BLASTX nr result

ID: Scutellaria24_contig00014211 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00014211
         (1213 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN79659.1| hypothetical protein VITISV_014509 [Vitis vinifera]   303   4e-80
ref|XP_002279844.1| PREDICTED: poly(A) polymerase [Vitis vinifer...   302   1e-79
ref|XP_002519259.1| poly(A) polymerase, putative [Ricinus commun...   284   3e-74
gb|AAP86215.1| poly(A) polymerase [Arabidopsis thaliana]              273   6e-71
ref|XP_002882480.1| polynucleotide adenylyltransferase [Arabidop...   272   1e-70

>emb|CAN79659.1| hypothetical protein VITISV_014509 [Vitis vinifera]
          Length = 604

 Score =  303 bits (777), Expect = 4e-80
 Identities = 169/364 (46%), Positives = 231/364 (63%), Gaps = 7/364 (1%)
 Frame = -2

Query: 1212 SETDVLCIGPCFASMAEDFFVDLRDML-AXXXXXXXXXXXSARLPLLRFKFEGISVNLYY 1036
            S+ D LC+GP FASMA+DFF+ LR+ML +            A++PL+RFKF+GISV+L Y
Sbjct: 190  SDIDALCVGPFFASMADDFFIVLRNMLESRPEVSEIHCVKDAKVPLMRFKFDGISVDLPY 249

Query: 1035 GKIRTAFVPRVW--YNPFYLENIDEVSSRSLSGAFLVQAILRVVPNFKAYQSLLRAVRFW 862
             +++  +VP      NP++L NIDE S +SLSG    + IL++VPN + +QS+LR ++ W
Sbjct: 250  AQLKLLYVPENLNVLNPYFLRNIDETSWKSLSGVRANECILQLVPNVENFQSILRCIKLW 309

Query: 861  AKRRGIYGKDVGFFGGVHLAVLAAFVCGRHPRCSLSVSVLIFFKTFAFWPWPKPVILTDG 682
            AKRRG+YG   G+FGGVHLA+LAAFVC ++P  +L+V +  FFKTF+ WPWP PV L DG
Sbjct: 310  AKRRGVYGNLFGYFGGVHLAILAAFVCQKNPHANLNVLMSSFFKTFSGWPWPTPVALEDG 369

Query: 681  VANLQPNDDLITRYKMPIQVPSITQNEYSYC--GTTRSTFTRIVKEFRKAYDKTLRLCGP 508
               L       TR  MPIQ+P    + Y YC    T+STF RI  E    +  T  L   
Sbjct: 370  --RLPTGGTRETRALMPIQLPC---SPYGYCHSNITKSTFYRITTELTLGHALTRDLLRL 424

Query: 507  VFEWEDIFKPFSYAKEFEFFLKICLSSTNQEELNEWVCHVKSRFSHLISILEEDVDICYP 328
             F+W DIF+PF Y+K++  F+KI LSS+NQ+EL +WV  VKSRF  L++ +EE   +C P
Sbjct: 425  DFDWNDIFEPFCYSKKYSRFIKIYLSSSNQDELGDWVGWVKSRFRFLLAKVEEVQGLCDP 484

Query: 327  DPRENTDIQLLKPNVVFHWGLISGGDDFSP-GSIKEAFMTNILS-EYDGPVGGMDLFKVE 154
            +P E  D    +PNVVF WG+  G  +FS    +++ FM NI +  Y GP G M+L  + 
Sbjct: 485  NPTEFIDPDAGEPNVVFFWGVQPGRINFSDIDVVEDDFMQNINNGGYQGPPGKMNLSVIP 544

Query: 153  RSGL 142
             S L
Sbjct: 545  TSQL 548


>ref|XP_002279844.1| PREDICTED: poly(A) polymerase [Vitis vinifera]
            gi|296083219|emb|CBI22855.3| unnamed protein product
            [Vitis vinifera]
          Length = 563

 Score =  302 bits (774), Expect = 1e-79
 Identities = 169/364 (46%), Positives = 230/364 (63%), Gaps = 7/364 (1%)
 Frame = -2

