BLASTX nr result

ID: Scutellaria24_contig00014494 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00014494
         (316 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004143028.1| PREDICTED: ribosome biogenesis GTPase A-like...   158   4e-37
ref|XP_002874640.1| predicted protein [Arabidopsis lyrata subsp....   146   2e-33
ref|XP_002277185.1| PREDICTED: ribosome biogenesis GTPase A [Vit...   144   6e-33
ref|NP_192803.4| GTP binding protein [Arabidopsis thaliana] gi|3...   141   5e-32
ref|XP_002526350.1| GTP binding protein, putative [Ricinus commu...   133   2e-29

>ref|XP_004143028.1| PREDICTED: ribosome biogenesis GTPase A-like [Cucumis sativus]
           gi|449482814|ref|XP_004156412.1| PREDICTED: ribosome
           biogenesis GTPase A-like [Cucumis sativus]
          Length = 366

 Score =  158 bits (400), Expect = 4e-37
 Identities = 77/104 (74%), Positives = 90/104 (86%)
 Frame = -1

Query: 316 RVRELKKKGAPDNAITLMLVGIPNVGKSALANSLHLVGRITAAEKGKLRRSVITPYPGET 137
           RVRELKK G   +A T+MLVGIPNVGKSALANSLH +GRI+AAEKGKL+ +V++  PGET
Sbjct: 125 RVRELKKSGHSSHATTMMLVGIPNVGKSALANSLHQIGRISAAEKGKLKHAVVSSQPGET 184

Query: 136 KSIISLKIASHPNIYVLDTPGVLPPDVNSYEVCSKLALTGAIKD 5
           K+I SLKIASHPNIYVLDTPG+ PP ++  EVCSKLALTGAI+D
Sbjct: 185 KNISSLKIASHPNIYVLDTPGIFPPKIDDIEVCSKLALTGAIRD 228


>ref|XP_002874640.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297320477|gb|EFH50899.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 373

 Score =  146 bits (368), Expect = 2e-33
 Identities = 68/104 (65%), Positives = 85/104 (81%)
 Frame = -1

Query: 316 RVRELKKKGAPDNAITLMLVGIPNVGKSALANSLHLVGRITAAEKGKLRRSVITPYPGET 137
           +VREL K G   +  T+ML+GIPN+GKSALANSLH +GRI+AAEKGKL+ + ++  PG+T
Sbjct: 127 QVRELHKAGYSGHTTTMMLLGIPNIGKSALANSLHQIGRISAAEKGKLKHTTVSSQPGDT 186

Query: 136 KSIISLKIASHPNIYVLDTPGVLPPDVNSYEVCSKLALTGAIKD 5
           K I+SLKI SHPN+YVLDTPG+ PP +N  E+CSKLALTGAI D
Sbjct: 187 KDIMSLKIGSHPNVYVLDTPGIFPPTLNDAEICSKLALTGAIPD 230


>ref|XP_002277185.1| PREDICTED: ribosome biogenesis GTPase A [Vitis vinifera]
           gi|297744953|emb|CBI38545.3| unnamed protein product
           [Vitis vinifera]
          Length = 369

 Score =  144 bits (364), Expect = 6e-33
 Identities = 70/104 (67%), Positives = 84/104 (80%)
 Frame = -1

Query: 316 RVRELKKKGAPDNAITLMLVGIPNVGKSALANSLHLVGRITAAEKGKLRRSVITPYPGET 137
           +V+ +KK        T+MLVGIPNVGKSALANSLH +GRI+AAEKGKL+ + ++P PGET
Sbjct: 119 QVKGVKKIDHSSYTATIMLVGIPNVGKSALANSLHQIGRISAAEKGKLKHATVSPIPGET 178

Query: 136 KSIISLKIASHPNIYVLDTPGVLPPDVNSYEVCSKLALTGAIKD 5
           + I SLKI SHPN+YVLDTPG+LPPD+    VCSKLALTGAIKD
Sbjct: 179 RDISSLKIGSHPNVYVLDTPGILPPDILDVVVCSKLALTGAIKD 222


>ref|NP_192803.4| GTP binding protein [Arabidopsis thaliana]
           gi|3600035|gb|AAC35523.1| contains similarity to
           GTP-binding proteins [Arabidopsis thaliana]
           gi|332657513|gb|AEE82913.1| GTP binding protein
           [Arabidopsis thaliana]
          Length = 377

 Score =  141 bits (356), Expect = 5e-32
 Identities = 66/104 (63%), Positives = 85/104 (81%)
 Frame = -1

Query: 316 RVRELKKKGAPDNAITLMLVGIPNVGKSALANSLHLVGRITAAEKGKLRRSVITPYPGET 137
           +VREL K G   +  T+ML+GIPNVGKSAL+NSLH +GRI+AAEKGKL+ + ++  PG+T
Sbjct: 127 QVRELHKAGHSGHTTTMMLLGIPNVGKSALSNSLHHIGRISAAEKGKLKHTTVSSQPGDT 186

Query: 136 KSIISLKIASHPNIYVLDTPGVLPPDVNSYEVCSKLALTGAIKD 5
           K I+SLKI SHPN+YVLDTPG+ PP++   E+C+KLALTGAI D
Sbjct: 187 KDIMSLKIGSHPNVYVLDTPGIFPPNLYDAEICAKLALTGAIPD 230


>ref|XP_002526350.1| GTP binding protein, putative [Ricinus communis]
           gi|223534309|gb|EEF36021.1| GTP binding protein,
           putative [Ricinus communis]
          Length = 373

 Score =  133 bits (334), Expect = 2e-29
 Identities = 70/111 (63%), Positives = 81/111 (72%), Gaps = 7/111 (6%)
 Frame = -1

Query: 316 RVRELKKKGAPDNAITLMLVGIPNVGKSALANSLHLVGRITAAEKGKLRRSVITPYPGET 137
           +VR LK        IT+M+VGIPNVGKSALA SLH +GRI+AAEKGKL+ + +TP+PGET
Sbjct: 119 QVRGLKNIDHSGCTITMMMVGIPNVGKSALAKSLHHIGRISAAEKGKLKHAKVTPHPGET 178

Query: 136 KSIISLK-------IASHPNIYVLDTPGVLPPDVNSYEVCSKLALTGAIKD 5
           K I SLK       I SHPNIYVLDTPGVLPP +   EVC KLALTG  +D
Sbjct: 179 KDISSLKACSLSLIIGSHPNIYVLDTPGVLPPQIFDAEVCFKLALTGTFRD 229


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