BLASTX nr result

ID: Scutellaria24_contig00015209 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00015209
         (1358 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002322279.1| chromatin remodeling complex subunit [Populu...   303   5e-80
ref|XP_002280389.1| PREDICTED: SWI/SNF complex subunit SWI3A [Vi...   295   1e-77
emb|CAN80839.1| hypothetical protein VITISV_043833 [Vitis vinifera]   293   5e-77
ref|XP_003602787.1| SWI/SNF complex subunit SMARCC2 [Medicago tr...   276   1e-71
ref|XP_003527961.1| PREDICTED: SWI/SNF complex subunit SWI3A-lik...   265   2e-68

>ref|XP_002322279.1| chromatin remodeling complex subunit [Populus trichocarpa]
            gi|222869275|gb|EEF06406.1| chromatin remodeling complex
            subunit [Populus trichocarpa]
          Length = 570

 Score =  303 bits (777), Expect = 5e-80
 Identities = 170/374 (45%), Positives = 244/374 (65%), Gaps = 11/374 (2%)
 Frame = -3

Query: 1347 EKKCLVCGSCKESCDSAYYEYMKEERFILCEKCFKSGKY-EDKSAEDFKLKDTVDQ---- 1183
            +KK +VCG+C  SCDS  YE+ K + +++C+KCF  G Y E+KS +DFKLK + +     
Sbjct: 190  KKKEVVCGNCGGSCDSGQYEHSKGD-YLICQKCFNDGTYGENKSKDDFKLKVSAENNGSN 248

Query: 1182 PAVWTEAETLLLLESVLKHGDDWDLVAKSVETKSKLECISKLMQLPFGDLMLGAGYRKGR 1003
             AVWTE ETL LLESV +HG+DWDLVA++V+TK+KL+CISKL++LPFGDL+L + Y KG 
Sbjct: 249  AAVWTEEETLRLLESVSRHGNDWDLVAQNVKTKTKLDCISKLIELPFGDLILSSTYGKGN 308

Query: 1002 YLDVIGDVSNSKIVGSASNESQEPMKADDSITE-LQKDQQNGDAKSEGPPLK-RACTRAS 829
                IG  +NSK V +A +E Q+  K +D + E +  +++ GD   +GP LK R  T  S
Sbjct: 309  SSGQIGSTNNSKQVPAAPSEHQDDTKHEDQLHEQMNANEEKGDVMDDGPLLKRRRITSVS 368

Query: 828  DAGSSLMKQVNRISTMLGPQVTASAADAAITSLCYENQCSKELFXXXXXDYVDSKASPEA 649
            DAG SLMKQV  ISTM+GP +TA+AA+AA+ +LC E  C +E+F        +  +SP  
Sbjct: 369  DAGGSLMKQVALISTMVGPDITAAAAEAAVAALCDETACPREIFDGEEDFPSNGFSSPSF 428

Query: 648  SNQMRDAD-VDNAVEDKSPNQS---GLSSVKSIIPXXXXXXXXXXXXXXXXXXXXXXXAD 481
             ++ +  D VD +   ++P QS     S+ ++ IP                       AD
Sbjct: 429  HSKSKRVDEVDASEVKQTPTQSVNEEASAWQNDIPLSLRLRAAVATTLGAAAAHAKLLAD 488

Query: 480  KEEREMGHLVANMIEAQVKKLQHKLKYFDDLEVIMEKEDAQLEQLEETLVAERLNVLQRI 301
            +E+RE+ +L+A ++E Q+KKL HK+K+FDDLE+IMEKE A+L++L E+L  ER++VLQR 
Sbjct: 489  QEDREVENLMATIVETQLKKLHHKIKHFDDLELIMEKEYAELDELTESLTEERIDVLQRA 548

Query: 300  FSAAISKSKEHTPL 259
              A ISKS++H P+
Sbjct: 549  IRAGISKSRDHAPI 562


>ref|XP_002280389.1| PREDICTED: SWI/SNF complex subunit SWI3A [Vitis vinifera]
            gi|297734457|emb|CBI15704.3| unnamed protein product
            [Vitis vinifera]
          Length = 563

