BLASTX nr result
ID: Scutellaria24_contig00014531
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Scutellaria24_contig00014531
(1432 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002266822.1| PREDICTED: pentatricopeptide repeat-containi... 615 e-174
emb|CAN67401.1| hypothetical protein VITISV_025967 [Vitis vinifera] 614 e-173
ref|XP_002884468.1| pentatricopeptide repeat-containing protein ... 590 e-166
ref|XP_002319656.1| predicted protein [Populus trichocarpa] gi|2... 587 e-165
ref|NP_566237.1| pentatricopeptide repeat-containing protein [Ar... 585 e-165
>ref|XP_002266822.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
chloroplastic-like [Vitis vinifera]
Length = 582
Score = 615 bits (1586), Expect = e-174
Identities = 290/416 (69%), Positives = 357/416 (85%)
Frame = -3
Query: 1430 RGFAPDIVTYNIMIGSLCNRGKLDLALSMMDQLIKDKCQPTVITYTILIEAMILEGGVSE 1251
RGF PDIVTYNIMIGSLCNR KL LAL ++DQL+ D C PTVITYTILIEA I+EGG++E
Sbjct: 166 RGFLPDIVTYNIMIGSLCNRRKLGLALKVLDQLLLDNCMPTVITYTILIEATIVEGGINE 225
Query: 1250 AMKLFDEMLSRGLQPDMYTYNTIIRGMCREGLTDEAFEFVSSLTSRGCKPDVISYNILLR 1071
AMKL +EML+RGL PDMYTYN IIRGMC+EG+ + A E ++SLTS+GCKPDVISYNILLR
Sbjct: 226 AMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMVERAAELITSLTSKGCKPDVISYNILLR 285
Query: 1070 ALLNQGKWDDGEKLIKKMFSANCEPNVVTYSILISSLCRDGQLDEAINLLKIMIDEGLNP 891
A LNQGKWD+GEKL+ +MFS CEPN VTYSILISSLCR G++DEAI++LK+MI++ L P
Sbjct: 286 AFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTP 345
Query: 890 DTYTYDPLISALCKEGRLDLAIAFLDHMISSGCFPDIVNYNTILSALCKNGNADEALEVF 711
DTY+YDPLISALCKEGRLDLAI +D+MIS+GC PDIVNYNTIL+ALCKNGNA++ALE+F
Sbjct: 346 DTYSYDPLISALCKEGRLDLAIGIMDYMISNGCLPDIVNYNTILAALCKNGNANQALEIF 405
Query: 710 GKLAENGCPPDVSTYNTLISALWNTGDRARALKLVSEMIFKGINPDEITYNSLISRLCRD 531
KL GCPP+VS+YNT+ISALW+ GDR+RAL +V MI KG++PDEITYNSLIS LCRD
Sbjct: 406 NKLRGMGCPPNVSSYNTMISALWSCGDRSRALGMVPAMISKGVDPDEITYNSLISCLCRD 465
Query: 530 GMVDKGVELLGDMKKSEFLPSIVTYNILLLGLCKAHRIDDAIALIAEMVESGCQPNETSY 351
G+V++ + LL DM++S F P++++YNI+LLGLCK RIDDAI + AEM+E GC+PNET+Y
Sbjct: 466 GLVEEAIGLLDDMEQSGFRPTVISYNIVLLGLCKVRRIDDAIGMFAEMIEKGCRPNETTY 525
Query: 350 VLLIEGIGFSGWRVEAMQVATSLYKKHVISSQSLRRLSRTFPINDVYGGFNRTEIK 183
+LLIEGIGF+GWR EAM++A SL+ + VIS S +RL++TFP+ DVY + +E K
Sbjct: 526 ILLIEGIGFAGWRTEAMELANSLFSRDVISQDSFKRLNKTFPMLDVYKELSNSETK 581
Score = 234 bits (596), Expect = 5e-59
Identities = 121/376 (32%), Positives = 209/376 (55%)
Frame = -3
Query: 1394 MIGSLCNRGKLDLALSMMDQLIKDKCQPTVITYTILIEAMILEGGVSEAMKLFDEMLSRG 1215
++ C GK + +L ++ L+ P VI T LI+ + +A ++ E+L
Sbjct: 74 LLNRSCKAGKFNESLYFLECLVNKGYTPDVILCTKLIKGFFNFKNIEKASRVM-EILESH 132
Query: 1214 LQPDMYTYNTIIRGMCREGLTDEAFEFVSSLTSRGCKPDVISYNILLRALLNQGKWDDGE 1035
+PD++ YN +I G C+ + A + ++ + +RG PD+++YNI++ +L N+ K
