BLASTX nr result

ID: Scutellaria24_contig00015132 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00015132
         (425 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002297976.1| inner membrane protein [Populus trichocarpa]...    57   2e-06
ref|XP_002880242.1| hypothetical protein ARALYDRAFT_483801 [Arab...    56   3e-06

>ref|XP_002297976.1| inner membrane protein [Populus trichocarpa]
           gi|222845234|gb|EEE82781.1| inner membrane protein
           [Populus trichocarpa]
          Length = 459

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 47/143 (32%), Positives = 67/143 (46%), Gaps = 8/143 (5%)
 Frame = -3

Query: 405 QQRVAPSISHINRDDSDREELHTKSIPRNPEICSYIKNRFLGSGNN-FSNFHGSRNVFQD 229
           ++R   S S+I  DD DR+    +  P +  + +  + R  GS    F N       F +
Sbjct: 15  RRRYNASFSYILHDD-DRKHNSIEEGPSSKGMSNLFQQRSFGSSRKRFDNNLAVFGFFHN 73

Query: 228 RR---FAIQAGSGLFSARSFSSASVGEGAADNIEILNXXXXXXXXXXXXXXXV----LNE 70
           RR    ++    G+   R  S+     G ++NIE++N                    +NE
Sbjct: 74  RRCLDLSLSPSIGVSFCRDMSTIG---GGSENIELINDVADVLTDTTFEAVSAQAPVVNE 130

Query: 69  VAIAAADSYFHVAALQHLIDYVH 1
           VAIAAADSYF VAALQH+ID VH
Sbjct: 131 VAIAAADSYFPVAALQHVIDAVH 153


>ref|XP_002880242.1| hypothetical protein ARALYDRAFT_483801 [Arabidopsis lyrata subsp.
           lyrata] gi|297326081|gb|EFH56501.1| hypothetical protein
           ARALYDRAFT_483801 [Arabidopsis lyrata subsp. lyrata]
          Length = 434

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 50/141 (35%), Positives = 62/141 (43%), Gaps = 6/141 (4%)
 Frame = -3

Query: 405 QQRVAPSISHINRDDSDREELHTKSIPRNPEICSYIKNRFLGSGNNFSNFHGSRNVFQDR 226
           Q+RV PS  H+ RDD D     TKS   N    + I+     +G +  +       +Q  
Sbjct: 16  QRRVYPSCGHLIRDDRDE----TKSDSSNSH--TMIRKVLASNGTSKLSSMSLERHYQSF 69

Query: 225 RFAIQAGSGLFSARSFSSASVG-EGAADNI-----EILNXXXXXXXXXXXXXXXVLNEVA 64
            F+   G GL S R  SS         D I     E++                 +NEVA
Sbjct: 70  SFSGPLGLGLSSCRYMSSTPPEWSDKVDGIDFVATEVVPDEIIEAVTTTSQAVPAINEVA 129

Query: 63  IAAADSYFHVAALQHLIDYVH 1
           IAAADS F VAALQHLID VH
Sbjct: 130 IAAADSAFPVAALQHLIDGVH 150


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