BLASTX nr result

ID: Scutellaria24_contig00014362 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00014362
         (683 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003548358.1| PREDICTED: DNA topoisomerase 2-binding prote...   144   2e-32
emb|CBI18968.3| unnamed protein product [Vitis vinifera]              142   6e-32
ref|XP_002284611.2| PREDICTED: DNA topoisomerase 2-binding prote...   135   8e-30
ref|XP_002520311.1| topbp1, putative [Ricinus communis] gi|22354...   116   4e-24
dbj|BAJ53188.1| JMS09K11.6 [Jatropha curcas]                          112   5e-23

>ref|XP_003548358.1| PREDICTED: DNA topoisomerase 2-binding protein 1-A-like [Glycine max]
          Length = 970

 Score =  144 bits (362), Expect = 2e-32
 Identities = 76/142 (53%), Positives = 103/142 (72%), Gaps = 2/142 (1%)
 Frame = -2

Query: 652  STTDINANGKNHKDNNVTENIREVSSVVPDVAAAIEDLLEQTNKIQDWKSQETSGCHENF 473
            S + I+A+ KN   +N+  +  E    VPDVAAAIEDLLEQT+K+ D +S   +GC  + 
Sbjct: 828  SNSGIHADDKNFSKDNMLIDAGEAFHAVPDVAAAIEDLLEQTSKMHDQRSPAQTGCERSI 887

Query: 472  LSSNPTMLSQSHAES-TDPGPSKHWVNRSDKRDENPSAAETTR-GLYDGFSETQTDSQVV 299
              S+ ++LS+ ++   T  G SKHW+NRS ++D+N  A++  R G+YDGFSETQT+SQVV
Sbjct: 888  YPSDRSVLSEDNSNPHTVFGLSKHWLNRSGRKDDNGEASQDRRAGIYDGFSETQTESQVV 947

Query: 298  GYEEDLSGRQMIIDRVRTRSSM 233
             YEEDLSGRQM+IDRVRTRSS+
Sbjct: 948  SYEEDLSGRQMLIDRVRTRSSL 969


>emb|CBI18968.3| unnamed protein product [Vitis vinifera]
          Length = 952

 Score =  142 bits (358), Expect = 6e-32
 Identities = 79/133 (59%), Positives = 93/133 (69%), Gaps = 3/133 (2%)
 Frame = -2

Query: 622  NHKDNNVTENIREVSSVVPDVAAAIEDLLEQTNKIQDWKSQETSGCHENFLSSNPTMLSQ 443
            N     +T    E S VVPDVAAAIEDLLEQT+KI D KS   +GC ++  SS+ + L Q
Sbjct: 820  NSSGTTITAVTEETSHVVPDVAAAIEDLLEQTSKIHDLKSPGRTGCEKHLFSSDCSPLGQ 879

Query: 442  SHAESTDPGP-SKHWVNRSDKRDE--NPSAAETTRGLYDGFSETQTDSQVVGYEEDLSGR 272
             HA+S      SKHW+NR +K+D+  NP   +     YDGFSETQT+SQVVGYEEDLSGR
Sbjct: 880  DHADSHSSFDLSKHWLNRIEKKDDICNPPG-DVKASTYDGFSETQTESQVVGYEEDLSGR 938

Query: 271  QMIIDRVRTRSSM 233
            QMIIDRVRTRSSM
Sbjct: 939  QMIIDRVRTRSSM 951


>ref|XP_002284611.2| PREDICTED: DNA topoisomerase 2-binding protein 1-B-like [Vitis
            vinifera]
          Length = 962

 Score =  135 bits (340), Expect = 8e-30
 Identities = 80/143 (55%), Positives = 92/143 (64%), Gaps = 13/143 (9%)
 Frame = -2

Query: 622  NHKDNNVTENIREVSSVVPDVAAAIEDLLEQTNKIQDWKSQETSGCH----------ENF 473
            N     +T    E S VVPDVAAAIEDLLEQT+KI D KS   +GC           E  
Sbjct: 820  NSSGTTITAVTEETSHVVPDVAAAIEDLLEQTSKIHDLKSPGRTGCEKHVSLESLTIEQL 879

Query: 472  LSSNPTMLSQSHAESTDPGP-SKHWVNRSDKRDE--NPSAAETTRGLYDGFSETQTDSQV 302
             SS+ + L Q HA+S      SKHW+NR +K+D+  NP   +     YDGFSETQT+SQV
Sbjct: 880  FSSDCSPLGQDHADSHSSFDLSKHWLNRIEKKDDICNPPG-DVKASTYDGFSETQTESQV 938

Query: 301  VGYEEDLSGRQMIIDRVRTRSSM 233
            VGYEEDLSGRQMIIDRVRTRSSM
Sbjct: 939  VGYEEDLSGRQMIIDRVRTRSSM 961


>ref|XP_002520311.1| topbp1, putative [Ricinus communis] gi|223540530|gb|EEF42097.1|
            topbp1, putative [Ricinus communis]
          Length = 950

 Score =  116 bits (291), Expect = 4e-24
 Identities = 76/143 (53%), Positives = 89/143 (62%), Gaps = 13/143 (9%)
 Frame = -2

Query: 622  NHKDNNVTENIREVSSVVPDVAAAIEDLLEQTNKIQDWKSQETSGCH----------ENF 473
            N    N +++    S  VPDVAAAIEDLLEQT+KI D KS   S             E  
Sbjct: 809  NSTRGNDSKDTAGSSHGVPDVAAAIEDLLEQTSKIHDQKSLGKSEYSMFASVESLTIEQL 868

Query: 472  LSSNPTMLSQSHAESTDP-GPSKHWVNRSDKRDE--NPSAAETTRGLYDGFSETQTDSQV 302
              S+P +L + H  S    G   HW+NR+ KRD+  NPS  E  RG+YD F+ETQT+SQV
Sbjct: 869  YPSDP-ILGEDHGGSHSVIGVPNHWLNRTGKRDDLSNPSR-EVNRGVYDNFTETQTESQV 926

Query: 301  VGYEEDLSGRQMIIDRVRTRSSM 233
            V YEEDLSGRQMIIDRVRTRSSM
Sbjct: 927  VLYEEDLSGRQMIIDRVRTRSSM 949


>dbj|BAJ53188.1| JMS09K11.6 [Jatropha curcas]
          Length = 918

 Score =  112 bits (281), Expect = 5e-23
 Identities = 72/144 (50%), Positives = 86/144 (59%), Gaps = 3/144 (2%)
 Frame = -2

Query: 655  DSTTDINANGKNHKDNNVTENIREVSSVVPDVAAAIEDLLEQTNKIQDWKSQETSGCHEN 476
            DS  +IN++G N+  +N     +E SS V DVAA IEDLLEQT+KI D KS E +   EN
Sbjct: 804  DSICNINSSGGNNSKDN-----KESSSCVSDVAAVIEDLLEQTSKIHDHKSPERTQHDEN 858

Query: 475  FLSSNPTMLSQSHAESTDPGPSKHWVNRSDKRDENPSAAET---TRGLYDGFSETQTDSQ 305
                                     V+   KRDE  + A +     G+YDGFSETQTDSQ
Sbjct: 859  -------------------------VSLPGKRDELSTPASSKDGNNGMYDGFSETQTDSQ 893

Query: 304  VVGYEEDLSGRQMIIDRVRTRSSM 233
            VVGYEEDLSGRQM+IDRVRTRSS+
Sbjct: 894  VVGYEEDLSGRQMLIDRVRTRSSI 917


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