Sbjct: 133 TEPDVFAYNAVISGFCKVNRIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLAL 192
Query: 1034 KLIKKMFSANCEPNVVTYSILISSLCRDGQLDEAINLLKIMIDEGLNPDTYTYDPLISAL 855
K++ ++ NC P V+TY+ILI + +G ++EA+ LL+ M+ GL PD YTY+ +I +
Sbjct: 193 KVLDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGM 252
Query: 854 CKEGRLDLAIAFLDHMISSGCFPDIVNYNTILSALCKNGNADEALEVFGKLAENGCPPDV 675
CKEG ++ A + + S GC PD+++YN +L A G DE ++ ++ GC P+
Sbjct: 253 CKEGMVERAAELITSLTSKGCKPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNK 312
Query: 674 STYNTLISALWNTGDRARALKLVSEMIFKGINPDEITYNSLISRLCRDGMVDKGVELLGD 495
TY+ LIS+L G A+ ++ MI K + PD +Y+ LIS LC++G +D + ++
Sbjct: 313 VTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDY 372
Query: 494 MKKSEFLPSIVTYNILLLGLCKAHRIDDAIALIAEMVESGCQPNETSYVLLIEGIGFSGW 315
M + LP IV YN +L LCK + A+ + ++ GC PN +SY +I + G
Sbjct: 373 MISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGD 432
Query: 314 RVEAMQVATSLYKKHV 267
R A+ + ++ K V
Sbjct: 433 RSRALGMVPAMISKGV 448
>emb|CAN67401.1| hypothetical protein VITISV_025967 [Vitis vinifera]
Length = 592
Score = 614 bits (1584), Expect = e-173
Identities = 290/416 (69%), Positives = 358/416 (86%)
Frame = -3
Query: 1430 RGFAPDIVTYNIMIGSLCNRGKLDLALSMMDQLIKDKCQPTVITYTILIEAMILEGGVSE 1251
RGF PDIVTYNIMIGSLCNR KL LAL+++DQL+ D C PTVITYTILIEA I+EGG++E
Sbjct: 176 RGFLPDIVTYNIMIGSLCNRRKLGLALTVLDQLLLDNCMPTVITYTILIEATIVEGGINE 235
Query: 1250 AMKLFDEMLSRGLQPDMYTYNTIIRGMCREGLTDEAFEFVSSLTSRGCKPDVISYNILLR 1071
AMKL +EML+RGL PDMYTYN IIRGMC+EG+ + A E ++SLTS+GC+PDVISYNILLR
Sbjct: 236 AMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMVERAAELITSLTSKGCEPDVISYNILLR 295
Query: 1070 ALLNQGKWDDGEKLIKKMFSANCEPNVVTYSILISSLCRDGQLDEAINLLKIMIDEGLNP 891
A LNQGKWD+GEKL+ +MFS CEPN VTYSILISSLCR G++DEAI++LK+MI++ L P
Sbjct: 296 AFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTP 355
Query: 890 DTYTYDPLISALCKEGRLDLAIAFLDHMISSGCFPDIVNYNTILSALCKNGNADEALEVF 711
DTY+YDPLISALCKEGRLDLAI +D+MIS+GC PDIVNYNTIL+ALCKNGNA++ALE+F
Sbjct: 356 DTYSYDPLISALCKEGRLDLAIGIMDYMISNGCLPDIVNYNTILAALCKNGNANQALEIF 415
Query: 710 GKLAENGCPPDVSTYNTLISALWNTGDRARALKLVSEMIFKGINPDEITYNSLISRLCRD 531
KL GCPP+VS+YNT+ISALW+ GDR+RAL +V MI KGI+PDEITYNSLIS LCRD
Sbjct: 416 NKLRGMGCPPNVSSYNTMISALWSCGDRSRALGMVPAMISKGIDPDEITYNSLISCLCRD 475
Query: 530 GMVDKGVELLGDMKKSEFLPSIVTYNILLLGLCKAHRIDDAIALIAEMVESGCQPNETSY 351
G+V++ + LL DM++S F P++++YNI+LLGLCK RIDDAI + AEM+E GC+PNET+Y
Sbjct: 476 GLVEEAIGLLDDMEQSGFRPTVISYNIVLLGLCKVRRIDDAIGMFAEMIEKGCRPNETTY 535
Query: 350 VLLIEGIGFSGWRVEAMQVATSLYKKHVISSQSLRRLSRTFPINDVYGGFNRTEIK 183
+LLIEGIGF+GWR EAM++A SL+ + VIS S +RL++TFP+ DVY + +E K
Sbjct: 536 ILLIEGIGFAGWRTEAMELANSLFSRDVISQDSFKRLNKTFPMLDVYKELSNSETK 591
Score = 231 bits (589), Expect = 4e-58
