BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00014458
         (1612 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270559.1| PREDICTED: DNA-directed RNA polymerases I an...   624   e-176
ref|XP_002522786.1| DNA-directed RNA polymerase I/III subunits, ...   563   e-158
ref|XP_004148257.1| PREDICTED: DNA-directed RNA polymerases I an...   554   e-155
ref|XP_002300385.1| predicted protein [Populus trichocarpa] gi|2...   530   e-148
ref|XP_002888129.1| ATRPAC43 [Arabidopsis lyrata subsp. lyrata] ...   520   e-145

>ref|XP_002270559.1| PREDICTED: DNA-directed RNA polymerases I and III subunit RPAC1
            [Vitis vinifera] gi|296089944|emb|CBI39763.3| unnamed
            protein product [Vitis vinifera]
          Length = 372

 Score =  624 bits (1609), Expect = e-176
 Identities = 301/368 (81%), Positives = 335/368 (91%), Gaps = 1/368 (0%)
 Frame = -2

Query: 1509 PVWDLPDVPKGELPPHIQLQRTRVLCTLDAPTHTENIRYSGAYAAMGVDNSLRLEEFRNN 1330
            P  D+PDVPKG+LPPHI+LQRTRVLC  DAPTHTEN++YSGAY++MGVDNSLR+++F NN
Sbjct: 5    PALDMPDVPKGQLPPHIELQRTRVLCNFDAPTHTENVQYSGAYSSMGVDNSLRMDQFCNN 64

Query: 1329 FKVEVIRLTEDDMEFDMIGIDAALANAFRRILIAEIPTMAIEKVLFANNTSVIQDEVLAH 1150
            F+VEVIRL+EDDMEFDMIGID ++ANAFRRILIAE+PTMAIEKVL ANNTS++QDEVLAH
Sbjct: 65   FRVEVIRLSEDDMEFDMIGIDPSIANAFRRILIAELPTMAIEKVLIANNTSIVQDEVLAH 124

Query: 1149 RLGLIPLQVDPRHFNFISENDEPNEKNTIVFKLHVNCERGSSRIEVKSSELNWLPGGSEF 970
            RLGLIP+  DPR F+ +SEND PNEKNTIVF LHV CERG  R+ VKS+EL WLP GSEF
Sbjct: 125  RLGLIPINADPRLFDDLSENDTPNEKNTIVFNLHVRCERGGPRLTVKSNELKWLPHGSEF 184

Query: 969  PL-TENSTTDSTSKIKTYTSFSCGQDTLPEFQDNPIAPKHDDIILAKLGAGQEIELEAHA 793
            PL TEN+T+ STSK KTYTSFSC QD+LPEF D  I PKH DII+AKLG GQEIELEAHA
Sbjct: 185  PLATENTTSSSTSKPKTYTSFSCSQDSLPEFSDKSIGPKHPDIIIAKLGPGQEIELEAHA 244

Query: 792  VKGMGKTHAKWSPVATAWYRMLPEVVLLQEIEGEKAEQLVKKCPVKVFDIEDIAEGRKRA 613
            VKGMGKTHAKWSPVATAWYRMLPEVVLLQEIE EKAE+LVKKCPV VFDIEDIA+G+K+A
Sbjct: 245  VKGMGKTHAKWSPVATAWYRMLPEVVLLQEIEDEKAEELVKKCPVNVFDIEDIAKGKKKA 304

Query: 612  TVARPRSCTLCRECIRGDDWEKLVALRRVKNHFIFTIESTGALPPEVLFTEAVKILEDKC 433
            TVARPR+CTLCRECIRGDDW+K VA+RRVKNHFIFTIESTGALPPEVLF EAVK+LEDKC
Sbjct: 305  TVARPRACTLCRECIRGDDWDKHVAIRRVKNHFIFTIESTGALPPEVLFNEAVKVLEDKC 364

Query: 432  ERVITELS 409
            ERVITELS
Sbjct: 365  ERVITELS 372


>ref|XP_002522786.1| DNA-directed RNA polymerase I/III subunits, putative [Ricinus
            communis] gi|223538024|gb|EEF39637.1| DNA-directed RNA
            polymerase I/III subunits, putative [Ricinus communis]
          Length = 374

 Score =  563 bits (1451), Expect = e-158
 Identities = 280/381 (73%), Positives = 322/381 (84%)
 Frame = -2

