BLASTX nr result

ID: Scutellaria24_contig00015356 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00015356
         (2493 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_007353898.1| photosystem II protein K (chloroplast) [Tect...   125   5e-26
gb|AEC11007.1| photosystem II protein K [Camellia sinensis]           123   3e-25
prf||1211235D ORF 98                                                  120   1e-24
emb|CAA31277.2| K protein [Spinacia oleracea] gi|226076|prf||141...   120   1e-24
ref|YP_007317231.1| photosystem II protein K (chloroplast) [Came...   118   9e-24

>ref|YP_007353898.1| photosystem II protein K (chloroplast) [Tectona grandis]
            gi|438687587|emb|CCP47113.1| photosystem II protein K
            (chloroplast) [Tectona grandis]
            gi|438688271|emb|CCP47202.1| photosystem II protein K
            (chloroplast) [Tectona grandis]
            gi|438688395|emb|CCP47291.1| photosystem II protein K
            (chloroplast) [Tectona grandis]
          Length = 64

 Score =  125 bits (314), Expect = 5e-26
 Identities = 62/64 (96%), Positives = 63/64 (98%)
 Frame = -1

Query: 2295 MSVMLNIVSLICICINSPLYSSSFFFGKLPEAYAFLNPIVDVMPVIPVLFFLLAFVWQAA 2116
            MSVMLNIVSLICICI+S LYSSSFFFGKLPEAYAFLNPIVDVMPVIPVLFFLLAFVWQAA
Sbjct: 1    MSVMLNIVSLICICISSTLYSSSFFFGKLPEAYAFLNPIVDVMPVIPVLFFLLAFVWQAA 60

Query: 2115 VSFR 2104
            VSFR
Sbjct: 61   VSFR 64


>gb|AEC11007.1| photosystem II protein K [Camellia sinensis]
          Length = 64

 Score =  123 bits (308), Expect = 3e-25
 Identities = 61/64 (95%), Positives = 61/64 (95%)
 Frame = -1

Query: 2295 MSVMLNIVSLICICINSPLYSSSFFFGKLPEAYAFLNPIVDVMPVIPVLFFLLAFVWQAA 2116
            MSVMLNI SLICICINS LYSSSFFF KLPEAYAFLNPIVDVMPVIPVLFFLLAFVWQAA
Sbjct: 1    MSVMLNIFSLICICINSALYSSSFFFAKLPEAYAFLNPIVDVMPVIPVLFFLLAFVWQAA 60

Query: 2115 VSFR 2104
            VSFR
Sbjct: 61   VSFR 64


>prf||1211235D ORF 98
          Length = 98

 Score =  120 bits (302), Expect = 1e-24
 Identities = 61/86 (70%), Positives = 72/86 (83%)
 Frame = -1

Query: 2361 PYLLSFSLYQKRNQNAIISKNKMSVMLNIVSLICICINSPLYSSSFFFGKLPEAYAFLNP 2182
            P+L+S +    +++   +SKNK SVMLN  SLI IC+NS L+SSSFFFGKLPEAYAFLNP
Sbjct: 17   PFLISIT----QSKCNYLSKNKKSVMLNTFSLIGICLNSTLFSSSFFFGKLPEAYAFLNP 72

Query: 2181 IVDVMPVIPVLFFLLAFVWQAAVSFR 2104
            IVD+MPVIP+ FFLLAFVWQAAVSFR
Sbjct: 73   IVDIMPVIPLFFFLLAFVWQAAVSFR 98


>emb|CAA31277.2| K protein [Spinacia oleracea] gi|226076|prf||1410212A photosystem II
            low MW protein
          Length = 98

 Score =  120 bits (302), Expect = 1e-24
 Identities = 61/86 (70%), Positives = 72/86 (83%)
 Frame = -1

Query: 2361 PYLLSFSLYQKRNQNAIISKNKMSVMLNIVSLICICINSPLYSSSFFFGKLPEAYAFLNP 2182
            P+L+S +    +++   +SKNK SVMLN  SLI IC+NS L+SSSFFFGKLPEAYAFLNP
Sbjct: 17   PFLISIT----QSKCNYLSKNKKSVMLNTFSLIGICLNSTLFSSSFFFGKLPEAYAFLNP 72

Query: 2181 IVDVMPVIPVLFFLLAFVWQAAVSFR 2104
            IVD+MPVIP+ FFLLAFVWQAAVSFR
Sbjct: 73   IVDIMPVIPLFFFLLAFVWQAAVSFR 98


>ref|YP_007317231.1| photosystem II protein K (chloroplast) [Camellia sinensis]
            gi|430728255|gb|AGA55579.1| photosystem II protein K
            (chloroplast) [Camellia sinensis]
          Length = 61

 Score =  118 bits (295), Expect = 9e-24
 Identities = 58/61 (95%), Positives = 58/61 (95%)
 Frame = -1

Query: 2286 MLNIVSLICICINSPLYSSSFFFGKLPEAYAFLNPIVDVMPVIPVLFFLLAFVWQAAVSF 2107
            MLNI SLICICINS LYSSSFFF KLPEAYAFLNPIVDVMPVIPVLFFLLAFVWQAAVSF
Sbjct: 1    MLNIFSLICICINSALYSSSFFFAKLPEAYAFLNPIVDVMPVIPVLFFLLAFVWQAAVSF 60

Query: 2106 R 2104
            R
Sbjct: 61   R 61


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