Identities = 119/376 (31%), Positives = 208/376 (55%)
Frame = -3
Query: 1394 MIGSLCNRGKLDLALSMMDQLIKDKCQPTVITYTILIEAMILEGGVSEAMKLFDEMLSRG 1215
++ C GK + +L ++ L+ P VI T LI+ + +A ++ E+L
Sbjct: 84 LLNRSCKAGKFNESLYFLECLVNKGYTPDVILCTKLIKGFFNFKNIEKASRVM-EILESH 142
Query: 1214 LQPDMYTYNTIIRGMCREGLTDEAFEFVSSLTSRGCKPDVISYNILLRALLNQGKWDDGE 1035
+PD++ YN +I G C+ + A + ++ + +RG PD+++YNI++ +L N+ K
Sbjct: 143 TEPDVFAYNAVISGFCKVNQIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLAL 202
Query: 1034 KLIKKMFSANCEPNVVTYSILISSLCRDGQLDEAINLLKIMIDEGLNPDTYTYDPLISAL 855
++ ++ NC P V+TY+ILI + +G ++EA+ LL+ M+ GL PD YTY+ +I +
Sbjct: 203 TVLDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGM 262
Query: 854 CKEGRLDLAIAFLDHMISSGCFPDIVNYNTILSALCKNGNADEALEVFGKLAENGCPPDV 675
CKEG ++ A + + S GC PD+++YN +L A G DE ++ ++ GC P+
Sbjct: 263 CKEGMVERAAELITSLTSKGCEPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNK 322
Query: 674 STYNTLISALWNTGDRARALKLVSEMIFKGINPDEITYNSLISRLCRDGMVDKGVELLGD 495
TY+ LIS+L G A+ ++ MI K + PD +Y+ LIS LC++G +D + ++
Sbjct: 323 VTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDY 382
Query: 494 MKKSEFLPSIVTYNILLLGLCKAHRIDDAIALIAEMVESGCQPNETSYVLLIEGIGFSGW 315
M + LP IV YN +L LCK + A+ + ++ GC PN +SY +I + G
Sbjct: 383 MISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGD 442
Query: 314 RVEAMQVATSLYKKHV 267
R A+ + ++ K +
Sbjct: 443 RSRALGMVPAMISKGI 458
>ref|XP_002884468.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297330308|gb|EFH60727.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 598
Score = 590 bits (1520), Expect = e-166
Identities = 276/406 (67%), Positives = 345/406 (84%)
Frame = -3
Query: 1430 RGFAPDIVTYNIMIGSLCNRGKLDLALSMMDQLIKDKCQPTVITYTILIEAMILEGGVSE 1251
+ F+PD VTYNIMIGSLC+RGKLDLAL ++DQL+ D CQPTVITYTILIEA +LEGGV E
Sbjct: 183 KDFSPDTVTYNIMIGSLCSRGKLDLALKVLDQLLSDNCQPTVITYTILIEATMLEGGVDE 242
Query: 1250 AMKLFDEMLSRGLQPDMYTYNTIIRGMCREGLTDEAFEFVSSLTSRGCKPDVISYNILLR 1071
A+KL DEMLSRGL+PDM+TYNTIIRGMC+EG+ D AFE + +L +GC+PDVISYNILLR
Sbjct: 243 ALKLLDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMIRNLELKGCEPDVISYNILLR 302
Query: 1070 ALLNQGKWDDGEKLIKKMFSANCEPNVVTYSILISSLCRDGQLDEAINLLKIMIDEGLNP 891
ALLNQGKW++GEKL+ KMFS C+PNVVTYSILI++LCRDG+++EA+NLLK+M ++GL P
Sbjct: 303 ALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTP 362
Query: 890 DTYTYDPLISALCKEGRLDLAIAFLDHMISSGCFPDIVNYNTILSALCKNGNADEALEVF 711
D Y+YDPLI+A C+EGRLD+AI FL+ MIS GC PDIVNYNT+L+ LCKNG AD+ALE+F
Sbjct: 363 DAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIF 422
Query: 710 GKLAENGCPPDVSTYNTLISALWNTGDRARALKLVSEMIFKGINPDEITYNSLISRLCRD 531
GKL E GC P+ S+YNT+ SALW++GD+ RAL ++ EM+ GI+PDEITYNS+IS LCR+
Sbjct: 423 GKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMVSNGIDPDEITYNSMISCLCRE 482
