BLASTX nr result

ID: Scutellaria24_contig00015248 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00015248
         (760 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002323326.1| predicted protein [Populus trichocarpa] gi|2...   220   2e-55
ref|XP_002278976.2| PREDICTED: DNA repair protein recA homolog 2...   218   1e-54
gb|ABO36632.1| putative recA protein [Solanum lycopersicum]           214   2e-53
ref|XP_002533897.1| DNA repair protein reca, putative [Ricinus c...   206   4e-51
ref|NP_187625.2| DNA repair protein recA-like 2 [Arabidopsis tha...   196   3e-48

>ref|XP_002323326.1| predicted protein [Populus trichocarpa] gi|222867956|gb|EEF05087.1|
           predicted protein [Populus trichocarpa]
          Length = 323

 Score =  220 bits (561), Expect = 2e-55
 Identities = 111/180 (61%), Positives = 136/180 (75%)
 Frame = -3

Query: 701 PQCEVDGLQCGSYRDLQSKIMTQALRKIHYSQCNSSTLIIFINQIRKNLKLVEGSVRAEE 522
           PQ E+D    G++ D+QS++MTQALRKI+YS C S TLIIF+NQ+RK+LK    S RAEE
Sbjct: 148 PQREIDTAVGGTFEDIQSRLMTQALRKINYSLCQSQTLIIFLNQVRKSLK----SGRAEE 203

Query: 521 VTCGGNALKFYSAIRLRISRKELLKTEDKATGLGICVQVIKNKLAPSMAKAELSIRFGKG 342
           VTCGGNALKFYSA+RLR+ R  LLKTED+ TGLG+C QV+KNKLAP+M KAEL I+FG+G
Sbjct: 204 VTCGGNALKFYSAVRLRMIRTRLLKTEDRITGLGVCAQVVKNKLAPAMTKAELEIQFGRG 263

Query: 341 FCRESEALDLACEHGVIVKDGSCYYIGRKVLHSREEVLRYLTSNDEALDDIIRTLRCHLF 162
           FC ESE L+LACEH +I K+GS Y IGRKV  +     +YL  N+   D I+  LR  LF
Sbjct: 264 FCSESEVLELACEHSLIKKEGSSYVIGRKVFGNERVAEQYLMENEGVHDQIVAKLREKLF 323


>ref|XP_002278976.2| PREDICTED: DNA repair protein recA homolog 2, mitochondrial-like
           [Vitis vinifera] gi|296087050|emb|CBI33377.3| unnamed
           protein product [Vitis vinifera]
          Length = 398

 Score =  218 bits (554), Expect = 1e-54
 Identities = 106/182 (58%), Positives = 138/182 (75%)
 Frame = -3

Query: 701 PQCEVDGLQCGSYRDLQSKIMTQALRKIHYSQCNSSTLIIFINQIRKNLKLVEGSVRAEE 522
           PQ E+D +  G+Y+D+QS+IM QALRKIHYS C S TLIIF+NQ+R +LK   G  R +E
Sbjct: 215 PQHELDVVIGGTYQDVQSQIMAQALRKIHYSLCRSETLIIFVNQVRSSLKSSHGFGRLDE 274

Query: 521 VTCGGNALKFYSAIRLRISRKELLKTEDKATGLGICVQVIKNKLAPSMAKAELSIRFGKG 342
           VTCGGNAL+FY+A+RLR+ R  LL+TEDK TGLG+CVQV+KNKLA +  KA+L I+FG+G
Sbjct: 275 VTCGGNALRFYAAVRLRVMRTGLLRTEDKVTGLGVCVQVVKNKLAHATKKADLGIQFGRG 334

Query: 341 FCRESEALDLACEHGVIVKDGSCYYIGRKVLHSREEVLRYLTSNDEALDDIIRTLRCHLF 162
            C ESE L+LACEHGVI K+GS Y I  +  ++++E  +Y+  N   L+ I+  LR HLF
Sbjct: 335 ICFESEVLELACEHGVIWKEGSKYIIEGEAFNNKQEAEQYMAQNSGVLERIVSFLRSHLF 394

Query: 161 ER 156
           ER
Sbjct: 395 ER 396


>gb|ABO36632.1| putative recA protein [Solanum lycopersicum]
          Length = 395

 Score =  214 bits (544), Expect = 2e-53
 Identities = 112/181 (61%), Positives = 137/181 (75%), Gaps = 1/181 (0%)
 Frame = -3

Query: 701 PQCEVDGLQCGSYRDLQSKIMTQALRKIHYSQCNSSTLIIFINQIRKNLK-LVEGSVRAE 525
           PQ E+D   C S + LQSKIMTQALRKIHYS  NSSTLIIFINQ+R++ K LV GS   +
Sbjct: 205 PQLEIDATLCDSPKGLQSKIMTQALRKIHYSLGNSSTLIIFINQVRRSNKGLVRGSGCMD 264

