BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00015000
         (1459 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272750.1| PREDICTED: multisubstrate pseudouridine synt...   448   e-123
ref|XP_002512230.1| tRNA pseudouridine synthase d, putative [Ric...   437   e-120
emb|CBI34194.3| unnamed protein product [Vitis vinifera]              436   e-119
ref|XP_004142573.1| PREDICTED: putative pseudouridine synthase C...   434   e-119
ref|NP_187133.3| pseudouridine synthase [Arabidopsis thaliana] g...   413   e-113

>ref|XP_002272750.1| PREDICTED: multisubstrate pseudouridine synthase 7-like [Vitis
            vinifera]
          Length = 694

 Score =  448 bits (1152), Expect = e-123
 Identities = 229/379 (60%), Positives = 271/379 (71%), Gaps = 11/379 (2%)
 Frame = -3

Query: 1418 RFGSSSIPTHLIGAALLRGEWKAAVGMILDPREGEKDVTRNTREYYKQSGDIEGTLRQLP 1239
            RFGS S+PTHLIGAALLRGEW+ AV +ILDPREGE+D  R  REYYK+S DIEGTLRQ P
Sbjct: 313  RFGSGSVPTHLIGAALLRGEWETAVSLILDPREGERDAIRKAREYYKESDDIEGTLRQFP 372

Query: 1238 RYLVAERAILQCFQKCPGNYLQALLAIPRTLRMMFVHSYQSYLWNHAASMRVQKYGCHQV 1059
            R+LVAERAILQC +K PGNYLQAL AIPRTLRMM+VHSYQSYLWNHAASMRVQ YG  QV
Sbjct: 373  RHLVAERAILQCLKKYPGNYLQALKAIPRTLRMMYVHSYQSYLWNHAASMRVQNYGTKQV 432

Query: 1058 VLGDLVYCTEQETDKEMTSSPLECVESNDIDTHDDCLLEDISVTDLPEVTNTSVKAISEE 879
            VLGDLVYC     +K       E  +    D  D    ++IS TDLPE  N  VKA+  E
Sbjct: 433  VLGDLVYCKGDNAEKVTRVVNSEFDDDGCSDAFDSSHFDEISETDLPEERNDPVKALDAE 492

Query: 878  DIAEEKFTIDDVVLPLPGSRISYPLNAIGKIYHDLAEKDGVSLTDSAHNSKEFSLTNMTG 699
            D+    +TIDDVVLPLPGSR  YP N I ++YHD A+KD +SLT+SAH+ KEFS+TNMTG
Sbjct: 493  DLLTGNYTIDDVVLPLPGSRAIYPTNDIAQVYHDFAKKDAISLTESAHSVKEFSITNMTG 552

Query: 698  AYRKVFQKPKDFEWELLNYTDINTPLAETDWDKIAKSQAATIVRDEDEKEQIKPQNG--C 525
             +R+VFQKP DFEWELL YT+ N PLAETDWDKI KS+ + I+  ED +   + +N   C
Sbjct: 553  GFRRVFQKPIDFEWELLTYTEGNIPLAETDWDKITKSKPSNIIGGEDSRNGNEKENSFQC 612

Query: 524  NTKTDKCDDEINLSAGTCDTKSTKDDDI---------RTEESQMALKLSFTLPSSCYATM 372
              +++  +  +NLS    +     +  +            E+Q ALKLSFTLP+SCYATM
Sbjct: 613  MKQSESFEHNVNLSTDNNEPNGVTEIGLPQVEPQFESGAPEAQRALKLSFTLPASCYATM 672

Query: 371  AIRELLKTSTSVAFHKALS 315
            AIRELLKTSTSVAF K L+
Sbjct: 673  AIRELLKTSTSVAFQKTLN 691


>ref|XP_002512230.1| tRNA pseudouridine synthase d, putative [Ricinus communis]
            gi|223548191|gb|EEF49682.1| tRNA pseudouridine synthase
            d, putative [Ricinus communis]
          Length = 753

 Score =  437 bits (1124), Expect = e-120
 Identities = 225/387 (58%), Positives = 290/387 (74%), Gaps = 19/387 (4%)
 Frame = -3