Query: 530 GMVDKGVELLGDMKKSEFLPSIVTYNILLLGLCKAHRIDDAIALIAEMVESGCQPNETSY 351
GMVDK ELL DM+ EF PS+VTYNI+LLG CKAHRI+DAI ++ MV +GC+PNET+Y
Sbjct: 483 GMVDKAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAIDVLDSMVGNGCRPNETTY 542
Query: 350 VLLIEGIGFSGWRVEAMQVATSLYKKHVISSQSLRRLSRTFPINDV 213
+LIEGIGF+G+R EAM++A L + + IS S +RL RTFP+ +V
Sbjct: 543 TVLIEGIGFAGYRAEAMELANDLVRINAISEYSFKRLHRTFPLLNV 588
Score = 248 bits (634), Expect = 2e-63
Identities = 124/362 (34%), Positives = 206/362 (56%)
Frame = -3
Query: 1379 CNRGKLDLALSMMDQLIKDKCQPTVITYTILIEAMILEGGVSEAMKLFDEMLSRGLQPDM 1200
C G +L +++ +++ P VI T LI+ V +A+++ E+L + QPD+
Sbjct: 96 CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNVPKAVRVM-EILEKFGQPDV 154
Query: 1199 YTYNTIIRGMCREGLTDEAFEFVSSLTSRGCKPDVISYNILLRALLNQGKWDDGEKLIKK 1020
+ YN +I G C+ D+A + + S+ PD ++YNI++ +L ++GK D K++ +
Sbjct: 155 FAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLDQ 214
Query: 1019 MFSANCEPNVVTYSILISSLCRDGQLDEAINLLKIMIDEGLNPDTYTYDPLISALCKEGR 840
+ S NC+P V+TY+ILI + +G +DEA+ LL M+ GL PD +TY+ +I +CKEG
Sbjct: 215 LLSDNCQPTVITYTILIEATMLEGGVDEALKLLDEMLSRGLKPDMFTYNTIIRGMCKEGM 274
Query: 839 LDLAIAFLDHMISSGCFPDIVNYNTILSALCKNGNADEALEVFGKLAENGCPPDVSTYNT 660
+D A + ++ GC PD+++YN +L AL G +E ++ K+ C P+V TY+
Sbjct: 275 VDRAFEMIRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSI 334
Query: 659 LISALWNTGDRARALKLVSEMIFKGINPDEITYNSLISRLCRDGMVDKGVELLGDMKKSE 480
LI+ L G A+ L+ M KG+ PD +Y+ LI+ CR+G +D +E L M
Sbjct: 335 LITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDG 394
Query: 479 FLPSIVTYNILLLGLCKAHRIDDAIALIAEMVESGCQPNETSYVLLIEGIGFSGWRVEAM 300
LP IV YN +L LCK + D A+ + ++ E GC PN +SY + + SG ++ A+
Sbjct: 395 CLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRAL 454
Query: 299 QV 294
+
Sbjct: 455 HM 456
Score = 186 bits (472), Expect = 1e-44
Identities = 103/331 (31%), Positives = 165/331 (49%), Gaps = 34/331 (10%)
Frame = -3
Query: 1184 IIRGMCREGLTDEAFEFVSSLTSRGCKPDVI----------------------------- 1092
I CR G E+ + ++ +G PDVI
Sbjct: 91 IFHRSCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNVPKAVRVMEILEKFG 150
Query: 1091 -----SYNILLRALLNQGKWDDGEKLIKKMFSANCEPNVVTYSILISSLCRDGQLDEAIN 927
+YN L+ + DD +++ +M S + P+ VTY+I+I SLC G+LD A+
Sbjct: 151 QPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALK 210
Query: 926 LLKIMIDEGLNPDTYTYDPLISALCKEGRLDLAIAFLDHMISSGCFPDIVNYNTILSALC 747
+L ++ + P TY LI A EG +D A+ LD M+S G PD+ YNTI+ +C
Sbjct: 211 VLDQLLSDNCQPTVITYTILIEATMLEGGVDEALKLLDEMLSRGLKPDMFTYNTIIRGMC 270
Query: 746 KNGNADEALEVFGKLAENGCPPDVSTYNTLISALWNTGDRARALKLVSEMIFKGINPDEI 567
K G D A E+ L GC PDV +YN L+ AL N G KL+++M + +P+ +
Sbjct: 271 KEGMVDRAFEMIRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVV 330
