 
Sbjct: 785  RDDIDASKAEIFCGHSERLAIAFGLINTVPGTPIWVTKNLYMCENCHNTVKFISKVVRRG 844

Query: 186  ISVRDTEHFHHFKDGICSCGDE 251
            ISVRDTE FHHFKDG+CSCGDE
Sbjct: 845  ISVRDTEQFHHFKDGVCSCGDE 866


>ref|XP_002303270.1| predicted protein [Populus trichocarpa] gi|222840702|gb|EEE78249.1|
           predicted protein [Populus trichocarpa]
          Length = 805

 Score =  148 bits (374), Expect = 4e-34
 Identities = 62/78 (79%), Positives = 74/78 (94%)
 Frame = +3

Query: 15  VEASKAEVFCGHSERLAVAFGLINTAPGMPIWITKNLYMCESCHSTMKFISKVVRREISV 194
           ++ SKA++FCGHSER A+A+ LIN+APGMPIW+TKNLYMC+SCHST+KFISK+VRREISV
Sbjct: 728 IQTSKADIFCGHSERQAIAYSLINSAPGMPIWVTKNLYMCQSCHSTVKFISKIVRREISV 787

Query: 195 RDTEHFHHFKDGICSCGD 248
           RDTE FHHFKDG+CSCGD
Sbjct: 788 RDTEQFHHFKDGLCSCGD 805


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