BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00014276
         (1391 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003605589.1| Cytochrome b559 subunit alpha [Medicago trun...   190   8e-67
ref|XP_002888378.1| hypothetical protein ARALYDRAFT_894035 [Arab...   162   6e-60
ref|XP_003606015.1| Cytochrome b559 subunit alpha [Medicago trun...   168   1e-59
prf||1011228A cytochrome b559                                         170   6e-57
pir||T14570 cytochrome b559 component psbE - beet chloroplast gi...   192   2e-46

>ref|XP_003605589.1| Cytochrome b559 subunit alpha [Medicago truncatula]
            gi|355506644|gb|AES87786.1| Cytochrome b559 subunit alpha
            [Medicago truncatula]
          Length = 153

 Score =  190 bits (482), Expect(2) = 8e-67
 Identities = 99/132 (75%), Positives = 102/132 (77%), Gaps = 1/132 (0%)
 Frame = -1

Query: 1211 MSGSTGERSFADIITSIRYWVIHSITIPSLFIAGWLFVSTGLAYDVFGSPRPNEYFTESR 1032
            MSGSTGERSFADIITSIRYW+IHSITIPSLFIAGWLFVSTGLAYDVFGSPRPNEYFTESR
Sbjct: 1    MSGSTGERSFADIITSIRYWIIHSITIPSLFIAGWLFVSTGLAYDVFGSPRPNEYFTESR 60

Query: 1031 QGIPLITGRFDSLEQLDEFSRSF*EALIK*L*IEPIQFLQYDGWLFTA*LYLPS-FFWGQ 855
            QGIPLITGRFDSLEQLDEF R                      WL    L +P+ FFW Q
Sbjct: 61   QGIPLITGRFDSLEQLDEFIR----------------------WLAVHGLAVPTVFFWDQ 98

Query: 854  YQQCSSSNDKPN 819
            YQQCSSSNDKPN
Sbjct: 99   YQQCSSSNDKPN 110



 Score = 92.0 bits (227), Expect(2) = 8e-67
 Identities = 43/43 (100%), Positives = 43/43 (100%)
 Frame = -2

Query: 817 PNYRAMTQSNPNEQNVELNRTSLYWGLLLIFVLAVLFSNYFFN 689
           PNYRAMTQSNPNEQNVELNRTSLYWGLLLIFVLAVLFSNYFFN
Sbjct: 111 PNYRAMTQSNPNEQNVELNRTSLYWGLLLIFVLAVLFSNYFFN 153


>ref|XP_002888378.1| hypothetical protein ARALYDRAFT_894035 [Arabidopsis lyrata subsp.
            lyrata] gi|297334219|gb|EFH64637.1| hypothetical protein
            ARALYDRAFT_894035 [Arabidopsis lyrata subsp. lyrata]
          Length = 136

 Score =  162 bits (411), Expect(3) = 6e-60
 Identities = 79/81 (97%), Positives = 79/81 (97%)
 Frame = -1

Query: 1211 MSGSTGERSFADIITSIRYWVIHSITIPSLFIAGWLFVSTGLAYDVFGSPRPNEYFTESR 1032
            MSGSTGERSFADIITSIRYWVIHSITIPSLFIAGWLFVSTGLAYDVFGSPRPNEYFTESR
Sbjct: 1    MSGSTGERSFADIITSIRYWVIHSITIPSLFIAGWLFVSTGLAYDVFGSPRPNEYFTESR 60

Query: 1031 QGIPLITGRFDSLEQLDEFSR 969
            QGIPLITGRFD LEQLDEF R
Sbjct: 61   QGIPLITGRFDPLEQLDEFMR 81



 Score = 79.0 bits (193), Expect(3) = 6e-60
 Identities = 37/39 (94%), Positives = 38/39 (97%)
 Frame = -2

Query: 805 AMTQSNPNEQNVELNRTSLYWGLLLIFVLAVLFSNYFFN 689
           AMTQSNPNEQ+VELNRTSLYWGLL IFVLAVLFSNYFFN
Sbjct: 98  AMTQSNPNEQSVELNRTSLYWGLLFIFVLAVLFSNYFFN 136



 Score = 38.5 bits (88), Expect(3) = 6e-60
 Identities = 16/21 (76%), Positives = 20/21 (95%)
 Frame = -3

Query: 912 VRWLAVHGLAVPTVFFLGSIS 850
           +RWLAVHGLAVPTV FLG+++
Sbjct: 80  MRWLAVHGLAVPTVSFLGAMT 100


>ref|XP_003606015.1| Cytochrome b559 subunit alpha [Medicago truncatula]
            gi|355507070|gb|AES88212.1| Cytochrome b559 subunit alpha
            [Medicago truncatula]
          Length = 136