Query: 566 TYNSLISRLCRDGMVDKGVELLGDMKKSEFLPSIVTYNILLLGLCKAHRIDDAIALIAEM 387
TY+ LI+ LCRDG +++ + LL MK+ P +Y+ L+ C+ R+D AI + M
Sbjct: 331 TYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETM 390
Query: 386 VESGCQPNETSYVLLIEGIGFSGWRVEAMQV 294
+ GC P+ +Y ++ + +G +A+++
Sbjct: 391 ISDGCLPDIVNYNTVLATLCKNGKADQALEI 421
Score = 154 bits (389), Expect = 5e-35
Identities = 85/261 (32%), Positives = 138/261 (52%)
Frame = -3
Query: 1055 GKWDDGEKLIKKMFSANCEPNVVTYSILISSLCRDGQLDEAINLLKIMIDEGLNPDTYTY 876
G + + L++ M P+V+ + LI + +A+ +++I+ G PD + Y
Sbjct: 99 GNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNVPKAVRVMEILEKFG-QPDVFAY 157
Query: 875 DPLISALCKEGRLDLAIAFLDHMISSGCFPDIVNYNTILSALCKNGNADEALEVFGKLAE 696
+ LI+ CK R+D A LD M S PD V YN ++ +LC G D AL+V +L
Sbjct: 158 NALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLDQLLS 217
Query: 695 NGCPPDVSTYNTLISALWNTGDRARALKLVSEMIFKGINPDEITYNSLISRLCRDGMVDK 516
+ C P V TY LI A G ALKL+ EM+ +G+ PD TYN++I +C++GMVD+
Sbjct: 218 DNCQPTVITYTILIEATMLEGGVDEALKLLDEMLSRGLKPDMFTYNTIIRGMCKEGMVDR 277
Query: 515 GVELLGDMKKSEFLPSIVTYNILLLGLCKAHRIDDAIALIAEMVESGCQPNETSYVLLIE 336
E++ +++ P +++YNILL L + ++ L+ +M C PN +Y +LI
Sbjct: 278 AFEMIRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILIT 337
Query: 335 GIGFSGWRVEAMQVATSLYKK 273
+ G EAM + + +K
Sbjct: 338 TLCRDGKIEEAMNLLKLMKEK 358
>ref|XP_002319656.1| predicted protein [Populus trichocarpa] gi|222858032|gb|EEE95579.1|
predicted protein [Populus trichocarpa]
Length = 487
Score = 587 bits (1514), Expect = e-165
Identities = 275/411 (66%), Positives = 346/411 (84%), Gaps = 1/411 (0%)
Frame = -3
Query: 1430 RGFAPDIVTYNIMIGSLCNRGKLDLALSMMDQLIKDK-CQPTVITYTILIEAMILEGGVS 1254
+GF+PD+VT+NIMIG+ C +GK+DLAL + ++L+KD C+PT+ITYTILIEA ILEGG+
Sbjct: 73 KGFSPDVVTHNIMIGTFCGKGKIDLALKVFEELLKDNNCKPTLITYTILIEAYILEGGID 132
Query: 1253 EAMKLFDEMLSRGLQPDMYTYNTIIRGMCREGLTDEAFEFVSSLTSRGCKPDVISYNILL 1074
EA+KL DEMLSRGL+PD +TYN I RG+C+EG D AFEFV +L SRGCKPDVI+YNILL
Sbjct: 133 EALKLLDEMLSRGLEPDTFTYNVITRGLCKEGKVDRAFEFVRTLNSRGCKPDVITYNILL 192
Query: 1073 RALLNQGKWDDGEKLIKKMFSANCEPNVVTYSILISSLCRDGQLDEAINLLKIMIDEGLN 894
RALLNQGKWD+GEK + ++FS CEPNVVTYSILISSLCRDG+++E++NL+K+M ++GL
Sbjct: 193 RALLNQGKWDEGEKWMSEIFSRGCEPNVVTYSILISSLCRDGKIEESVNLVKVMKEKGLT 252
Query: 893 PDTYTYDPLISALCKEGRLDLAIAFLDHMISSGCFPDIVNYNTILSALCKNGNADEALEV 714
PD Y YDPLI+A C+EG+LD+AI FLD MI G PDIVNYNTI++ALCKNGN D A+E+
Sbjct: 253 PDAYCYDPLIAAFCREGKLDMAIEFLDCMICDGFLPDIVNYNTIMAALCKNGNGDHAVEI 312
Query: 713 FGKLAENGCPPDVSTYNTLISALWNTGDRARALKLVSEMIFKGINPDEITYNSLISRLCR 534
FGKL E GCPP+VS+YNT++SALW++GDR RAL ++S+M+ KGI+PD ITYNSLIS LCR
Sbjct: 313 FGKLDEVGCPPNVSSYNTMLSALWSSGDRYRALGMISQMLSKGIDPDVITYNSLISCLCR 372
Query: 533 DGMVDKGVELLGDMKKSEFLPSIVTYNILLLGLCKAHRIDDAIALIAEMVESGCQPNETS 354
