BLASTX nr result
ID: Scutellaria24_contig00015065
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Scutellaria24_contig00015065
(797 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|YP_004935710.1| ycf2 gene product (chloroplast) [Sesamum ind... 411 e-112
ref|YP_007353958.1| Ycf2 protein (chloroplast) [Tectona grandis]... 409 e-112
ref|YP_398908.1| Ycf2 [Nicotiana tomentosiformis] gi|81301647|re... 403 e-110
ref|NP_054542.1| Ycf2 [Nicotiana tabacum] gi|11466033|ref|NP_054... 403 e-110
prf||1211235CA ORF 1708 403 e-110
>ref|YP_004935710.1| ycf2 gene product (chloroplast) [Sesamum indicum]
gi|359422324|ref|YP_004935729.1| ycf2 gene product
(chloroplast) [Sesamum indicum]
gi|347448339|gb|AEO92750.1| ycf2 (chloroplast) [Sesamum
indicum] gi|347448358|gb|AEO92769.1| ycf2 (chloroplast)
[Sesamum indicum]
Length = 2097
Score = 411 bits (1056), Expect = e-112
Identities = 205/244 (84%), Positives = 206/244 (84%), Gaps = 3/244 (1%)
Frame = +1
Query: 73 RTLMKYMINQHLSNLKKSQKKWFDPLILISRTERSMNRDPDAYRYKWSNGSKNFQEH--- 243
RT+MKY INQHLSNLKKSQKKWFDPLILISRTERSMNRDPDAYRYKWSNGSKNFQEH
Sbjct: 569 RTIMKYTINQHLSNLKKSQKKWFDPLILISRTERSMNRDPDAYRYKWSNGSKNFQEHLEH 628
Query: 244 FVSEQKSRFQIVFDRLRINQYSIDWSEVIDKKDXXXXXXXXXXXXXXXXXXXXXXXXXXX 423
FVSEQKSRFQIVFDRLRINQYSIDWSEVIDKKD
Sbjct: 629 FVSEQKSRFQIVFDRLRINQYSIDWSEVIDKKDLSKPLRFFLSKSLLFLFKLLFFLSNSL 688
Query: 424 XXXCVSFGNIPIHRSEIYIYELKGPNDQLCNQLLESIGLQIVHLKKWKPFLLDDHDTSRK 603
CVSFGNIPIHRSEIYI ELKGPNDQLCNQLLESIGLQIVHLKKWKPFLLDDHDTSRK
Sbjct: 689 PFFCVSFGNIPIHRSEIYISELKGPNDQLCNQLLESIGLQIVHLKKWKPFLLDDHDTSRK 748
Query: 604 SKLLINGGTPLLFNKIPKWMIDSFHTRNNRRKSFDNADSYFSMIFHNQDNWLNPVKPFHR 783
SK LINGGTP LFNKIPK MIDSFHTRNNRRKSFDNADSYFSMIFHNQDNWLNPVKPFHR
Sbjct: 749 SKFLINGGTPFLFNKIPKRMIDSFHTRNNRRKSFDNADSYFSMIFHNQDNWLNPVKPFHR 808
Query: 784 SSLI 795
SSLI
Sbjct: 809 SSLI 812
>ref|YP_007353958.1| Ycf2 protein (chloroplast) [Tectona grandis]
gi|442743025|ref|YP_007353977.1| Ycf2 protein
(chloroplast) [Tectona grandis]
gi|438687647|emb|CCP47174.1| YCF2 protein (chloroplast)
[Tectona grandis] gi|438687666|emb|CCP47196.1| ycf2
protein (chloroplast) [Tectona grandis]
gi|438688331|emb|CCP47263.1| YCF2 protein (chloroplast)
[Tectona grandis] gi|438688350|emb|CCP47285.1| ycf2
protein (chloroplast) [Tectona grandis]
gi|438688455|emb|CCP47352.1| YCF2 protein (chloroplast)
[Tectona grandis] gi|438688474|emb|CCP47374.1| ycf2
protein (chloroplast) [Tectona grandis]
Length = 2287
Score = 409 bits (1051), Expect = e-112