Query: 1212 SETDVLCIGPCFASMAEDFFVDLRDML-AXXXXXXXXXXXSARLPLLRFKFEGISVNLYY 1036
            S+ D LC+GP FASMA+DFF+ LR+ML +            A++PL+RFKF+GISV+L Y
Sbjct: 149  SDIDALCVGPFFASMADDFFIVLRNMLESRPEVSEIHCVKDAKVPLMRFKFDGISVDLPY 208

Query: 1035 GKIRTAFVPRVW--YNPFYLENIDEVSSRSLSGAFLVQAILRVVPNFKAYQSLLRAVRFW 862
             +++  +VP      NP++L NIDE S +SLSG    + IL++VPN + +QS+LR ++ W
Sbjct: 209  AQLKLLYVPENLNVLNPYFLRNIDETSWKSLSGVRANECILQLVPNVENFQSILRCIKLW 268

Query: 861  AKRRGIYGKDVGFFGGVHLAVLAAFVCGRHPRCSLSVSVLIFFKTFAFWPWPKPVILTDG 682
            AKRRG+YG   G+FGGVHLA+LAAFVC ++P  +L+V +  FFKTF+ WPWP PV L DG
Sbjct: 269  AKRRGVYGNLFGYFGGVHLAILAAFVCQKNPHANLNVLMSSFFKTFSGWPWPTPVALEDG 328

Query: 681  VANLQPNDDLITRYKMPIQVPSITQNEYSYC--GTTRSTFTRIVKEFRKAYDKTLRLCGP 508
               L       TR  MPIQ+P    + Y YC    T+STF RI  E    +  T  L   
Sbjct: 329  --RLPTGGTRETRALMPIQLPC---SPYGYCHSNITKSTFYRITTELTLGHALTRDLLRL 383

Query: 507  VFEWEDIFKPFSYAKEFEFFLKICLSSTNQEELNEWVCHVKSRFSHLISILEEDVDICYP 328
             F+W DIF+PF Y+K++  F+KI LSS+NQ+EL +WV  VKSRF  L++ +EE   +C P
Sbjct: 384  DFDWNDIFEPFCYSKKYSRFIKIYLSSSNQDELGDWVGWVKSRFRFLLAKVEEVQGLCDP 443

Query: 327  DPRENTDIQLLKPNVVFHWGLISGGDDFSP-GSIKEAFMTNILS-EYDGPVGGMDLFKVE 154
            +P E  D     PNVVF WG+  G  +FS    +++ FM NI +  Y GP G M+L  + 
Sbjct: 444  NPTEFIDPDAGGPNVVFFWGVQPGRINFSDIDVVEDDFMQNINNGGYQGPPGKMNLSVIP 503

Query: 153  RSGL 142
             S L
Sbjct: 504  TSQL 507


>ref|XP_002519259.1| poly(A) polymerase, putative [Ricinus communis]
            gi|223541574|gb|EEF43123.1| poly(A) polymerase, putative
            [Ricinus communis]
          Length = 492

 Score =  284 bits (727), Expect = 3e-74
 Identities = 157/362 (43%), Positives = 228/362 (62%), Gaps = 5/362 (1%)
 Frame = -2

Query: 1212 SETDVLCIGPCFASMAEDFFVDLRDMLAXXXXXXXXXXXS-ARLPLLRFKFEGISVNLYY 1036
            S+ D +C+GP FA++AEDFF+ LR+ML              A++PL+RFKF+GIS++L Y
Sbjct: 79   SDIDAICVGPFFATLAEDFFIVLRNMLKNRPEVSNIHCVKDAKVPLMRFKFDGISIDLPY 138

Query: 1035 GKIRTAFVPRV--WYNPFYLENIDEVSSRSLSGAFLVQAILRVVPNFKAYQSLLRAVRFW 862
             +++   VP      NPF+L NIDE S +SLSG    Q IL+ VPN + +QS+LR ++ W
Sbjct: 139  AQLKVLAVPDNVDMLNPFFLMNIDETSWKSLSGVRANQRILQFVPNLENFQSMLRCIKLW 198