DGMVD+ + LL DM F P+IV+Y +LLGLCKAHRIDDAI ++A M+E+GCQPNET+
Sbjct: 373 DGMVDEAIGLLADMLSGRFQPNIVSYKTVLLGLCKAHRIDDAIEVLAAMIENGCQPNETT 432
Query: 353 YVLLIEGIGFSGWRVEAMQVATSLYKKHVISSQSLRRLSRTFPINDVYGGF 201
Y LLIEGIGFSG R +AM++A SLY + IS S +RL++TFP+ DVY GF
Sbjct: 433 YTLLIEGIGFSGSRTQAMELANSLYIMNAISEDSFKRLNKTFPLLDVYKGF 483
Score = 236 bits (603), Expect = 8e-60
Identities = 122/351 (34%), Positives = 195/351 (55%), Gaps = 1/351 (0%)
Frame = -3
Query: 1316 QPTVITYTILIEAMILEGGVSEAMKLFDEMLSRGLQPDMYTYNTIIRGMCREGLTDEAFE 1137
QP VI T LI+ + +A ++ + G +PD++ YN +I G C+ + A
Sbjct: 7 QPDVILCTKLIKGFFNSRNIDKATRVMGILEKHG-KPDVFAYNAVISGFCKANRIESAKT 65
Query: 1136 FVSSLTSRGCKPDVISYNILLRALLNQGKWDDGEKLIKKMF-SANCEPNVVTYSILISSL 960
+ + +G PDV+++NI++ +GK D K+ +++ NC+P ++TY+ILI +
Sbjct: 66 VLDRMKRKGFSPDVVTHNIMIGTFCGKGKIDLALKVFEELLKDNNCKPTLITYTILIEAY 125
Query: 959 CRDGQLDEAINLLKIMIDEGLNPDTYTYDPLISALCKEGRLDLAIAFLDHMISSGCFPDI 780
+G +DEA+ LL M+ GL PDT+TY+ + LCKEG++D A F+ + S GC PD+
Sbjct: 126 ILEGGIDEALKLLDEMLSRGLEPDTFTYNVITRGLCKEGKVDRAFEFVRTLNSRGCKPDV 185
Query: 779 VNYNTILSALCKNGNADEALEVFGKLAENGCPPDVSTYNTLISALWNTGDRARALKLVSE 600
+ YN +L AL G DE + ++ GC P+V TY+ LIS+L G ++ LV
Sbjct: 186 ITYNILLRALLNQGKWDEGEKWMSEIFSRGCEPNVVTYSILISSLCRDGKIEESVNLVKV 245
Query: 599 MIFKGINPDEITYNSLISRLCRDGMVDKGVELLGDMKKSEFLPSIVTYNILLLGLCKAHR 420
M KG+ PD Y+ LI+ CR+G +D +E L M FLP IV YN ++ LCK
Sbjct: 246 MKEKGLTPDAYCYDPLIAAFCREGKLDMAIEFLDCMICDGFLPDIVNYNTIMAALCKNGN 305
Query: 419 IDDAIALIAEMVESGCQPNETSYVLLIEGIGFSGWRVEAMQVATSLYKKHV 267
D A+ + ++ E GC PN +SY ++ + SG R A+ + + + K +
Sbjct: 306 GDHAVEIFGKLDEVGCPPNVSSYNTMLSALWSSGDRYRALGMISQMLSKGI 356
Score = 149 bits (375), Expect = 2e-33
Identities = 81/250 (32%), Positives = 131/250 (52%), Gaps = 1/250 (0%)
Frame = -3
Query: 1019 MFSANCEPNVVTYSILISSLCRDGQLDEAINLLKIMIDEGLNPDTYTYDPLISALCKEGR 840
M + + +P+V+ + LI +D+A ++ I+ G PD + Y+ +IS CK R
Sbjct: 1 MVAKDYQPDVILCTKLIKGFFNSRNIDKATRVMGILEKHG-KPDVFAYNAVISGFCKANR 59
Query: 839 LDLAIAFLDHMISSGCFPDIVNYNTILSALCKNGNADEALEVFGK-LAENGCPPDVSTYN 663
++ A LD M G PD+V +N ++ C G D AL+VF + L +N C P + TY
Sbjct: 60 IESAKTVLDRMKRKGFSPDVVTHNIMIGTFCGKGKIDLALKVFEELLKDNNCKPTLITYT 119
Query: 662 TLISALWNTGDRARALKLVSEMIFKGINPDEITYNSLISRLCRDGMVDKGVELLGDMKKS 483
LI A G ALKL+ EM+ +G+ PD TYN + LC++G VD+ E + +
Sbjct: 120 ILIEAYILEGGIDEALKLLDEMLSRGLEPDTFTYNVITRGLCKEGKVDRAFEFVRTLNSR 179
Query: 482 EFLPSIVTYNILLLGLCKAHRIDDAIALIAEMVESGCQPNETSYVLLIEGIGFSGWRVEA 303
P ++TYNILL L + D+ ++E+ GC+PN +Y +LI + G E+
Sbjct: 180 GCKPDVITYNILLRALLNQGKWDEGEKWMSEIFSRGCEPNVVTYSILISSLCRDGKIEES 239
Query: 302 MQVATSLYKK 273
+ + + +K
Sbjct: 240 VNLVKVMKEK 249
>ref|NP_566237.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207286|sp|Q9SR00.1|PP213_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At3g04760, chloroplastic; Flags: Precursor