Identities = 204/244 (83%), Positives = 206/244 (84%), Gaps = 3/244 (1%)
Frame = +1
Query: 73 RTLMKYMINQHLSNLKKSQKKWFDPLILISRTERSMNRDPDAYRYKWSNGSKNFQEH--- 243
RT+MKY INQHLSNLKKSQKKWFDPLILISRTERSMNRDPDAYRYKWSNGSKNFQEH
Sbjct: 769 RTIMKYTINQHLSNLKKSQKKWFDPLILISRTERSMNRDPDAYRYKWSNGSKNFQEHLEH 828
Query: 244 FVSEQKSRFQIVFDRLRINQYSIDWSEVIDKKDXXXXXXXXXXXXXXXXXXXXXXXXXXX 423
FVSEQKS QIVFD+LRINQYSIDWSEVIDKKD
Sbjct: 829 FVSEQKS--QIVFDQLRINQYSIDWSEVIDKKDLSKPLRFFLSKSLLFLSKLLFFLSNSL 886
Query: 424 XXXCVSFGNIPIHRSEIYIYELKGPNDQLCNQLLESIGLQIVHLKKWKPFLLDDHDTSRK 603
CVSFGNIPIHRSEIYIYELKGPNDQLCNQLLESIGLQIVHLKKWKPFLLDDHDTSRK
Sbjct: 887 PFFCVSFGNIPIHRSEIYIYELKGPNDQLCNQLLESIGLQIVHLKKWKPFLLDDHDTSRK 946
Query: 604 SKLLINGGTPLLFNKIPKWMIDSFHTRNNRRKSFDNADSYFSMIFHNQDNWLNPVKPFHR 783
SK LINGGTP LFNKIPKWMIDSFHTRNNRRKSFDNADSYFSMIFHNQDNWLNPVKPFHR
Sbjct: 947 SKFLINGGTPFLFNKIPKWMIDSFHTRNNRRKSFDNADSYFSMIFHNQDNWLNPVKPFHR 1006
Query: 784 SSLI 795
SSLI
Sbjct: 1007 SSLI 1010
>ref|YP_398908.1| Ycf2 [Nicotiana tomentosiformis] gi|81301647|ref|YP_398942.1| Ycf2
[Nicotiana tomentosiformis]
gi|109896303|sp|Q33BV3.1|YCF2_NICTO RecName: Full=Protein
ycf2 gi|80750971|dbj|BAE48047.1| Ycf2 protein [Nicotiana
tomentosiformis] gi|80751006|dbj|BAE48082.1| Ycf2 protein
[Nicotiana tomentosiformis]
Length = 2280
Score = 403 bits (1035), Expect = e-110
Identities = 200/246 (81%), Positives = 206/246 (83%), Gaps = 5/246 (2%)
Frame = +1
Query: 73 RTLMKYMINQHLSNLKKSQKKWFDPLILISRTERSMNRDPDAYRYKWSNGSKNFQEHF-- 246
RT+MKY INQ+LSNLKKSQKKWF+PLILISRTERSMNRDPDAYRYKWSNGSKNFQEH
Sbjct: 767 RTIMKYTINQYLSNLKKSQKKWFEPLILISRTERSMNRDPDAYRYKWSNGSKNFQEHLEQ 826
Query: 247 -VSEQKSRFQIVFDRLRINQYSIDWSEVIDKKDXXXXXXXXXXXXXXXXXXXXXXXXXXX 423
VSEQKSRFQ+VFDRLRINQYSIDWSEVIDKKD
Sbjct: 827 SVSEQKSRFQVVFDRLRINQYSIDWSEVIDKKDLSKPLRFFLSKSLLFLSKLLFFLSNSL 886
Query: 424 XXXCVSFGNIPIHRSEIYIYELKGPNDQLCNQLLESIGLQIVHLKKWKPFLLDDHDTSRK 603
CVSFGNIPIHRSEIYIYELKGPNDQLCNQLLESIGLQIVHLKKWKPFLLDDHDTS+K
Sbjct: 887 PFFCVSFGNIPIHRSEIYIYELKGPNDQLCNQLLESIGLQIVHLKKWKPFLLDDHDTSQK 946
Query: 604 SKLLINGGT--PLLFNKIPKWMIDSFHTRNNRRKSFDNADSYFSMIFHNQDNWLNPVKPF 777
SK LINGGT P LFNKIPKWMIDSFHTRNNRRKSFDN DSYFSMIFH+QDNWLNPVKPF
Sbjct: 947 SKFLINGGTISPFLFNKIPKWMIDSFHTRNNRRKSFDNPDSYFSMIFHDQDNWLNPVKPF 1006
Query: 778 HRSSLI 795
HRSSLI
Sbjct: 1007 HRSSLI 1012
>ref|NP_054542.1| Ycf2 [Nicotiana tabacum] gi|11466033|ref|NP_054575.1| Ycf2 [Nicotiana
tabacum] gi|78102582|ref|YP_358722.1| Ycf2 [Nicotiana