Query: 1551 MVSDKKESGKTPKIPVWDLPDVPKGELPPHIQLQRTRVLCTLDAPTHTENIRYSGAYAAM 1372
            M S ++   K  K  +WDLPDVP G+LPPH+QLQRTRV+C  DAP HT+NI YSGAYA++
Sbjct: 1    MSSKQENKEKNKKFSIWDLPDVPMGQLPPHLQLQRTRVVCKSDAPIHTDNIVYSGAYASI 60

Query: 1371 GVDNSLRLEEFRNNFKVEVIRLTEDDMEFDMIGIDAALANAFRRILIAEIPTMAIEKVLF 1192
            GVDNSL+L+ FR+NFKVEVI+LT+DDMEFDMIGIDAA+ANAFRRILI+E+PTMAIEKVL 
Sbjct: 61   GVDNSLQLDCFRDNFKVEVIQLTKDDMEFDMIGIDAAIANAFRRILISELPTMAIEKVLI 120

Query: 1191 ANNTSVIQDEVLAHRLGLIPLQVDPRHFNFISENDEPNEKNTIVFKLHVNCERGSSRIEV 1012
            ANNTS+IQDEVLAHRLGLIP+  DPR F ++S ND PNEKNTIVFKLH +C+RG  R  V
Sbjct: 121  ANNTSLIQDEVLAHRLGLIPINADPRLFEYLSANDTPNEKNTIVFKLHASCKRGEPRRTV 180

Query: 1011 KSSELNWLPGGSEFPLTENSTTDSTSKIKTYTSFSCGQDTLPEFQDNPIAPKHDDIILAK 832
             S EL WLPGGS+  L E+   D  SK  TYTSF+  QD +P+    P++P  D II+AK
Sbjct: 181  YSEELKWLPGGSQL-LKESEKAD--SKPSTYTSFTDKQDFIPK----PVSPSEDKIIVAK 233

Query: 831  LGAGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLQEIEGEKAEQLVKKCPVKV 652
            LG GQEIELEAHAVKG+GKTHAKWSPVATAWYRMLPEVVLL++IE E AE+L KKCPV V
Sbjct: 234  LGPGQEIELEAHAVKGLGKTHAKWSPVATAWYRMLPEVVLLEDIEDEIAEELTKKCPVNV 293

Query: 651  FDIEDIAEGRKRATVARPRSCTLCRECIRGDDWEKLVALRRVKNHFIFTIESTGALPPEV 472
            FDIEDI  G+KRATVARPR+CTLCRECIRG +W+K V+LRRVK+HFIFTIESTGALPPEV
Sbjct: 294  FDIEDIGNGKKRATVARPRACTLCRECIRGGEWDKRVSLRRVKDHFIFTIESTGALPPEV 353

Query: 471  LFTEAVKILEDKCERVITELS 409
            LFTEAVK+LEDKCERVITELS
Sbjct: 354  LFTEAVKVLEDKCERVITELS 374


>ref|XP_004148257.1| PREDICTED: DNA-directed RNA polymerases I and III subunit RPAC1-like
            [Cucumis sativus] gi|449522768|ref|XP_004168398.1|
            PREDICTED: DNA-directed RNA polymerases I and III subunit
            RPAC1-like [Cucumis sativus]
          Length = 391

 Score =  554 bits (1428), Expect = e-155
 Identities = 279/367 (76%), Positives = 313/367 (85%), Gaps = 1/367 (0%)
 Frame = -2

Query: 1506 VWDLPDVPKGELPPHIQLQRTRVLCTLDAPTHTENIRYSGAYAAMGVDNSLRLEEFRNNF 1327
            + +LPDVP  +LPPH++LQRTRV C  DAP HT+ I+YSGA+A+MG DNSLRL+ FRNNF
Sbjct: 29   IMNLPDVPM-KLPPHVELQRTRVECKADAPIHTDTIQYSGAFASMGFDNSLRLDNFRNNF 87

Query: 1326 KVEVIRLTEDDMEFDMIGIDAALANAFRRILIAEIPTMAIEKVLFANNTSVIQDEVLAHR 1147
            K+EVI L EDD+EFDMIGID ALANAFRRILI+E+PTMAIEKVLFANNTS++QDEVLAHR
Sbjct: 88   KIEVIDLKEDDIEFDMIGIDPALANAFRRILISEVPTMAIEKVLFANNTSIVQDEVLAHR 147

