BLASTX nr result

ID: Scutellaria24_contig00015009 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00015009
         (372 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002322794.1| predicted protein [Populus trichocarpa] gi|2...   110   1e-22
ref|XP_002532541.1| conserved hypothetical protein [Ricinus comm...   106   2e-21
emb|CAN79940.1| hypothetical protein VITISV_027779 [Vitis vinifera]   105   4e-21
ref|XP_002270691.1| PREDICTED: uncharacterized protein LOC100246...   105   5e-21
ref|NP_196251.1| late embryogenesis abundant hydroxyproline-rich...    99   6e-21

>ref|XP_002322794.1| predicted protein [Populus trichocarpa] gi|222867424|gb|EEF04555.1|
           predicted protein [Populus trichocarpa]
          Length = 209

 Score =  110 bits (275), Expect = 1e-22
 Identities = 59/123 (47%), Positives = 78/123 (63%), Gaps = 2/123 (1%)
 Frame = +1

Query: 7   MTAKDCGHHDGHR--KVYRRXXXXXXXXXXXXXXXXXXXXXXXRPAKPHFVLQDATVYAF 180
           M++KDCG H GHR  K++RR                       RP+KP F+LQDATVYAF
Sbjct: 1   MSSKDCGSH-GHRRRKIFRRIFAGILIFLLIVLIIILLVWAILRPSKPKFILQDATVYAF 59

Query: 181 NLSAAGNLLTTTLQITVNSRNPNSRIGVYYDKLDVYATYHSQQITLLHRHPAGVPGPQGH 360
           N+S+  N+LT+  Q+T++SRNPN ++G+YYDKLDVYATY +QQITL    P      QGH
Sbjct: 60  NVSSP-NVLTSNFQVTLSSRNPNDKVGIYYDKLDVYATYRNQQITLRTSIPTSY---QGH 115

Query: 361 QRL 369
           + +
Sbjct: 116 KEI 118


>ref|XP_002532541.1| conserved hypothetical protein [Ricinus communis]
           gi|223527730|gb|EEF29835.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 209

 Score =  106 bits (264), Expect = 2e-21
 Identities = 59/123 (47%), Positives = 74/123 (60%), Gaps = 2/123 (1%)
 Frame = +1

Query: 7   MTAKDCGHHDGH--RKVYRRXXXXXXXXXXXXXXXXXXXXXXXRPAKPHFVLQDATVYAF 180
           M+AKDCG+H GH  RK++RR                       RP+KP FVLQD TV+AF
Sbjct: 1   MSAKDCGNH-GHKRRKLFRRIFAGILIFLFLVLVTILIVWAVLRPSKPKFVLQDVTVFAF 59

Query: 181 NLSAAGNLLTTTLQITVNSRNPNSRIGVYYDKLDVYATYHSQQITLLHRHPAGVPGPQGH 360
           N S   N LT+  QIT ++RNPN ++G+YYDKLDVYATY +QQITL    P      QGH
Sbjct: 60  NASTP-NYLTSNFQITFSTRNPNDKVGIYYDKLDVYATYRNQQITLRSAIPTNY---QGH 115

Query: 361 QRL 369
           + +
Sbjct: 116 EEI 118


>emb|CAN79940.1| hypothetical protein VITISV_027779 [Vitis vinifera]
          Length = 208

 Score =  105 bits (262), Expect = 4e-21
 Identities = 58/123 (47%), Positives = 73/123 (59%), Gaps = 1/123 (0%)
 Frame = +1

Query: 7   MTAKDCGHHDGHRKVYRRXXXXXXXXXXXXXXXXXXXXXXXRPAKPHFVLQDATVYAFNL 186
           M+ KDC + +  RK+ RR                       RP+KPHFVLQD TV A N 
Sbjct: 1   MSLKDCEYQEERRKLKRRIFCSVLAFIFLVLFVIFLIYVILRPSKPHFVLQDVTVLALNT 60

Query: 187 SAAGNLLTTTLQITVNSRNPNSRIGVYYDKLDVYATYHSQQITLLHRHPAGVPGP-QGHQ 363
           S+A   LTT +Q+TV SRNPN RIGVYY+ LD++ATY SQQITL    PA +P   QGH+
Sbjct: 61  SSAPGFLTTNIQVTVFSRNPNGRIGVYYENLDIFATYRSQQITL----PALLPTTYQGHK 116

Query: 364 RLV 372
            ++
Sbjct: 117 DVI 119


>ref|XP_002270691.1| PREDICTED: uncharacterized protein LOC100246840 [Vitis vinifera]
           gi|296084854|emb|CBI28263.3| unnamed protein product
           [Vitis vinifera]
          Length = 208

 Score =  105 bits (261), Expect = 5e-21
 Identities = 58/123 (47%), Positives = 73/123 (59%), Gaps = 1/123 (0%)
 Frame = +1

Query: 7   MTAKDCGHHDGHRKVYRRXXXXXXXXXXXXXXXXXXXXXXXRPAKPHFVLQDATVYAFNL 186
           M+ KDC + +  RK+ RR                       RP+KPHFVLQD TV A N 
Sbjct: 1   MSLKDCEYQEERRKLKRRIFCSVLAFIFLVLFVIFLIYVILRPSKPHFVLQDVTVLALNT 60

Query: 187 SAAGNLLTTTLQITVNSRNPNSRIGVYYDKLDVYATYHSQQITLLHRHPAGVPGP-QGHQ 363
           S+A   LTT +Q+TV SRNPN RIGVYY+ LD++ATY SQQITL    PA +P   QGH+
Sbjct: 61  SSAPGFLTTNVQVTVFSRNPNGRIGVYYENLDIFATYRSQQITL----PALLPTTYQGHK 116

Query: 364 RLV 372
            ++
Sbjct: 117 DVI 119


>ref|NP_196251.1| late embryogenesis abundant hydroxyproline-rich glycoprotein
           [Arabidopsis thaliana] gi|9758413|dbj|BAB08955.1|
           harpin-induced protein-like [Arabidopsis thaliana]
           gi|38603936|gb|AAR24713.1| At5g06330 [Arabidopsis
           thaliana] gi|44681420|gb|AAS47650.1| At5g06330
           [Arabidopsis thaliana] gi|332003620|gb|AED91003.1| late
           embryogenesis abundant hydroxyproline-rich glycoprotein
           [Arabidopsis thaliana]
          Length = 207

 Score = 99.0 bits (245), Expect(2) = 6e-21
 Identities = 52/106 (49%), Positives = 65/106 (61%), Gaps = 2/106 (1%)
 Frame = +1

Query: 7   MTAKDCGHHDGHRKVYRRXXXXXXXXXXXXXXXXXXXXXXX-RPAKPHFVLQDATVYAFN 183
           MT+KDCG HD H    R+                        +P+KP FVLQDATV+ FN
Sbjct: 1   MTSKDCGSHDSHSSCNRKIVIWTISIILLLILVVILLVWAILQPSKPRFVLQDATVFNFN 60

Query: 184 LSA-AGNLLTTTLQITVNSRNPNSRIGVYYDKLDVYATYHSQQITL 318
           +S    NLLT+  Q T++SRNPN +IG+YYD+LDVYA+Y SQQITL
Sbjct: 61  VSGNPPNLLTSNFQFTLSSRNPNDKIGIYYDRLDVYASYRSQQITL 106



 Score = 26.6 bits (57), Expect(2) = 6e-21
 Identities = 8/10 (80%), Positives = 10/10 (100%)
 Frame = +2

Query: 341 YQGHKDINVW 370
           YQGHK++NVW
Sbjct: 114 YQGHKEVNVW 123


Top