 Score =  295 bits (756), Expect = 1e-77
 Identities = 167/370 (45%), Positives = 246/370 (66%), Gaps = 11/370 (2%)
 Frame = -3

Query: 1347 EKKCLVCGSCKESCDSAYYEYMKEERFILCEKCFKSGKY-EDKSAEDFKLKDTVD----Q 1183
            ++K LVCG+C ++CDS +Y  +K    ++C KCFK+G Y E++S +DFK  D  +    +
Sbjct: 186  KEKGLVCGNCGDNCDSGHYNCLKGSP-VICVKCFKNGNYGENRSVDDFKFNDCNENRGNR 244

Query: 1182 PAVWTEAETLLLLESVLKHGDDWDLVAKSVETKSKLECISKLMQLPFGDLMLGAGYRKGR 1003
             AVWTEAETLLLLESVLKHGDDW+LV ++V+TK+KL+CISKL++LPFG+LMLG+   K R
Sbjct: 245  GAVWTEAETLLLLESVLKHGDDWELVVQNVQTKTKLDCISKLIELPFGELMLGSSLGKSR 304

Query: 1002 YLDVIGDVSNSKIVGSASNESQEPMK-ADDSITELQKDQQNGDAKSEGPPLKRAC-TRAS 829
                  D ++S      S ESQE +K       ++ + +QNGDA+++GPPLKR C T  S
Sbjct: 305  ---ASNDNTSSIKPVQTSLESQENIKNGGQGDEQINESEQNGDAENQGPPLKRKCITSLS 361

Query: 828  DAGSSLMKQVNRISTMLGPQVTASAADAAITSLCYENQCSKELFXXXXXDYVDSKASPEA 649
            DAG SLM+QV  ISTM+GP ++A+AADAA+ +LC EN C K++F     +  +   SP  
Sbjct: 362  DAGISLMRQVAVISTMVGPHISAAAADAAVAALCDENPCVKDIFDGAEDNVTEELGSPIR 421

Query: 648  SNQM-RDADVDNAVEDKSPNQSGL---SSVKSIIPXXXXXXXXXXXXXXXXXXXXXXXAD 481
            +N++ R   V+++  ++ P  S +   SS K+ IP                       AD
Sbjct: 422  NNKLERSLMVEDSEINERPILSEIQKTSSEKNAIPLPLQMRAAIATALGAAAANAKSLAD 481

Query: 480  KEEREMGHLVANMIEAQVKKLQHKLKYFDDLEVIMEKEDAQLEQLEETLVAERLNVLQRI 301
            +E RE+ HLVA +IE Q+KKL  K+++F+DLE+IMEKE   L++L+E+++AER+++LQR+
Sbjct: 482  QEHREIEHLVATIIETQMKKLHCKIQHFEDLELIMEKEYTHLKELKESIIAERIDILQRV 541

Query: 300  FSAAISKSKE 271
            F+A IS+ ++
Sbjct: 542  FNAGISRWRD 551


>emb|CAN80839.1| hypothetical protein VITISV_043833 [Vitis vinifera]
          Length = 563

 Score =  293 bits (751), Expect = 5e-77
 Identities = 167/370 (45%), Positives = 244/370 (65%), Gaps = 11/370 (2%)
 Frame = -3

Query: 1347 EKKCLVCGSCKESCDSAYYEYMKEERFILCEKCFKSGKY-EDKSAEDFKLKDTVD----Q 1183
            ++K LVCG+C ++CDS +Y  +K    ++C KCFK+G Y E++S +DFK  D  +    +
Sbjct: 186  KEKGLVCGNCGDNCDSGHYNCLKGSP-VICVKCFKNGNYGENRSVDDFKFNDCNENRGNR 244

Query: 1182 PAVWTEAETLLLLESVLKHGDDWDLVAKSVETKSKLECISKLMQLPFGDLMLGAGYRKGR 1003
             AVWTEAETLLLLESVLKHGDDW+LV ++V+TK+KL+CISKL++LPFG+LMLG+   K R
Sbjct: 245  GAVWTEAETLLLLESVLKHGDDWELVVQNVQTKTKLDCISKLIELPFGELMLGSSLGKSR 304