 Score =  168 bits (425), Expect(2) = 1e-59
 Identities = 91/131 (69%), Positives = 92/131 (70%)
 Frame = -1

Query: 1211 MSGSTGERSFADIITSIRYWVIHSITIPSLFIAGWLFVSTGLAYDVFGSPRPNEYFTESR 1032
            MSGSTGERSFADIITSIRYW+IHSITIPSLFIAGWLFVSTGLAYDVFGSPRPNEYFTESR
Sbjct: 1    MSGSTGERSFADIITSIRYWIIHSITIPSLFIAGWLFVSTGLAYDVFGSPRPNEYFTESR 60

Query: 1031 QGIPLITGRFDSLEQLDEFSRSF*EALIK*L*IEPIQFLQYDGWLFTA*LYLPSFFWGQY 852
            QGIPLITGRFDSLEQLDEF R                      WL               
Sbjct: 61   QGIPLITGRFDSLEQLDEFIR----------------------WL--------------- 83

Query: 851  QQCSSSNDKPN 819
             QCSSSNDKPN
Sbjct: 84   -QCSSSNDKPN 93



 Score = 89.7 bits (221), Expect(2) = 1e-59
 Identities = 42/43 (97%), Positives = 42/43 (97%)
 Frame = -2

Query: 817 PNYRAMTQSNPNEQNVELNRTSLYWGLLLIFVLAVLFSNYFFN 689
           PNYRA TQSNPNEQNVELNRTSLYWGLLLIFVLAVLFSNYFFN
Sbjct: 94  PNYRATTQSNPNEQNVELNRTSLYWGLLLIFVLAVLFSNYFFN 136


>prf||1011228A cytochrome b559
          Length = 122

 Score =  170 bits (431), Expect(2) = 6e-57
 Identities = 83/83 (100%), Positives = 83/83 (100%)
 Frame = -1

Query: 1211 MSGSTGERSFADIITSIRYWVIHSITIPSLFIAGWLFVSTGLAYDVFGSPRPNEYFTESR 1032
            MSGSTGERSFADIITSIRYWVIHSITIPSLFIAGWLFVSTGLAYDVFGSPRPNEYFTESR
Sbjct: 1    MSGSTGERSFADIITSIRYWVIHSITIPSLFIAGWLFVSTGLAYDVFGSPRPNEYFTESR 60

Query: 1031 QGIPLITGRFDSLEQLDEFSRSF 963
            QGIPLITGRFDSLEQLDEFSRSF
Sbjct: 61   QGIPLITGRFDSLEQLDEFSRSF 83



 Score = 78.6 bits (192), Expect(2) = 6e-57
 Identities = 37/39 (94%), Positives = 38/39 (97%)
 Frame = -3

Query: 945 MTIDRTYPIFTVRWLAVHGLAVPTVFFLGSISAMQFIQR 829
           MTIDRTYPIFTVRWLA+HGLAVPTV FLGSISAMQFIQR
Sbjct: 84  MTIDRTYPIFTVRWLAIHGLAVPTVSFLGSISAMQFIQR 122


>pir||T14570 cytochrome b559 component psbE - beet chloroplast
            gi|860891|emb|CAA60967.1| PSII cytochome b559 alpha chain
            [Beta vulgaris subsp. vulgaris] gi|860897|emb|CAA60972.1|
            PSII cytochrome b599 alpha chain [Beta vulgaris subsp.
            vulgaris]
          Length = 118

 Score =  192 bits (487), Expect = 2e-46
 Identities = 99/116 (85%), Positives = 103/116 (88%), Gaps = 4/116 (3%)
 Frame = -1

Query: 1298 DPISVIAFY*SHLLWNRS----PLTVQEYVELSMSGSTGERSFADIITSIRYWVIHSITI 1131
            +P  ++ FY +  L   S    PLTVQEYVELSMSGSTGERSFADIITSIRYWVIHSITI
Sbjct: 3    NPTRILRFYVNGNLLISSFTDLPLTVQEYVELSMSGSTGERSFADIITSIRYWVIHSITI 62

Query: 1130 PSLFIAGWLFVSTGLAYDVFGSPRPNEYFTESRQGIPLITGRFDSLEQLDEFSRSF 963
            PSLFIAGWLFVSTGLAYDVFGSPRPNEYFTESRQGIPLITGRFDSLEQLDEFSRSF
Sbjct: 63   PSLFIAGWLFVSTGLAYDVFGSPRPNEYFTESRQGIPLITGRFDSLEQLDEFSRSF 118