Query: 1146 LGLIPLQVDPRHFNFISENDEPNEKNTIVFKLHVNCERGSSRIEVKSSELNWLPGGSEFP 967
            LGL+P++VDPR F + S+ D PNE NTIVF+LH  CERG  R+ V S  L WLP GSEFP
Sbjct: 148  LGLVPIRVDPRLFKY-SDKDAPNENNTIVFRLHACCERGKPRLTVTSKALTWLPNGSEFP 206

Query: 966  LTENSTTDSTSKIKTYTSFSCGQDTL-PEFQDNPIAPKHDDIILAKLGAGQEIELEAHAV 790
            L  + +  S SK KTYTSFSC Q+TL  EF +NPI PK  DIILA+LG GQEIELEAHAV
Sbjct: 207  LVSDKSV-SNSKPKTYTSFSCSQNTLSKEFSNNPIGPKDSDIILARLGPGQEIELEAHAV 265

Query: 789  KGMGKTHAKWSPVATAWYRMLPEVVLLQEIEGEKAEQLVKKCPVKVFDIEDIAEGRKRAT 610
            KGMGKTHAKWSPVATAWYRMLPEVVL++EIE E AE+L KKCPV VFDIEDIA G+KRAT
Sbjct: 266  KGMGKTHAKWSPVATAWYRMLPEVVLMEEIEDELAEELEKKCPVNVFDIEDIA-GKKRAT 324

Query: 609  VARPRSCTLCRECIRGDDWEKLVALRRVKNHFIFTIESTGALPPEVLFTEAVKILEDKCE 430
            VARPR CTLCRECIRGD WEK VALRRVK+HFIF IESTGALPPEVLFTEAVKILEDKCE
Sbjct: 325  VARPRDCTLCRECIRGDAWEKRVALRRVKDHFIFKIESTGALPPEVLFTEAVKILEDKCE 384

Query: 429  RVITELS 409
            R+I ELS
Sbjct: 385  RLIAELS 391


>ref|XP_002300385.1| predicted protein [Populus trichocarpa] gi|222847643|gb|EEE85190.1|
            predicted protein [Populus trichocarpa]
          Length = 390

 Score =  530 bits (1366), Expect = e-148
 Identities = 268/379 (70%), Positives = 307/379 (81%), Gaps = 1/379 (0%)
 Frame = -2

Query: 1542 DKKESGKTPKIPVWDLPDVPKGELPPHIQLQRTRVLCTLDAPTHTENIRYSGAYAAMGVD 1363
            ++++  K      W+L DV +G+LPPHI+ Q TRV C  DAPT+TE ++YSG+YA+MGVD
Sbjct: 16   EEEQQQKEEGFSYWNLKDVERGQLPPHIRKQGTRVYCKPDAPTNTETLQYSGSYASMGVD 75

Query: 1362 NSLRLEEFRNNFKVEVIRLTEDDMEFDMIGIDAALANAFRRILIAEIPTMAIEKVLFANN 1183
            NSLRL+ FR NF+++VI L +D MEFDMIGIDAA+ANAFRRILI+E+PTMAIEKV  ANN
Sbjct: 76   NSLRLDSFRENFRIKVIALDKDKMEFDMIGIDAAVANAFRRILISEVPTMAIEKVFIANN 135

Query: 1182 TSVIQDEVLAHRLGLIPLQVDPRHFNFISENDEPNEKNTIVFKLHVNCERGSSRIEVKSS 1003
            TSVIQDEVLAHRLGLIP++VDPR F ++S ND PNEKNTIV KLH  C RG  R  V S 
Sbjct: 136  TSVIQDEVLAHRLGLIPIKVDPRLFEYLSANDTPNEKNTIVLKLHARCNRGQPRCSVYSQ 195

Query: 1002 ELNWLPGGSEFPLTENSTTDSTSKIKTYTSFSCGQDTLPEFQDNPIAPKHDDIILAKLGA 823
            EL WLP GSEF   E+   D  SK  TYTSFSCGQD+LPEF  NPI+   +DIILAKLG 
Sbjct: 196  ELKWLPNGSEF-AKESEKPD--SKPSTYTSFSCGQDSLPEFAGNPISTV-EDIILAKLGP 251