Query: 1418 RFGSSSIPTHLIGAALLRGEWKAAVGMILDPREGEKDVT-------RNTREYYKQSGDIE 1260
            RFGS S+PTHLIGAALLRGEWK AV MILDPREG+  +        R  REYYK+S DI+
Sbjct: 366  RFGSGSVPTHLIGAALLRGEWKYAVSMILDPREGDILLLVICFMWMRMAREYYKESDDID 425

Query: 1259 GTLRQLPRYLVAERAILQCFQKCPGNYLQALLAIPRTLRMMFVHSYQSYLWNHAASMRVQ 1080
            GTLRQLPRYL AERA+LQC +KCPGNYLQAL AIPRTLRMM+VHSYQSYLWNHAASMRVQ
Sbjct: 426  GTLRQLPRYLTAERAVLQCLKKCPGNYLQALKAIPRTLRMMYVHSYQSYLWNHAASMRVQ 485

Query: 1079 KYGCHQVVLGDLVYCTEQETDKEMTSSPLECVESNDIDTHDDCLLEDISVTDLPEVTNTS 900
            KYG  QVV+GDLVYC   +T++E+ S+   C + +  D +    L++ S TDL E  +T 
Sbjct: 486  KYGTDQVVVGDLVYCKGDDTEREIGSANSACEDDDCEDMYGCSNLDETSGTDLSERKDTL 545

Query: 899  VK---AISEEDIAEEKFTIDDVVLPLPGSRISYPLNAIGKIYHDLAEKDGVSLTDSAHNS 729
            VK   A++ ED++   +TI+DV+LP+PGSR+SYP N I K+YHDLAEKD ++L +S H++
Sbjct: 546  VKVEQAVNAEDLSTGNYTINDVILPMPGSRVSYPTNDIAKVYHDLAEKDAINLAESVHSA 605

Query: 728  KEFSLTNMTGAYRKVFQKPKDFEWELLNYTDINTPLAETDWDKIAKSQAATIVRDED-EK 552
            KEFS+T+MTG+YR+VFQKP DFEWE+L+YTD  TPLAETD +K+AK+++  + ++E+ +K
Sbjct: 606  KEFSITSMTGSYRRVFQKPMDFEWEILSYTDGTTPLAETDMEKLAKAKSIELNKEEETKK 665

Query: 551  EQIKPQNGCNTKTDKCDDEINLSA-----GTCDTKSTKDDDI---RTEESQMALKLSFTL 396
               K  + C  +     ++++LSA     G  + +  K + +    T  +Q ALKL+FTL
Sbjct: 666  NDTKSPSDCMRQPMSSGNDLHLSAEYNREGEREVEVAKVEPLYGPNTRGAQTALKLTFTL 725

Query: 395  PSSCYATMAIRELLKTSTSVAFHKALS 315
            P+SCYATMAIRELLKTSTSVAFHK L+
Sbjct: 726  PASCYATMAIRELLKTSTSVAFHKTLN 752


>emb|CBI34194.3| unnamed protein product [Vitis vinifera]
          Length = 693

 Score =  436 bits (1120), Expect = e-119
 Identities = 226/379 (59%), Positives = 270/379 (71%), Gaps = 11/379 (2%)
 Frame = -3

Query: 1418 RFGSSSIPTHLIGAALLRGEWKAAVGMILDPREGEKDVTRNTREYYKQSGDIEGTLRQLP 1239
            RFGS S+PTHLIGAALLRGEW+ AV +ILDPREG+  + +  REYYK+S DIEGTLRQ P
Sbjct: 313  RFGSGSVPTHLIGAALLRGEWETAVSLILDPREGDILLLK-AREYYKESDDIEGTLRQFP 371

Query: 1238 RYLVAERAILQCFQKCPGNYLQALLAIPRTLRMMFVHSYQSYLWNHAASMRVQKYGCHQV 1059
            R+LVAERAILQC +K PGNYLQAL AIPRTLRMM+VHSYQSYLWNHAASMRVQ YG  QV
Sbjct: 372  RHLVAERAILQCLKKYPGNYLQALKAIPRTLRMMYVHSYQSYLWNHAASMRVQNYGTKQV 431