Query: 861  AKRRGIYGKDVGFFGGVHLAVLAAFVCGRHPRCSLSVSVLIFFKTFAFWPWPKPVILTDG 682
            A+RRG+ G   GF GGVHLA+L+A VC ++P  S+S  +  FF T+A WPWP PV+L DG
Sbjct: 199  ARRRGVCGNLNGFLGGVHLAILSAVVCQKYPNASVSALISNFFATYATWPWPTPVMLQDG 258

Query: 681  VANLQPNDDLI-TRYKMPIQVPSITQNEYSYCGTTRSTFTRIVKEFRKAYDKTLRLCGPV 505
            +++  P +D I TR  MPI++P  + +EY +   T+ST+ RI  EF + +  T  L  P 
Sbjct: 259  MSS--PAEDFIETRSFMPIRLP-CSPHEYCHSNITKSTYYRIRTEFLRGHSLTKDLLKPD 315

Query: 504  FEWEDIFKPFSYAKEFEFFLKICLSSTNQEELNEWVCHVKSRFSHLISILEEDVDICYPD 325
            F+W  IF+PF Y+K++  F+KI LS+ +Q+E+ +WV  VKSRF  L+  LE     C P 
Sbjct: 316  FDWNGIFEPFPYSKKYTRFVKIYLSAPDQDEVGDWVGWVKSRFRALLLKLEGLQGQCDPS 375

Query: 324  PRENTDIQLLKPNVVFHWGLISGGDDF-SPGSIKEAFMTNILSEYDGPVGGMDLFKVERS 148
            P E  D  + +PNVVF+WGL     ++    S++E F+ NI S Y G    ++L  V+ +
Sbjct: 376  PVEYADRDVSEPNVVFYWGLNPSRSNYIDLESVEEDFLRNIYSGYHGTRRKLELSIVKAA 435

Query: 147  GL 142
             L
Sbjct: 436  EL 437


>gb|AAP86215.1| poly(A) polymerase [Arabidopsis thaliana]
          Length = 483

 Score =  273 bits (698), Expect = 6e-71
 Identities = 160/364 (43%), Positives = 221/364 (60%), Gaps = 7/364 (1%)
 Frame = -2

Query: 1212 SETDVLCIGPCFASMAEDFFVDLRDML-AXXXXXXXXXXXSARLPLLRFKFEGISVNLYY 1036
            S+ D LCIGP FAS+AEDFF+ LRDML +            A++PL+RFKF+GI V+L Y
Sbjct: 67   SDIDALCIGPFFASIAEDFFISLRDMLKSRREVSELHCVKDAKVPLIRFKFDGILVDLPY 126

Query: 1035 GKIRTAFVPRVW--YNPFYLENIDEVSSRSLSGAFLVQAILRVVPNFKAYQSLLRAVRFW 862
             ++R   +P      NPF+L +IDE S +SLSG    + IL++VP+ + +QSLLR V+ W
Sbjct: 127  AQLRVLSIPNNVDVLNPFFLRDIDETSWKSLSGVRANKCILQLVPSLELFQSLLRCVKLW 186

Query: 861  AKRRGIYGKDVGFFGGVHLAVLAAFVCGRHPRCSLSVSVLIFFKTFAFWPWPKPVILTDG 682
            AKRRG+YG   GF GGVH+A+LAAFVCG  P  +LS  +  FF TFA W WP PV+L + 
Sbjct: 187  AKRRGVYGNLNGFLGGVHMAILAAFVCGYQPNATLSSLLANFFYTFALWQWPTPVVLLE- 245

Query: 681  VANLQPNDDLITRYKMPIQVPSITQNEYSYCGT--TRSTFTRIVKEFRKAYDKTLRLCGP 508
              +  P+        MPIQ+P      + YC +  TRSTF +IV EF   ++ T      
Sbjct: 246  --DTYPSTGAPPGL-MPIQLPC---GSHQYCNSTITRSTFYKIVAEFLLGHNLTKDYLKL 299

