BLASTX nr result

ID: Scutellaria24_contig00015234 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00015234
         (809 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002321105.1| predicted protein [Populus trichocarpa] gi|2...   200   4e-49
ref|XP_002264970.2| PREDICTED: DNA topoisomerase 3-beta-1-like [...   199   8e-49
ref|XP_002516387.1| prokaryotic DNA topoisomerase, putative [Ric...   199   8e-49
ref|XP_004147675.1| PREDICTED: DNA topoisomerase 3-beta-1-like [...   192   1e-46
ref|XP_003538536.1| PREDICTED: DNA topoisomerase 3-beta-1-like [...   191   1e-46

>ref|XP_002321105.1| predicted protein [Populus trichocarpa] gi|222861878|gb|EEE99420.1|
            predicted protein [Populus trichocarpa]
          Length = 837

 Score =  200 bits (508), Expect = 4e-49
 Identities = 93/142 (65%), Positives = 106/142 (74%), Gaps = 2/142 (1%)
 Frame = -1

Query: 809  PTCQHSMISQGVCACPECDGTLVLDPVSAPKWRLYCNMCNCLISLPEGAHRISTTKDHCS 630
            PTC+HS+I+QGVCACPEC+GTLVLDP+SAPKWRLYCNMCNCL+ LP+GAHRISTT++ C 
Sbjct: 696  PTCRHSLIAQGVCACPECNGTLVLDPISAPKWRLYCNMCNCLVLLPQGAHRISTTREQCP 755

Query: 629  NCDSTILEVDFNKKTTPLKDGATLHVGCILCDELLHSLVEMK--XXXXXXXXXXXXXXXX 456
             CDSTI+EVDFNK TTPL+DGATLHVGCILCD LLHSLVE+K                  
Sbjct: 756  ECDSTIIEVDFNKNTTPLEDGATLHVGCILCDNLLHSLVEVKHGKSFFKRAGKWARARGR 815

Query: 455  XXXXXXXXXXKQEDPKMSFRDF 390
                       + DPKMSFRDF
Sbjct: 816  GAYRGRGRGLGKMDPKMSFRDF 837


>ref|XP_002264970.2| PREDICTED: DNA topoisomerase 3-beta-1-like [Vitis vinifera]
          Length = 894

 Score =  199 bits (505), Expect = 8e-49
 Identities = 94/144 (65%), Positives = 105/144 (72%), Gaps = 4/144 (2%)
 Frame = -1

Query: 809  PTCQHSMISQGVCACPECDGTLVLDPVSAPKWRLYCNMCNCLISLPEGAHRISTTKDHCS 630
            PTC HS+I+QGVCACPEC GTLVLDPVSAPKWRLYCNMCNCL+ LP+GAH+ISTT+D C 
Sbjct: 751  PTCPHSLIAQGVCACPECSGTLVLDPVSAPKWRLYCNMCNCLVYLPQGAHKISTTRDRCP 810

Query: 629  NCDSTILEVDFNKKTTPLKDGATLHVGCILCDELLHSLVEMKXXXXXXXXXXXXXXXXXX 450
             C+STILEVDFNKKTTPL DG+TL+ GCILCDELLHSLVEMK                  
Sbjct: 811  ECESTILEVDFNKKTTPLLDGSTLYTGCILCDELLHSLVEMKHGKSFFKRMGSRGRGRGS 870

Query: 449  XXXXXXXXKQ----EDPKMSFRDF 390
                     +    +DPKMSFRDF
Sbjct: 871  GRGGFRGRGRGGKWDDPKMSFRDF 894


>ref|XP_002516387.1| prokaryotic DNA topoisomerase, putative [Ricinus communis]
            gi|223544485|gb|EEF46004.1| prokaryotic DNA
            topoisomerase, putative [Ricinus communis]
          Length = 865

 Score =  199 bits (505), Expect = 8e-49
 Identities = 92/143 (64%), Positives = 106/143 (74%), Gaps = 3/143 (2%)
 Frame = -1