Query: 1058 VLGDLVYCTEQETDKEMTSSPLECVESNDIDTHDDCLLEDISVTDLPEVTNTSVKAISEE 879
            VLGDLVYC     +K       E  +    D  D    ++IS TDLPE  N  VKA+  E
Sbjct: 432  VLGDLVYCKGDNAEKVTRVVNSEFDDDGCSDAFDSSHFDEISETDLPEERNDPVKALDAE 491

Query: 878  DIAEEKFTIDDVVLPLPGSRISYPLNAIGKIYHDLAEKDGVSLTDSAHNSKEFSLTNMTG 699
            D+    +TIDDVVLPLPGSR  YP N I ++YHD A+KD +SLT+SAH+ KEFS+TNMTG
Sbjct: 492  DLLTGNYTIDDVVLPLPGSRAIYPTNDIAQVYHDFAKKDAISLTESAHSVKEFSITNMTG 551

Query: 698  AYRKVFQKPKDFEWELLNYTDINTPLAETDWDKIAKSQAATIVRDEDEKEQIKPQNG--C 525
             +R+VFQKP DFEWELL YT+ N PLAETDWDKI KS+ + I+  ED +   + +N   C
Sbjct: 552  GFRRVFQKPIDFEWELLTYTEGNIPLAETDWDKITKSKPSNIIGGEDSRNGNEKENSFQC 611

Query: 524  NTKTDKCDDEINLSAGTCDTKSTKDDDI---------RTEESQMALKLSFTLPSSCYATM 372
              +++  +  +NLS    +     +  +            E+Q ALKLSFTLP+SCYATM
Sbjct: 612  MKQSESFEHNVNLSTDNNEPNGVTEIGLPQVEPQFESGAPEAQRALKLSFTLPASCYATM 671

Query: 371  AIRELLKTSTSVAFHKALS 315
            AIRELLKTSTSVAF K L+
Sbjct: 672  AIRELLKTSTSVAFQKTLN 690


>ref|XP_004142573.1| PREDICTED: putative pseudouridine synthase C1A4.09-like [Cucumis
            sativus]
          Length = 719

 Score =  434 bits (1117), Expect = e-119
 Identities = 221/373 (59%), Positives = 279/373 (74%), Gaps = 5/373 (1%)
 Frame = -3

Query: 1418 RFGSSSIPTHLIGAALLRGEWKAAVGMILDPREGEKDVTRNTREYYKQSGDIEGTLRQLP 1239
            RFGS S+PTHL+GA+LLRGEWK AV MILDPREG+  +    R+YYK+S DI+GTL+QLP
Sbjct: 352  RFGSGSVPTHLVGASLLRGEWKGAVNMILDPREGDILLLMRARDYYKESDDIDGTLKQLP 411

Query: 1238 RYLVAERAILQCFQKCPGNYLQALLAIPRTLRMMFVHSYQSYLWNHAASMRVQKYGCHQV 1059
            RYLVAERAILQC +KCPGNYLQAL AIPRTLRMM+VHSYQSYLWNHAASMRVQKYG  +V
Sbjct: 412  RYLVAERAILQCLKKCPGNYLQALKAIPRTLRMMYVHSYQSYLWNHAASMRVQKYGIDKV 471

Query: 1058 VLGDLVYCTEQ--ETDKEMTSSPLECVESNDIDTHDDCLLEDISVTDLPEVTNTSVKAIS 885
            V+GDLVYC E   ET     S   E  +  D +++D C LE++    LP   +  VKA++
Sbjct: 472  VVGDLVYCKENHTETAAVQNSEEYEDEDCGDANSYDSCHLEEVCKLGLPTERHKLVKAVT 531

Query: 884  EEDIAEEKFTIDDVVLPLPGSRISYPLNAIGKIYHDLAEKDGVSLTDSAHNSKEFSLTNM 705
              D+    FTIDDVVLPLPGSR+ YP N I ++Y+DLA KD +SLT+S HN KEFS+T+M
Sbjct: 532  AGDVLSGNFTIDDVVLPLPGSRVLYPTNDIAEVYNDLATKDSISLTNSVHNVKEFSITSM 591

Query: 704  TGAYRKVFQKPKDFEWELLNYTDINTPLAETDWDKIAKSQAATIVRDEDEKEQIKPQNGC 525
            TG+YR+VFQ+PKD+EWEL++Y D N PLA++D   + KSQ+  I ++E   ++ K ++  
Sbjct: 592  TGSYRRVFQRPKDYEWELISYVDRNLPLAQSDLHNLLKSQSVEISKEEKIADKSKNEDSL 651