Query: 1002 YLDVIGDVSNSKIVGSASNESQEPMK-ADDSITELQKDQQNGDAKSEGPPLKRAC-TRAS 829
                  D ++S      S ESQE +K       ++ + +QNGDA+++GPPLKR C T  S
Sbjct: 305  ---ASNDNTSSIKPVQTSLESQENIKNGGQGDEQINESEQNGDAENQGPPLKRKCITSLS 361

Query: 828  DAGSSLMKQVNRISTMLGPQVTASAADAAITSLCYENQCSKELFXXXXXDYVDSKASPEA 649
            DAG SLM QV  ISTM+GP ++A+AADAA+ +LC EN C K++F     +  +   SP  
Sbjct: 362  DAGISLMXQVAVISTMVGPHISAAAADAAVAALCDENPCVKDIFDGAEDNVTEELGSPIR 421

Query: 648  SNQM-RDADVDNAVEDKSPNQSGL---SSVKSIIPXXXXXXXXXXXXXXXXXXXXXXXAD 481
            +N + R   V+++  ++ P  S +   SS K+ IP                       AD
Sbjct: 422  NNXLERSLMVEDSEINERPILSEIQKTSSEKNAIPLPLQMRAAIATALGAAAANAKSLAD 481

Query: 480  KEEREMGHLVANMIEAQVKKLQHKLKYFDDLEVIMEKEDAQLEQLEETLVAERLNVLQRI 301
            +E RE+ HLVA +IE Q+KKL  K+++F+DLE+IMEKE   L++L+E+++AER+++LQR+
Sbjct: 482  QEHREIEHLVATIIETQMKKLHCKIQHFEDLELIMEKEYTHLKELKESIIAERIDILQRV 541

Query: 300  FSAAISKSKE 271
            F+A IS+ ++
Sbjct: 542  FNAGISRWRD 551


>ref|XP_003602787.1| SWI/SNF complex subunit SMARCC2 [Medicago truncatula]
            gi|355491835|gb|AES73038.1| SWI/SNF complex subunit
            SMARCC2 [Medicago truncatula]
          Length = 540

 Score =  276 bits (705), Expect = 1e-71
 Identities = 160/368 (43%), Positives = 229/368 (62%), Gaps = 6/368 (1%)
 Frame = -3

Query: 1344 KKCLVCGSCKESCDSAYYEYMKEERFILCEKCFKSGKY-EDKSAEDFKLKDT----VDQP 1180
            +K + CG+C + C S +Y   K+  FI+C KCFK+G Y E +S EDFKL ++     +  
Sbjct: 186  RKEVNCGNCGDKCGSGHYRSTKDN-FIICTKCFKNGNYGEKRSMEDFKLNESSEISANHS 244

Query: 1179 AVWTEAETLLLLESVLKHGDDWDLVAKSVETKSKLECISKLMQLPFGDLMLGAGYRKGRY 1000
            AVWTE ETLLLLESVLKHGDDW+LVA+SV TK+KLECISKL++LPFG+LML +  R    
Sbjct: 245  AVWTEGETLLLLESVLKHGDDWELVAQSVRTKTKLECISKLIELPFGELMLASVRRNDNS 304

Query: 999  LDVIGDVSNSKIVGSASNESQEPMKADDSITELQKD-QQNGDAKSEGPPLKRACTRASDA 823
              V G V+N   V  +S++ QE     D  +E + + +QNGDA +E P  +R  +  SD+
Sbjct: 305  NSVTGIVNNRNQVQVSSSDHQETSMTQDQSSEPKNEVEQNGDAVNENPSKRRRVSTLSDS 364

Query: 822  GSSLMKQVNRISTMLGPQVTASAADAAITSLCYENQCSKELFXXXXXDYVDSKASPEASN 643
             SSLMKQV  +ST++ P VTA+AA AAIT+LC EN   +++F               AS 
Sbjct: 365  SSSLMKQVGLLSTVVDPHVTAAAASAAITALCDENSLPRDIF---------DVEEDNASA 415

