BLASTX nr result

ID: Scutellaria24_contig00014557 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00014557
         (1103 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI34863.3| unnamed protein product [Vitis vinifera]              278   2e-72
ref|XP_002272790.2| PREDICTED: nuclear pore membrane glycoprotei...   264   3e-68
ref|XP_004141110.1| PREDICTED: LOW QUALITY PROTEIN: nuclear pore...   256   9e-66
ref|XP_003525676.1| PREDICTED: nuclear pore membrane glycoprotei...   254   2e-65
ref|XP_002521470.1| RNA binding protein, putative [Ricinus commu...   238   2e-60

>emb|CBI34863.3| unnamed protein product [Vitis vinifera]
          Length = 1961

 Score =  278 bits (710), Expect = 2e-72
 Identities = 136/265 (51%), Positives = 184/265 (69%), Gaps = 4/265 (1%)
 Frame = -3

Query: 1098 IGFAKPWKDPDTGNSYCLFFPYSPENLARSSSKSGDTSKQVLVSVTASLRGDQQISGSAS 919
            +G+AKPW+D  TG SYCLFFPYSPE+LARS  KS D    + +S++AS++    +SGSAS
Sbjct: 1701 VGYAKPWRDFGTGKSYCLFFPYSPEHLARSVPKSKDMRPYISLSISASVQETNHVSGSAS 1760

Query: 918  ALFIGGFIILEMDKRSLHLNLTRDSNERVITLVGNTDVELHWHNKNRLSVKPITRDDHGV 739
            ALF+GGF ILEM K    LNLT  SN+ +IT++GNTDV++HWH ++ + + P+ ++D G+
Sbjct: 1761 ALFVGGFSILEMGK----LNLTAGSNKTIITILGNTDVDIHWHERDSIMISPVHKEDFGI 1816

Query: 738  G---KYEVKVHGAERFQDRLIFSLPETGQRVEIDVSYEPEDGKSLLKPANVTLWAGVSGL 568
            G   KYEVKV  A++F+D+++ +LP  GQRVE+DVSY+P +    +    VTLWAGV G 
Sbjct: 1817 GGLAKYEVKVLQAKKFKDKVVITLPANGQRVELDVSYDPGERAYSVSTVKVTLWAGVVGC 1876

Query: 567  LFLLISTVTIFICYL-XXXXXXXXXXXXXPGIVGPATPQRGPPSTVKEQSPRTPQPFIDY 391
            + LL+ T+ IFI +L                IV P TP R  P+   + SPRTPQPF++Y
Sbjct: 1877 IALLLLTLAIFIFFLDRPDRARPSNPPANSSIVAPTTPDRRSPAVQNDSSPRTPQPFVEY 1936

Query: 390  VRRTIDETPYYKQDSRRRVNPQNTF 316
            VRRTI ETPYY ++ RRRVNPQNT+
Sbjct: 1937 VRRTIHETPYYTREGRRRVNPQNTY 1961


>ref|XP_002272790.2| PREDICTED: nuclear pore membrane glycoprotein 210-like [Vitis
            vinifera]
          Length = 2363

 Score =  264 bits (674), Expect = 3e-68
 Identities = 130/258 (50%), Positives = 177/258 (68%), Gaps = 4/258 (1%)
 Frame = -3

Query: 1098 IGFAKPWKDPDTGNSYCLFFPYSPENLARSSSKSGDTSKQVLVSVTASLRGDQQISGSAS 919
            +G+AKPW+D  TG SYCLFFPYSPE+LARS  KS D    + +S++AS++    +SGSAS
Sbjct: 1775 VGYAKPWRDFGTGKSYCLFFPYSPEHLARSVPKSKDMRPYISLSISASVQETNHVSGSAS 1834

Query: 918  ALFIGGFIILEMDKRSLHLNLTRDSNERVITLVGNTDVELHWHNKNRLSVKPITRDDHGV 739
            ALF+GGF ILEM K    LNLT  SN+ +IT++GNTDV++HWH ++ + + P+ ++D G+
Sbjct: 1835 ALFVGGFSILEMGK----LNLTAGSNKTIITILGNTDVDIHWHERDSIMISPVHKEDFGI 1890