Query: 507  VFEWEDIFKPFSYAKEFEFFLKICLSSTNQEELNEWVCHVKSRFSHLISILEEDVDICYP 328
             F W+D+F+ + YA  + +F KI LS+ NQE+L++WV  VKSRF  L+  +EE   IC P
Sbjct: 300  NFSWKDLFELYPYANTYTWFTKIHLSAANQEDLSDWVGWVKSRFRCLLIKIEEVYGICDP 359

Query: 327  DPRENTDIQLLKPNVVFHWGLISGGDDFSP-GSIKEAFMTNILS-EYDGPVGGMDLFKVE 154
            +P E  +    +PN+VF+WGL     + S   S+K  F+ N+ S  + G VG + L  V+
Sbjct: 360  NPTEYVETYTKQPNIVFYWGLQLRTINVSDIESVKIDFLKNVNSGSFRGTVGRIQLTLVK 419

Query: 153  RSGL 142
             S L
Sbjct: 420  ASQL 423


>ref|XP_002882480.1| polynucleotide adenylyltransferase [Arabidopsis lyrata subsp. lyrata]
            gi|297328320|gb|EFH58739.1| polynucleotide
            adenylyltransferase [Arabidopsis lyrata subsp. lyrata]
          Length = 507

 Score =  272 bits (695), Expect = 1e-70
 Identities = 157/367 (42%), Positives = 220/367 (59%), Gaps = 10/367 (2%)
 Frame = -2

Query: 1212 SETDVLCIGPCFASMAEDFFVDLRDML-AXXXXXXXXXXXSARLPLLRFKFEGISVNLYY 1036
            S+ D LCIGP FAS++EDFF+ LRDML +            A++PL+RFKF+GI V+L Y
Sbjct: 93   SDIDALCIGPFFASISEDFFISLRDMLKSRREVSEVHCVKDAKVPLIRFKFDGILVDLPY 152

Query: 1035 GKIRTAFVPRVW--YNPFYLENIDEVSSRSLSGAFLVQAILRVVPNFKAYQSLLRAVRFW 862
             ++R   +P      NPF+L +IDE S +SLSG    + IL++VP+ + +QSLLR V+ W
Sbjct: 153  AQLRVLSIPNNVDVLNPFFLRDIDETSWKSLSGVRANKCILQLVPSLELFQSLLRCVKLW 212

Query: 861  AKRRGIYGKDVGFFGGVHLAVLAAFVCGRHPRCSLSVSVLIFFKTFAFWPWPKPVIL--- 691
            AKRRG+YG   GF GGVH+A+LAAFVCG     +LS  +  FF  FA W WP PV+L   
Sbjct: 213  AKRRGVYGNLNGFLGGVHMAILAAFVCGYESNATLSSLLANFFYIFAHWQWPTPVVLLED 272

Query: 690  TDGVANLQPNDDLITRYKMPIQVPSITQNEYSYCGT--TRSTFTRIVKEFRKAYDKTLRL 517
            T       P         MPIQ+P      + YC +  TRSTF +I+ EF + ++ T   
Sbjct: 273  TYPATGAPPG-------LMPIQLPC---GSHQYCNSNITRSTFYKIMAEFLRGHNLTKDY 322

Query: 516  CGPVFEWEDIFKPFSYAKEFEFFLKICLSSTNQEELNEWVCHVKSRFSHLISILEEDVDI 337
              P F W+++F+ + Y   + +F KI LS+ NQE+L++WV  VKSRF  L+S +EE   I
Sbjct: 323  LKPNFSWKNLFELYPYENTYTWFTKIHLSAANQEDLSDWVGWVKSRFRCLLSKIEEVYGI 382

Query: 336  CYPDPRENTDIQLLKPNVVFHWGLISGGDDFSP-GSIKEAFMTNILS-EYDGPVGGMDLF 163
            C P+P E  +    +PN+VF+WGL     + S   S++  F+ N+ S  + GPVG + L 
Sbjct: 383  CDPNPTEYVETYTKQPNIVFYWGLQLRTINVSDIESVETEFLKNLNSGSFQGPVGRIQLS 442

Query: 162  KVERSGL 142
             V+ S L
Sbjct: 443  VVKESQL 449


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