Query: 524  NTKTDK---CDDEINLSAGTCDTKSTKDDDIRTEESQMALKLSFTLPSSCYATMAIRELL 354
            ++ TD+   C   I L AG  + ++ +     T++ QMALKLSFTLP+S YATMAIRELL
Sbjct: 652  DS-TDQSVCCKKNIQLEAGGKENENGQG----TQDPQMALKLSFTLPASSYATMAIRELL 706

Query: 353  KTSTSVAFHKALS 315
            KTSTSVAFHK L+
Sbjct: 707  KTSTSVAFHKTLN 719


>ref|NP_187133.3| pseudouridine synthase [Arabidopsis thaliana]
            gi|52354299|gb|AAU44470.1| hypothetical protein AT3G04820
            [Arabidopsis thaliana] gi|61742699|gb|AAX55170.1|
            hypothetical protein At3g04820 [Arabidopsis thaliana]
            gi|332640619|gb|AEE74140.1| pseudouridine synthase
            [Arabidopsis thaliana]
          Length = 715

 Score =  413 bits (1061), Expect = e-113
 Identities = 216/369 (58%), Positives = 266/369 (72%), Gaps = 1/369 (0%)
 Frame = -3

Query: 1418 RFGSSSIPTHLIGAALLRGEWKAAVGMILDPREGEKDVTRNTREYYKQSGDIEGTLRQLP 1239
            RFGS S+PTH +GAALL+GEWK AV MILDPRE E+ V  + REYYK++GDI+GTLRQLP
Sbjct: 351  RFGSGSVPTHHVGAALLKGEWKDAVDMILDPRETERHVVNDAREYYKETGDIDGTLRQLP 410

Query: 1238 RYLVAERAILQCFQKCPGNYLQALLAIPRTLRMMFVHSYQSYLWNHAASMRVQKYGCHQV 1059
            RYLVAERAILQC +KCPGNYLQAL  IPRTLRMM+VHSYQSYLWN+AAS+RV+ YG  QV
Sbjct: 411  RYLVAERAILQCLKKCPGNYLQALKGIPRTLRMMYVHSYQSYLWNNAASLRVKNYGTSQV 470

Query: 1058 VLGDLVYCTEQETDKEMTSSPLECVESNDIDTHDDCLLEDISVTDLPEVTNTSVKAISEE 879
            VLGDLV  T+ +  K M  S       +  +  D   ++D +V DLP   +  VK +S E
Sbjct: 471  VLGDLV-STKVDAAKRMVDSLTSEHNESSEEALDCDQVDDTAVVDLPAERSDLVKVVSIE 529

Query: 878  DIAEEKFTIDDVVLPLPGSRISYPLNAIGKIYHDLAEKDGVSLTDSAHNSKEFSLTNMTG 699
            D+    ++  D+VLPLPGSR+ YP N I +IYHDLA+KDG+SLT+S H  KEFS+T+MTG
Sbjct: 530  DLEAGTYSTSDIVLPLPGSRVIYPSNDIAEIYHDLAKKDGISLTESIHGVKEFSITSMTG 589

Query: 698  AYRKVFQKPKDFEWELLNYTDINTPLAETDWDKIAKSQAATIVRDEDEKEQIKPQNGCNT 519
             YR+VFQKP DFEWELL YTD N PLAETD D+I  ++    V   +E E    ++  N 
Sbjct: 590  GYRRVFQKPIDFEWELLTYTDSNKPLAETDLDRIPMNKPVEKVGSTEEIEDESMKSDTNP 649

Query: 518  KTDKCDDEINLSAGTCDTKSTKD-DDIRTEESQMALKLSFTLPSSCYATMAIRELLKTST 342
                   E NL   T   ++ KD  +  +E++QMALK++ TLPSSCYATMAIRELLKTST
Sbjct: 650  HD---SGETNLKDQTDSNEAEKDTGNPDSEQTQMALKMALTLPSSCYATMAIRELLKTST 706

Query: 341  SVAFHKALS 315
            SVA+HK L+
Sbjct: 707  SVAYHKTLN 715