Query: 642  QMRDADVDNAVEDKSPNQSGLSSVKSIIPXXXXXXXXXXXXXXXXXXXXXXXADKEEREM 463
            +  +A+    VE      S  S VK  IP                       AD+E+RE+
Sbjct: 416  RALEAEGLEMVEG-----STQSEVKDDIPLTLRIRAAIGTALGATAARAKLLADQEDREI 470

Query: 462  GHLVANMIEAQVKKLQHKLKYFDDLEVIMEKEDAQLEQLEETLVAERLNVLQRIFSAAIS 283
             HLVA +IEAQV+KLQ K+K+FD+LE++MEKE A++E+L+++++ ER++VL++ F + ++
Sbjct: 471  EHLVATIIEAQVEKLQQKVKHFDELELLMEKEHAEMEELKDSILTERIDVLRKTFKSGVA 530

Query: 282  KSKEHTPL 259
            + K +  L
Sbjct: 531  RWKHYPSL 538


>ref|XP_003527961.1| PREDICTED: SWI/SNF complex subunit SWI3A-like [Glycine max]
          Length = 522

 Score =  265 bits (677), Expect = 2e-68
 Identities = 152/361 (42%), Positives = 219/361 (60%), Gaps = 6/361 (1%)
 Frame = -3

Query: 1329 CGSCKESCDSAYYEYMKEERFILCEKCFKSGKY-EDKSAEDFKLKDTVDQPA----VWTE 1165
            CG C   C S +Y    ++ FI+C  CFKSG Y E +S EDF L ++ +       VWTE
Sbjct: 187  CGLCGHKCGSGHYR-CTQDNFIICINCFKSGNYGEKRSTEDFVLSESSENSGKHDTVWTE 245

Query: 1164 AETLLLLESVLKHGDDWDLVAKSVETKSKLECISKLMQLPFGDLMLGAGYRKGRYLDVIG 985
            AETLLLLESVLKHGDDW+LVA+SV+TK+KL+CISKL++LPFG+LMLG  +R     D  G
Sbjct: 246  AETLLLLESVLKHGDDWELVAQSVQTKTKLDCISKLIELPFGELMLGPAHRNVNINDANG 305

Query: 984  DVSNSKIVGSASNESQEPMKADDSITEL-QKDQQNGDAKSEGPPLKRACTRASDAGSSLM 808
             V+N+K V S+S+++QE  K  D   E   +++QNGDA  E P  ++     SD+ SSLM
Sbjct: 306  IVNNAKQVQSSSSDNQEISKTKDQSPEFTNENEQNGDAVKESPSKRQRVASLSDSSSSLM 365

Query: 807  KQVNRISTMLGPQVTASAADAAITSLCYENQCSKELFXXXXXDYVDSKASPEASNQMRDA 628
             QV  IS ++ P +TA+AADAA+++LC E+ C +E+F                       
Sbjct: 366  NQVGLISNVVDPHITAAAADAAVSALCDEDLCPREIF----------------------- 402

Query: 627  DVDNAVEDKSPNQSGLSSVKSIIPXXXXXXXXXXXXXXXXXXXXXXXADKEEREMGHLVA 448
            DVD   E     +S LS     IP                       AD+E+RE+ HLVA
Sbjct: 403  DVDGE-EGLEMERSSLSE----IPLTLRVRAATATALGAAAARAKLLADQEDREIEHLVA 457

Query: 447  NMIEAQVKKLQHKLKYFDDLEVIMEKEDAQLEQLEETLVAERLNVLQRIFSAAISKSKEH 268
             +IEAQ+ K+  K+K+FDDLE++MEKE A++E  +++++ ER++VL+R F + +++ K++
Sbjct: 458  TIIEAQIDKMLQKVKHFDDLELLMEKEHAEMENKKDSILTERIDVLRRTFRSGVTRWKDY 517

Query: 267  T 265
            +
Sbjct: 518  S 518


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