sylvestris] gi|78102617|ref|YP_358756.1| Ycf2 [Nicotiana
sylvestris] gi|3915961|sp|P09976.2|YCF2_TOBAC RecName:
Full=Protein ycf2 gi|109896302|sp|Q3C1N4.1|YCF2_NICSY
RecName: Full=Protein ycf2 gi|2924274|emb|CAA77427.1|
Ycf2 protein [Nicotiana tabacum]
gi|2924285|emb|CAA77438.1| Ycf2 protein [Nicotiana
tabacum] gi|77799609|dbj|BAE46698.1| Ycf2 protein
[Nicotiana sylvestris] gi|77799644|dbj|BAE46733.1| Ycf2
protein [Nicotiana sylvestris]
Length = 2280
Score = 403 bits (1035), Expect = e-110
Identities = 200/246 (81%), Positives = 206/246 (83%), Gaps = 5/246 (2%)
Frame = +1
Query: 73 RTLMKYMINQHLSNLKKSQKKWFDPLILISRTERSMNRDPDAYRYKWSNGSKNFQEHF-- 246
RT+MKY INQ+LSNLKKSQKKWF+PLILISRTERSMNRDPDAYRYKWSNGSKNFQEH
Sbjct: 767 RTIMKYTINQYLSNLKKSQKKWFEPLILISRTERSMNRDPDAYRYKWSNGSKNFQEHLEQ 826
Query: 247 -VSEQKSRFQIVFDRLRINQYSIDWSEVIDKKDXXXXXXXXXXXXXXXXXXXXXXXXXXX 423
VSEQKSRFQ+VFDRLRINQYSIDWSEVIDKKD
Sbjct: 827 SVSEQKSRFQVVFDRLRINQYSIDWSEVIDKKDLSKPLRFFLSKSLLFLSKLLFFLSNSL 886
Query: 424 XXXCVSFGNIPIHRSEIYIYELKGPNDQLCNQLLESIGLQIVHLKKWKPFLLDDHDTSRK 603
CVSFGNIPIHRSEIYIYELKGPNDQLCNQLLESIGLQIVHLKKWKPFLLDDHDTS+K
Sbjct: 887 PFFCVSFGNIPIHRSEIYIYELKGPNDQLCNQLLESIGLQIVHLKKWKPFLLDDHDTSQK 946
Query: 604 SKLLINGGT--PLLFNKIPKWMIDSFHTRNNRRKSFDNADSYFSMIFHNQDNWLNPVKPF 777
SK LINGGT P LFNKIPKWMIDSFHTRNNRRKSFDN DSYFSMIFH+QDNWLNPVKPF
Sbjct: 947 SKFLINGGTISPFLFNKIPKWMIDSFHTRNNRRKSFDNPDSYFSMIFHDQDNWLNPVKPF 1006
Query: 778 HRSSLI 795
HRSSLI
Sbjct: 1007 HRSSLI 1012
>prf||1211235CA ORF 1708
Length = 1000
Score = 403 bits (1035), Expect = e-110
Identities = 200/246 (81%), Positives = 206/246 (83%), Gaps = 5/246 (2%)
Frame = +1
Query: 73 RTLMKYMINQHLSNLKKSQKKWFDPLILISRTERSMNRDPDAYRYKWSNGSKNFQEHF-- 246
RT+MKY INQ+LSNLKKSQKKWF+PLILISRTERSMNRDPDAYRYKWSNGSKNFQEH
Sbjct: 195 RTIMKYTINQYLSNLKKSQKKWFEPLILISRTERSMNRDPDAYRYKWSNGSKNFQEHLEQ 254
Query: 247 -VSEQKSRFQIVFDRLRINQYSIDWSEVIDKKDXXXXXXXXXXXXXXXXXXXXXXXXXXX 423
VSEQKSRFQ+VFDRLRINQYSIDWSEVIDKKD
Sbjct: 255 SVSEQKSRFQVVFDRLRINQYSIDWSEVIDKKDLSKPLRFFLSKSLLFLSKLLFFLSNSL 314
Query: 424 XXXCVSFGNIPIHRSEIYIYELKGPNDQLCNQLLESIGLQIVHLKKWKPFLLDDHDTSRK 603
CVSFGNIPIHRSEIYIYELKGPNDQLCNQLLESIGLQIVHLKKWKPFLLDDHDTS+K
Sbjct: 315 PFFCVSFGNIPIHRSEIYIYELKGPNDQLCNQLLESIGLQIVHLKKWKPFLLDDHDTSQK 374
Query: 604 SKLLINGGT--PLLFNKIPKWMIDSFHTRNNRRKSFDNADSYFSMIFHNQDNWLNPVKPF 777
SK LINGGT P LFNKIPKWMIDSFHTRNNRRKSFDN DSYFSMIFH+QDNWLNPVKPF
Sbjct: 375 SKFLINGGTISPFLFNKIPKWMIDSFHTRNNRRKSFDNPDSYFSMIFHDQDNWLNPVKPF 434
Query: 778 HRSSLI 795
HRSSLI
Sbjct: 435 HRSSLI 440