Query: 738  G---KYEVKVHGAERFQDRLIFSLPETGQRVEIDVSYEPEDGKSLLKPANVTLWAGVSGL 568
            G   KYEVKV  A++F+D+++ +LP  GQRVE+DVSY+P +    +    VTLWAGV G 
Sbjct: 1891 GGLAKYEVKVLQAKKFKDKVVITLPANGQRVELDVSYDPGERAYSVSTVKVTLWAGVVGC 1950

Query: 567  LFLLISTVTIFICYL-XXXXXXXXXXXXXPGIVGPATPQRGPPSTVKEQSPRTPQPFIDY 391
            + LL+ T+ IFI +L                IV P TP R  P+   + SPRTPQPF++Y
Sbjct: 1951 IALLLLTLAIFIFFLDRPDRARPSNPPANSSIVAPTTPDRRSPAVQNDSSPRTPQPFVEY 2010

Query: 390  VRRTIDETPYYKQDSRRR 337
            VRRTI ETPYY ++ RRR
Sbjct: 2011 VRRTIHETPYYTREGRRR 2028


>ref|XP_004141110.1| PREDICTED: LOW QUALITY PROTEIN: nuclear pore membrane glycoprotein
            210-like [Cucumis sativus]
          Length = 2257

 Score =  256 bits (653), Expect = 9e-66
 Identities = 138/268 (51%), Positives = 175/268 (65%), Gaps = 12/268 (4%)
 Frame = -3

Query: 1098 IGFAKPWKDPDTGNSYCLFFPYSPENLARSSSKSGDTSKQVLVSVTASLRGDQQISGSAS 919
            +G+AKPW D D  NSYCLFFPYSPE+LARS++KS      + V++ AS R   QI GSAS
Sbjct: 1653 VGYAKPWLDLDYDNSYCLFFPYSPEHLARSATKSKAMRPDISVTIYASSRESSQIFGSAS 1712

Query: 918  ALFIGGFIILEMDKRS-LHLNLTRDSNERVITLVGNTDVELHWHNKNRLSVKPITRDDHG 742
            ALF+GGF ++EMDK S   L LT DSN+  IT++GNTDVELHWH ++ + V PI++++  
Sbjct: 1713 ALFVGGFSVMEMDKVSATQLILTPDSNKTAITILGNTDVELHWHERDLVIVGPISKEESR 1772

Query: 741  VG---KYEVKVHGAERFQDRLIFSLPETGQRVEIDVSYEP-EDGKSLLKPANVTLWAGVS 574
            VG   +YEVK  G +RF+D+++ +L   GQR EIDV Y+P E   S       T+WA V 
Sbjct: 1773 VGGRAEYEVKAMGTKRFRDKILITLAANGQRTEIDVVYDPGEKEASETVFDTTTIWATVL 1832

Query: 573  GLLFLLISTVTIFICYL-------XXXXXXXXXXXXXPGIVGPATPQRGPPSTVKEQSPR 415
            G L LLI T+T+FICYL                    P +  P TP R  P    EQSPR
Sbjct: 1833 GSLSLLILTITLFICYLDKPNRAQPSQPSWPLATTHTPTVAAPRTPDRSSPVISNEQSPR 1892

Query: 414  TPQPFIDYVRRTIDETPYYKQDSRRRVN 331
            TPQPF+DYVR+TIDETPYYK++ RRR N
Sbjct: 1893 TPQPFVDYVRQTIDETPYYKREGRRRFN 1920


>ref|XP_003525676.1| PREDICTED: nuclear pore membrane glycoprotein 210-like [Glycine max]
          Length = 2304

 Score =  254 bits (650), Expect = 2e-65
 Identities = 133/272 (48%), Positives = 177/272 (65%), Gaps = 7/272 (2%)
 Frame = -3

Query: 1098 IGFAKPWKDPDTGNSYCLFFPYSPENLARSSSKSGDTSKQVLVSVTASLRGDQQISGSAS 919
            +G+ KPW D D+GNSYCLFFPYSPE+L  S  K       V +S++ASL   + +SGSAS
Sbjct: 1715 VGYVKPWLDQDSGNSYCLFFPYSPEHLVHSVPKLEGMRPDVSLSISASLE-HEHVSGSAS 1773