Query: 524 EVTCGGNALKFYSAIRLRISRKELLKTEDKATGLGICVQVIKNKLAPSMAKAELSIRFGK 345
           EVTCGGNAL FY+AIRLR  RK+LLKT  K TGL ICV+V+KNKLAP+  +AELSI++G 
Sbjct: 265 EVTCGGNALPFYAAIRLRTIRKQLLKTRHKITGLRICVKVVKNKLAPAATEAELSIQYGG 324

Query: 344 GFCRESEALDLACEHGVIVKDGSCYYIGRKVLHSREEVLRYLTSNDEALDDIIRTLRCHL 165
           GFC E E L+LACEH V++K+G  Y+I  +VL+SR++   YL SN + L  I+ TLR  L
Sbjct: 325 GFCIEPEVLELACEHEVVLKEGGSYFIDGQVLNSRQDAEDYLASNGDILAKIVETLRDQL 384

Query: 164 F 162
           F
Sbjct: 385 F 385


>ref|XP_002533897.1| DNA repair protein reca, putative [Ricinus communis]
           gi|223526148|gb|EEF28487.1| DNA repair protein reca,
           putative [Ricinus communis]
          Length = 388

 Score =  206 bits (524), Expect = 4e-51
 Identities = 105/180 (58%), Positives = 135/180 (75%)
 Frame = -3

Query: 701 PQCEVDGLQCGSYRDLQSKIMTQALRKIHYSQCNSSTLIIFINQIRKNLKLVEGSVRAEE 522
           PQ E+D +  GS  D QS+IM+QA+RKI+YS   S TLIIF+NQ+R N+K  +G  + +E
Sbjct: 210 PQLELDTM-LGSTEDRQSRIMSQAVRKINYSLSQSKTLIIFLNQVRANVKSGQGLGQVDE 268

Query: 521 VTCGGNALKFYSAIRLRISRKELLKTEDKATGLGICVQVIKNKLAPSMAKAELSIRFGKG 342
            TCGGNALKFYSA+RLR++RK LLKTED+ TGL + VQV+KNKLAP+M KAEL I+FG+G
Sbjct: 269 ATCGGNALKFYSAVRLRMARKALLKTEDEITGLRVSVQVVKNKLAPAMKKAELGIQFGRG 328

Query: 341 FCRESEALDLACEHGVIVKDGSCYYIGRKVLHSREEVLRYLTSNDEALDDIIRTLRCHLF 162
           FC ESE L+LACE+GVI ++GS Y I  +V  ++     YL  N +  D I+RTLR HLF
Sbjct: 329 FCSESEVLELACEYGVIRQEGSTYCIEEEVFSNKHAAEEYLAENYKVHDRIVRTLRTHLF 388


>ref|NP_187625.2| DNA repair protein recA-like 2 [Arabidopsis thaliana]
           gi|75158993|sp|Q8RY99.1|RECAM_ARATH RecName: Full=DNA
           repair protein recA homolog 2, mitochondrial; AltName:
           Full=Recombinase A homolog 2; Flags: Precursor
           gi|18996122|gb|AAL79768.1| RecA protein [Arabidopsis
           thaliana] gi|22531124|gb|AAM97066.1| putative RecA
           protein [Arabidopsis thaliana]
           gi|23198012|gb|AAN15533.1| putative RecA protein
           [Arabidopsis thaliana] gi|332641343|gb|AEE74864.1| DNA
           repair protein recA-like 2 [Arabidopsis thaliana]
          Length = 389

 Score =  196 bits (499), Expect = 3e-48
 Identities = 98/181 (54%), Positives = 129/181 (71%)
 Frame = -3

Query: 701 PQCEVDGLQCGSYRDLQSKIMTQALRKIHYSQCNSSTLIIFINQIRKNLKLVEGSVRAEE 522
           PQCE+D      YRD QS+IMTQALRKIHYS   S TLI+F+NQ+R ++K       AEE
Sbjct: 208 PQCELDAPVGERYRDTQSRIMTQALRKIHYSVGYSQTLIVFLNQVRSHVKSNMHFPHAEE 267

Query: 521 VTCGGNALKFYSAIRLRISRKELLKTEDKATGLGICVQVIKNKLAPSMAKAELSIRFGKG 342
           VTCGGNAL F++AIRL++ R  L+KT +K +GL +CVQV+KNKLAP   K+EL I FG G
Sbjct: 268 VTCGGNALPFHAAIRLKMIRTGLIKTANKISGLNVCVQVVKNKLAPGKKKSELGIHFGHG 327

Query: 341 FCRESEALDLACEHGVIVKDGSCYYIGRKVLHSREEVLRYLTSNDEALDDIIRTLRCHLF 162
           F  E E L+LACEHGVI+++G+ Y+I  +V+  ++   +YL  N EALD ++  LR  LF
Sbjct: 328 FYVEREVLELACEHGVILREGTSYFIEGEVIEGKDAAEKYLVENKEALDTVVAILRNQLF 387

Query: 161 E 159
           +
Sbjct: 388 K 388


Top