gi|6175176|gb|AAF04902.1|AC011437_17 hypothetical protein
[Arabidopsis thaliana] gi|15810359|gb|AAL07067.1| unknown
protein [Arabidopsis thaliana] gi|22136960|gb|AAM91709.1|
unknown protein [Arabidopsis thaliana]
gi|332640611|gb|AEE74132.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 602
Score = 585 bits (1509), Expect = e-165
Identities = 275/406 (67%), Positives = 344/406 (84%)
Frame = -3
Query: 1430 RGFAPDIVTYNIMIGSLCNRGKLDLALSMMDQLIKDKCQPTVITYTILIEAMILEGGVSE 1251
+ F+PD VTYNIMIGSLC+RGKLDLAL +++QL+ D CQPTVITYTILIEA +LEGGV E
Sbjct: 187 KDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDE 246
Query: 1250 AMKLFDEMLSRGLQPDMYTYNTIIRGMCREGLTDEAFEFVSSLTSRGCKPDVISYNILLR 1071
A+KL DEMLSRGL+PDM+TYNTIIRGMC+EG+ D AFE V +L +GC+PDVISYNILLR
Sbjct: 247 ALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLR 306
Query: 1070 ALLNQGKWDDGEKLIKKMFSANCEPNVVTYSILISSLCRDGQLDEAINLLKIMIDEGLNP 891
ALLNQGKW++GEKL+ KMFS C+PNVVTYSILI++LCRDG+++EA+NLLK+M ++GL P
Sbjct: 307 ALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTP 366
Query: 890 DTYTYDPLISALCKEGRLDLAIAFLDHMISSGCFPDIVNYNTILSALCKNGNADEALEVF 711
D Y+YDPLI+A C+EGRLD+AI FL+ MIS GC PDIVNYNT+L+ LCKNG AD+ALE+F
Sbjct: 367 DAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIF 426
Query: 710 GKLAENGCPPDVSTYNTLISALWNTGDRARALKLVSEMIFKGINPDEITYNSLISRLCRD 531
GKL E GC P+ S+YNT+ SALW++GD+ RAL ++ EM+ GI+PDEITYNS+IS LCR+
Sbjct: 427 GKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCRE 486
Query: 530 GMVDKGVELLGDMKKSEFLPSIVTYNILLLGLCKAHRIDDAIALIAEMVESGCQPNETSY 351
GMVD+ ELL DM+ EF PS+VTYNI+LLG CKAHRI+DAI ++ MV +GC+PNET+Y
Sbjct: 487 GMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTY 546
Query: 350 VLLIEGIGFSGWRVEAMQVATSLYKKHVISSQSLRRLSRTFPINDV 213
+LIEGIGF+G+R EAM++A L + IS S +RL RTFP+ +V
Sbjct: 547 TVLIEGIGFAGYRAEAMELANDLVRIDAISEYSFKRLHRTFPLLNV 592
Score = 247 bits (631), Expect = 5e-63
Identities = 122/362 (33%), Positives = 206/362 (56%)
Frame = -3
Query: 1379 CNRGKLDLALSMMDQLIKDKCQPTVITYTILIEAMILEGGVSEAMKLFDEMLSRGLQPDM 1200
C G +L +++ +++ P VI T LI+ + +A+++ E+L + QPD+
Sbjct: 100 CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVM-EILEKFGQPDV 158
Query: 1199 YTYNTIIRGMCREGLTDEAFEFVSSLTSRGCKPDVISYNILLRALLNQGKWDDGEKLIKK 1020
+ YN +I G C+ D+A + + S+ PD ++YNI++ +L ++GK D K++ +
Sbjct: 159 FAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQ 218
Query: 1019 MFSANCEPNVVTYSILISSLCRDGQLDEAINLLKIMIDEGLNPDTYTYDPLISALCKEGR 840
+ S NC+P V+TY+ILI + +G +DEA+ L+ M+ GL PD +TY+ +I +CKEG
Sbjct: 219 LLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGM 278
Query: 839 LDLAIAFLDHMISSGCFPDIVNYNTILSALCKNGNADEALEVFGKLAENGCPPDVSTYNT 660
+D A + ++ GC PD+++YN +L AL G +E ++ K+ C P+V TY+