Query: 918  ALFIGGFIILEMDKRSLHLNLTRDSNERVITLVGNTDVELHWHNKNRLSVKPITRDDHGV 739
            ALFIGGF I+EM K    LNLT  SN+  IT++GNTDVE+HWH+++ + +  I ++D G+
Sbjct: 1774 ALFIGGFSIMEMSK----LNLTPGSNKTCITVLGNTDVEIHWHHRDLIMISLIHKEDFGI 1829

Query: 738  ---GKYEVKVHGAERFQDRLIFSLPETGQRVEIDVSYEPEDGKSLLKPANVTLWAGVSGL 568
                +YEVK+  A+RF+DR+I +LP  GQ VEID+++EPE+  S     N   WA + G 
Sbjct: 1830 RGFARYEVKLLKAKRFKDRIIITLPANGQSVEIDINHEPEETASSSVTINKAFWASILGY 1889

Query: 567  LFLLISTVTIFICYLXXXXXXXXXXXXXP---GIVGPATPQRGPPSTV-KEQSPRTPQPF 400
            L LLI ++ I   +L                  I  P TP R  PS+V  + SPRTPQPF
Sbjct: 1890 LLLLILSIAIITRFLDRPERSQQTSSSVTTTPSIAAPTTPDRSTPSSVVNDSSPRTPQPF 1949

Query: 399  IDYVRRTIDETPYYKQDSRRRVNPQNTF*ILG 304
            +DYVR+TIDETPYYK++ RRR+NPQNT   +G
Sbjct: 1950 VDYVRKTIDETPYYKREGRRRINPQNTKIFIG 1981


>ref|XP_002521470.1| RNA binding protein, putative [Ricinus communis]
            gi|223539369|gb|EEF40960.1| RNA binding protein, putative
            [Ricinus communis]
          Length = 2256

 Score =  238 bits (608), Expect = 2e-60
 Identities = 126/264 (47%), Positives = 173/264 (65%), Gaps = 10/264 (3%)
 Frame = -3

Query: 1098 IGFAKPWKDPDTGNSYCLFFPYSPENLARSSSKSGDTSKQVLVSVTASLRGDQQISGSAS 919
            +G+AKPW + +TGNSYCLFFPYSPE+L RS  +  D    + VS+ ASLR    ISGSAS
Sbjct: 1675 VGYAKPWMNLETGNSYCLFFPYSPEHLVRSIPRLKDMRPYISVSINASLREASHISGSAS 1734

Query: 918  ALFIGGFIILEMDKRSLHLNLTRDSNERVITLVGNTDVELHWHNKNRLSVKPITRDDHGV 739
            ALFIGGF ILEMDK    LNLT +SN+ V+T++GN+DV++ WH+++ +++ P+ R+D G+
Sbjct: 1735 ALFIGGFSILEMDK----LNLTPESNKSVLTILGNSDVDIQWHSRDVINIIPVHREDLGI 1790

Query: 738  G---KYEVKVHGAERFQDRLIFSLPETGQRVEIDVSYEPEDG-------KSLLKPANVTL 589
            G   +YEVKV   +RF+D++I +LP  GQRVEIDV+YEP+         K    P  V  
Sbjct: 1791 GSRTQYEVKVLRPKRFKDKIIITLPANGQRVEIDVNYEPDARAVPKTIFKGAFLPTIVAC 1850

Query: 588  WAGVSGLLFLLISTVTIFICYLXXXXXXXXXXXXXPGIVGPATPQRGPPSTVKEQSPRTP 409
            +  V G++F+  +       +                I  P TP+R  P  + +QSPRTP
Sbjct: 1851 FGAVLGIIFVFQN------LFRMPNRTRSHTSLATQNITAPHTPERSSP-VLSDQSPRTP 1903

Query: 408  QPFIDYVRRTIDETPYYKQDSRRR 337
            QPF+DYVRRTIDETP+YK+++RRR
Sbjct: 1904 QPFVDYVRRTIDETPFYKREARRR 1927


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