Query: 822  GQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLQEIEGEKAEQLVKKCPVKVFDI 643
            GQEIELEAHAVKGMGKTHAKWSPV TAWYRM PEVVLL+ I+GE AE+L++KCP  VFDI
Sbjct: 252  GQEIELEAHAVKGMGKTHAKWSPVGTAWYRMFPEVVLLENIKGEDAEELIRKCPSGVFDI 311

Query: 642  EDIAEGRKRATVARPRSCTLCRECIRGD-DWEKLVALRRVKNHFIFTIESTGALPPEVLF 466
            ED    +K+A VA  R+CTLCRECIRGD +WEK VAL RVK+HFIFTIESTGALPPEVLF
Sbjct: 312  EDTGNAKKKAIVADSRACTLCRECIRGDEEWEKRVALHRVKDHFIFTIESTGALPPEVLF 371

Query: 465  TEAVKILEDKCERVITELS 409
            TEAVKILE KCERVITELS
Sbjct: 372  TEAVKILEAKCERVITELS 390


>ref|XP_002888129.1| ATRPAC43 [Arabidopsis lyrata subsp. lyrata]
            gi|297333970|gb|EFH64388.1| ATRPAC43 [Arabidopsis lyrata
            subsp. lyrata]
          Length = 385

 Score =  520 bits (1340), Expect = e-145
 Identities = 260/367 (70%), Positives = 300/367 (81%), Gaps = 1/367 (0%)
 Frame = -2

Query: 1506 VWDLPDVPKGELPPHIQLQRTRVLCTLDAPTHTENIRYSGAYAAMGVDNSLRLEEFRNNF 1327
            ++DLPDVP G LPPH++LQRTR +C  DAP H  ++ YSGAYA+MGVDNS+RLE F  +F
Sbjct: 23   IFDLPDVPTG-LPPHLELQRTRAVCKNDAPIHPTSVLYSGAYASMGVDNSVRLENFSEDF 81

Query: 1326 KVEVIRLTEDDMEFDMIGIDAALANAFRRILIAEIPTMAIEKVLFANNTSVIQDEVLAHR 1147
            KV+VI LTE  M FDMIG+ A +ANAFRRIL+AE+P+MAIEKV  ANNTSVIQDEVLAHR
Sbjct: 82   KVDVISLTETYMVFDMIGVPAGIANAFRRILLAELPSMAIEKVFVANNTSVIQDEVLAHR 141

Query: 1146 LGLIPLQVDPRHFNFISENDEPNEKNTIVFKLHVNCERGSSRIEVKSSELNWLPGGSEFP 967
            LGLIP+  DPR F ++SEND+PNEKNTIVFKLHV C +G  R +V +SEL WLP GSE  
Sbjct: 142  LGLIPIAADPRLFEYLSENDQPNEKNTIVFKLHVKCPKGDPRRKVLTSELKWLPNGSEL- 200

Query: 966  LTENSTTDSTSKIKTYTSFSCGQDTLPEFQDNPIAPKHDDIILAKLGAGQEIELEAHAVK 787
                 +   T+K KTYTSFS  QD+ P F  NPI P   DI++AKLG GQEIELEAHAVK
Sbjct: 201  --VKESGGLTTKPKTYTSFSHSQDSFPGFAKNPITPSFQDILIAKLGPGQEIELEAHAVK 258

Query: 786  GMGKTHAKWSPVATAWYRMLPEVVLLQEIEGEKAEQLVKKCPVKVFDIEDIAEGRKRATV 607
            G+GKTHAKWSPVATAWYRMLPEV+LL+E EG+ AE+LVK CP KVFDIED+ +GRKRATV
Sbjct: 259  GIGKTHAKWSPVATAWYRMLPEVILLKEFEGKHAEELVKVCPKKVFDIEDMGQGRKRATV 318

Query: 606  ARPRSCTLCRECIR-GDDWEKLVALRRVKNHFIFTIESTGALPPEVLFTEAVKILEDKCE 430
            ARPR C+LCRECIR G +W K V LRRVKNHFIFTIESTG+ PP+VLF EAVKILEDKCE
Sbjct: 319  ARPRDCSLCRECIREGVEWAKQVDLRRVKNHFIFTIESTGSQPPDVLFNEAVKILEDKCE 378

Query: 429  RVITELS 409
            RVI+ELS
Sbjct: 379  RVISELS 385