Sbjct: 279 VDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSI 338
Query: 659 LISALWNTGDRARALKLVSEMIFKGINPDEITYNSLISRLCRDGMVDKGVELLGDMKKSE 480
LI+ L G A+ L+ M KG+ PD +Y+ LI+ CR+G +D +E L M
Sbjct: 339 LITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDG 398
Query: 479 FLPSIVTYNILLLGLCKAHRIDDAIALIAEMVESGCQPNETSYVLLIEGIGFSGWRVEAM 300
LP IV YN +L LCK + D A+ + ++ E GC PN +SY + + SG ++ A+
Sbjct: 399 CLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRAL 458
Query: 299 QV 294
+
Sbjct: 459 HM 460
Score = 185 bits (470), Expect = 2e-44
Identities = 102/331 (30%), Positives = 165/331 (49%), Gaps = 34/331 (10%)
Frame = -3
Query: 1184 IIRGMCREGLTDEAFEFVSSLTSRGCKPDVI----------------------------- 1092
I CR G E+ + ++ +G PDVI
Sbjct: 95 IFHRSCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG 154
Query: 1091 -----SYNILLRALLNQGKWDDGEKLIKKMFSANCEPNVVTYSILISSLCRDGQLDEAIN 927
+YN L+ + DD +++ +M S + P+ VTY+I+I SLC G+LD A+
Sbjct: 155 QPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALK 214
Query: 926 LLKIMIDEGLNPDTYTYDPLISALCKEGRLDLAIAFLDHMISSGCFPDIVNYNTILSALC 747
+L ++ + P TY LI A EG +D A+ +D M+S G PD+ YNTI+ +C
Sbjct: 215 VLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMC 274
Query: 746 KNGNADEALEVFGKLAENGCPPDVSTYNTLISALWNTGDRARALKLVSEMIFKGINPDEI 567
K G D A E+ L GC PDV +YN L+ AL N G KL+++M + +P+ +
Sbjct: 275 KEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVV 334
Query: 566 TYNSLISRLCRDGMVDKGVELLGDMKKSEFLPSIVTYNILLLGLCKAHRIDDAIALIAEM 387
TY+ LI+ LCRDG +++ + LL MK+ P +Y+ L+ C+ R+D AI + M
Sbjct: 335 TYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETM 394
Query: 386 VESGCQPNETSYVLLIEGIGFSGWRVEAMQV 294
+ GC P+ +Y ++ + +G +A+++
Sbjct: 395 ISDGCLPDIVNYNTVLATLCKNGKADQALEI 425
Score = 154 bits (390), Expect = 4e-35
Identities = 85/261 (32%), Positives = 138/261 (52%)
Frame = -3
Query: 1055 GKWDDGEKLIKKMFSANCEPNVVTYSILISSLCRDGQLDEAINLLKIMIDEGLNPDTYTY 876
G + + L++ M P+V+ + LI + +A+ +++I+ G PD + Y
Sbjct: 103 GNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG-QPDVFAY 161
Query: 875 DPLISALCKEGRLDLAIAFLDHMISSGCFPDIVNYNTILSALCKNGNADEALEVFGKLAE 696
+ LI+ CK R+D A LD M S PD V YN ++ +LC G D AL+V +L
Sbjct: 162 NALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLS 221
Query: 695 NGCPPDVSTYNTLISALWNTGDRARALKLVSEMIFKGINPDEITYNSLISRLCRDGMVDK 516
+ C P V TY LI A G ALKL+ EM+ +G+ PD TYN++I +C++GMVD+
Sbjct: 222 DNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDR 281
Query: 515 GVELLGDMKKSEFLPSIVTYNILLLGLCKAHRIDDAIALIAEMVESGCQPNETSYVLLIE 336
E++ +++ P +++YNILL L + ++ L+ +M C PN +Y +LI
Sbjct: 282 AFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILIT 341
Query: 335 GIGFSGWRVEAMQVATSLYKK 273
+ G EAM + + +K
Sbjct: 342 TLCRDGKIEEAMNLLKLMKEK 362