Query: 809  PTCQHSMISQGVCACPECDGTLVLDPVSAPKWRLYCNMCNCLISLPEGAHRISTTKDHCS 630
            PTC+HS+I+QGVCACPEC GTLVLDPVSAPKWRLYCNMCNCL+ LP+GAHRI+TT++ C 
Sbjct: 723  PTCRHSLIAQGVCACPECSGTLVLDPVSAPKWRLYCNMCNCLVLLPQGAHRIATTRERCP 782

Query: 629  NCDSTILEVDFNKKTTPLKDGATLHVGCILCDELLHSLVEMKXXXXXXXXXXXXXXXXXX 450
             CDSTI+EVDFNK TTPL+DGATLH+GCILCD+LLHSLVE+K                  
Sbjct: 783  ECDSTIIEVDFNKNTTPLEDGATLHIGCILCDDLLHSLVEVKHGKSFFKRLGAGRRGRGA 842

Query: 449  XXXXXXXXK---QEDPKMSFRDF 390
                        + DPKMSFRDF
Sbjct: 843  GRGRGRGRSSGRRGDPKMSFRDF 865


>ref|XP_004147675.1| PREDICTED: DNA topoisomerase 3-beta-1-like [Cucumis sativus]
          Length = 867

 Score =  192 bits (487), Expect = 1e-46
 Identities = 91/144 (63%), Positives = 104/144 (72%), Gaps = 4/144 (2%)
 Frame = -1

Query: 809  PTCQHSMISQGVCACPECDGTLVLDPVSAPKWRLYCNMCNCLISLPEGAHRISTTKDHCS 630
            PTC+HS+I+QGVCACPEC GTLVLDPVSAP W+L CN CNCL+ LP+GAHRISTT+D C+
Sbjct: 724  PTCRHSLITQGVCACPECSGTLVLDPVSAPNWKLNCNKCNCLVFLPKGAHRISTTRDKCA 783

Query: 629  NCDSTILEVDFNKKTTPLKDGATLHVGCILCDELLHSLVEMKXXXXXXXXXXXXXXXXXX 450
            +CDSTI+EVDFNKKTTPL+DGATL VGCILCDE LHSL+EMK                  
Sbjct: 784  DCDSTIIEVDFNKKTTPLEDGATLFVGCILCDEFLHSLLEMKHGKSFIRNRGSRGRGRGR 843

Query: 449  XXXXXXXXKQE----DPKMSFRDF 390
                    +      DPKMSFRDF
Sbjct: 844  GRGRGGRGRSSGKPMDPKMSFRDF 867


>ref|XP_003538536.1| PREDICTED: DNA topoisomerase 3-beta-1-like [Glycine max]
          Length = 863

 Score =  191 bits (486), Expect = 1e-46
 Identities = 93/143 (65%), Positives = 103/143 (72%), Gaps = 3/143 (2%)
 Frame = -1

Query: 809  PTCQHSMISQGVCACPECDGTLVLDPVSAPKWRLYCNMCNCLISLPEGAHRISTTKDHCS 630
            PTC +S++SQGVCACPEC GTLVLDPVSAP+W+L CNMCNCL+ L +GAHRISTTKD C 
Sbjct: 721  PTCPNSLVSQGVCACPECSGTLVLDPVSAPRWKLCCNMCNCLVFLAQGAHRISTTKDRCP 780

Query: 629  NCDSTILEVDFNKKTTPLKDGATLHVGCILCDELLHSLVEMK---XXXXXXXXXXXXXXX 459
             CDS+I+EVDFNKKTTPL+DGATLH GCILCDELLHSLVEMK                  
Sbjct: 781  ECDSSIIEVDFNKKTTPLEDGATLHHGCILCDELLHSLVEMKHGRSFRHMSSRGRGRGAR 840

Query: 458  XXXXXXXXXXXKQEDPKMSFRDF 390
                       K  DPKMSFRDF
Sbjct: 841  KGGRGRGRGGGKMMDPKMSFRDF 863


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